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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0011200 |
| Transcript ID | LotjaGi5g1v0011200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GTPase obg; TAIR: AT5G18570.1 GTP1/OBG family protein; Swiss-Prot: sp|Q851Q6|OBGC2_ORYSJ Probable GTP-binding protein OBGC2; TrEMBL-Plants: tr|A0A1J7HST2|A0A1J7HST2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0011200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:2572397..2578694) extracted from Lotus japonicus Gifu genome v1.2.
TAGTTTCTCCGATGAAAGACAGTCCAAATCCTCGATCACAGATTAAGCGGGATATAACGGGTTCGGGTCGCGTGTTTCTC GACACCCACTTCAACATAAAATTGGGTGTGTAATGCTGGAATCAATCCCACCAAAAAAAGAAAATTCATTGTTGGGCATA GTTCAAGATAATATAGCCCAAGTTTCAACTCTAGTCATATCTTCTTCTTCCTCAATTATCTTTTTTCCGGATAATGGTAT CTCTGACTTCTCCACCCTCATTCTGCAGAATCCAATTACAGGAAACTCGCTTCTTCTCCACTCCATTGCTTCCACCATGG TAACAATTATCAACCATCATCACTCTACTCACTCTTCTCTCATTTCCTTCAAGCTTCTTCTCTCTGTTATCTAACGGTGT CGTTTTATGTTTGTCACGCACAGTAGCAGAATCGAATTCCCAAACCCTAAATGCAAAACTGTGGTGGTAGAATGCAGGGT CACGAGCGCCAACAACGCTTCTCCACCGTCCACAGCGTTGGCGAAGGAGCCTCACAAGTATTTCGACCACGCAGTCATCA CCGTTCGCGGCGGAGACGGTGGACACGGCGCGGTGCTGAACCAGAAGGTGAAAGAGGAGAAGGAGACGAAGAATTGGAAG AAGAGTTCTTTCAAGAGGGACTTTGACGGTTCCATCGTGCTCCCTTTGGGTGGCCATGGAGGGGATGTGCTTGTGTACGC GGATGAGTCGAAGGATACGTTGCTGGAGTTTCACAACAAGGGTCGGTTTAACGCGAAGCGTGGTGGCAATGTTGATGCAA TGGGACTCTTGACCTCGCACTTGCGTGATGGACTTGCTGCTCCTACTCTGCGTATCGCTGTTCCTCTAGGTTTGTTCTGT GCTGTCTGCTTGTGTTTTGAACTGAACAATGTTGCCATGAAAATCCCATTTTGAAGTTTCCTCCAGTTCCTATTTATGGC ATGTATGTTTGGATCAATAGATTTTCCCTGAGAATCAATTATGGGAGAAGCTAGTCATATAAGTTTCTTCAAATAGTTGA TTTTAGCTTTTGAAATGCTATTAGTCTTTGCTATTAGACACACTTGAAAATTCAGGAAGTGTAGGTGGTGTTTGGTTTTA TTTTATCGAAGACAATTTGTTGTTGTTGCTGATATCTATCTAGAGTGTTTGGTTCAAACAGAGAAGTGGAGGGGGAAGGA GAGAAAAAATTGCAATGCTTCACATACTCTCCTCACTTCCTTTATTTTTTGACCAAATCAGGAAATTTGATTAAAAGCCC TCCCCTCCTCTTTATTTTCTTCCAACAAAAGTTGTAGTTAGTCCTTGCCATTATGCATACATGCTTGATTTCACCGTTTA TTTCACAATATATTGGAAACAAAAATTAGATGTCCTTTTAATGATCAGAAATGAAAATATCAACTAAAAATGAAACAAAA AGTAATCTGAATTTCACCTCGGATGGTGTTGGTTCATTCATTTTGAATCAATATGTTTTCAATACAACTAAAAAAATGTG ACATTATTGTGATTTTGCTTCCAATGGCAGAATTTGTGTGTGAAGGAAATTGCGAAAACAACATTTTGGTGTGAACACCC TCTAAAGAACTAAATCTGATCTTCCTTATCAAGTTTATAATTGTGACAGGTACAGTTGTGAAAAGCAAACGGGGGAAGAC ATTAGCTGATCTAGCACAACCTGGTGATGAAGTTATTGTTGCAAGGGGTGGACAAGGAGGGGTAATATACATATTTAAAA TTATTTCACAACCTATTGCTTTGGTAATTGAGTAATGAGCCTTGCTCTTTTAGTCCATATAAAGACATTGGTAGACTGTT CATTGGCATGCGATAATTTATGCTGTTTTAGATTTGTGACCAATGGAATAATTAGACCAAAAGATTTCTTACAAACATGT AATAAATTTTCATTTTTCGGCTCTTTAAATAAGGACTTTACACACACACGCACACATATTTTAGATAAGGGCACCTACAT TTTCCTTCAGTTATTATTTTTGTAATTGATACCTGAAACTAATTTACTTTTTGTCTGCCCAGATTAGCTTGTTAGAAATG CCACAGAATAAAAGGAAAAAGATGATGGCTTTGACAACTAATGTGATGCGAGATGAATCTGATAAGGTACAGTTACAGTC TATTGAGTATTTATGTTTGCACTGGAATATTTCCCTTGTTATCCCGGGTAAGATACAATTAGTGGCCCTTTATACTTACA ACTTACAATCTTCGCTTTGCAAATTGAATACCTTATACAAGGACTAAATCAACAGGGCTCTTCTCTCGTCGTACCAGTTT AATCAAAGTTGGTTTAACTTTTGCGATACATTATCAGTAAACAAATTTTTTCGTCTAAAATGCATGCTCATTTGTTTCTA TGTTTACTCTGAGCTTGGGACTGTGATTTAAAGTTATAAATTCTCATTTTGGGTTGTCAGGAAATTGAAAGTTATCTTGA GTCCAGAAAGAATTGTATTTGAACGTTCTCCATTTAGGTAGTTGCAATGAGATTCCACTGTGTATTAGCAAGTTGTGTTC CTATCTTACTTTGAGATAAAGATTGTCATTTAAAAATTGTTACAGGTTTTGGTTCACGGTCAACCTGGGGAGGAAGTTAA GTTGGAGTTGATCCTACGAGTTGTTGCAGACGTTGGTCTAATTGTAAGTGTTGCATCTTATGCATAATGCCTTATTTAAT TAGTAATGGTTTGTTCAACACTTCAACTTCTATCTATATAATAACTATGTCTCGAGTGTTGGTGAATGAACTTCAGTGTC ATATGTCTATGCCATGGAAGATTTCTGGAAATATTGATTTTACCATAGCTTAAAAAGTTATTGACGACTGTCAAAGATGT TGGGGTGGGGTGTAGTAAAGCTTCTTTTAGTTTTTGTTGTATGAAATAATTCTTTTGATTTTGCGAGCAAGGGTCCACTA TATATTGACTTTTTCTTACTTCTAATCCAAGTGAAATTTGTTGCCCTTACTGTAAAAAAGTTATTTATACCTGAATACTG CATTTTAGAAGGTCCTCCAGATGTTTTTACTCAATTGCTCAAGCTCAAGTTAATCTTGTTGTAGGGACTTCCAAATGCTG GGAAATCAACACTTCTGGCAGCCATTACACTTGCAAAACCTGATATTGCTGATTATCCTTTTACAACTTTAATGCCTAAT CTTGGACGCCTTGGTGGTGATCCCAGTTTGGGGGCCGGTATGTATTCTTCTGAGGCTACATTGGCAGATTTGCCTGGACT TATAGAAGGTGCTCACTTGGGAAAGGTATCAAATATGTATAACTTATTTTCAGTTTATTTCAATAAGTTTCTCAAATCAG GTTATGAATATGCGCTTATGCGATCAGAGCTTAATGTCATAAGCGCTTAATTAAGTTGTTTACCAAAACACACTATATAA TTTTTTTCCCTTGTTGAATCTCACTATTTTAAATCATGGCTTAGATATGTTCTTGGTTTCTGAAAATATGTCATTTTTTT AAATCAGTCCCTATTTGAGTTTTTTTTTTGGTTTTATTTTTTTTACATGTTAAAAAAATAGTATGTTTCTAAAAACATGT TTCTAGTCCTTGATGAAGACTGAAAACTCACTATTGTTGTTAAATAGAGATTAAAATTGAATACAAAATACGTTCTAATT TTTAAAAATACCATCTTTCTAGGGAGCAAAAATATATTTAAGTCATAAACCACATAGATGCTAAATATGAAAGCTTTTAT CTTTCAGGGTCTTGGCCGCAATTTTTTGAGGCACCTAAGGAGGACCCGACTGTTGGTCCATGTTGTTGACGCAGCCACCG AGGACCCTATAAATGATTACAGAACTGTCAGAGAAGTATGTATTTTGGCTTTTGTGATTGATTTTTTTCCATTCAGATTC GAATTTTTTGTTGGTTAAAAGGCTTTACTTGAAGTTGTAGTTTGTTTATTTAAGGCCCTTAAAGCTCGAATCTAATAACA ATTAGTAGGGAGTTTACTTGGACAACTGAAATTTTTAGCTCTGATTAGTTTTCTCTTAAAAATCATCTTTTTGTAAGTCT TATTAAGATGTTGGGTTGTCGATGATCACAGCTCTGTTGTTTGTTGTTTCTTCTCCCTTTGTTATCCTTTGAGATTTTGA GTCACAAGCAGGTTAAGTAGTGCAATAAATGTAGTTAGATTCATGTGCAGGATGTAATCTGTGGTCATACCAGCTTATCT TTGTTGTAATGTGTACGGTGTACCCCCTTATCTCTTCAAGTCTTTAATCTTGTTCATGATCTCTCCATGATTATTCTGTT TTGCAGGAGTTGCGCATGTATAATCCTGAGTACCTTGAACGACCGTACATTGTTGTTTTAAATAAGATTGACCTACCAGA GGTATGTGGTTTCCTACTCCCAGCCTGTATTTGTGTGTTATTATCTTTTAAGTTCTTATTTGTTAGGATCTGAAAATCCT AACGGCAGCCACATGTGAAGGAAGAGAAGGGATAATTTTTTGTATTTTTTTTAATATTTATACTAGAAAATAAATGCTGG AAAATAAACAAAGGTAAACCTTCTTGCAAGGGAAAATCCCTTCCAAGGGTGAAACCCTTTTACAACTCAATACTCAAATG ATGATCGAATTCTAACCTAATGAGGGTAACCCTATTTATAATTAATCCTAATAACGATAAACTTAACCCCTAAGAAATAA AGAAGATAGACTAACAAAAATAAATGATAACTCCTTAATTTAAAGATACTCTTAATATAAAAGATAACCCAACAAAAATA AAAAGATCAACTCCTAAAATAAAATTTAAACTCCTAAAATAAACTAAACCTAGATATTTAGGATCCTAACAAAGGGAGGG TTAGTGCATAAGGCTCCCGTAATTGTGGAGACCATTGAGGGTGAAATGACAATTTTAATTGCAGTCTGCAACTGCAATAT AGAGGTTCTTCGAGTGCCTGCAACTGCATAGGAACCACAGTTGCGGCCGCATGAGCCTCATTTATTGGCAATTTCGCGCA ATTTCAAGAATCACAATGCTAGTGTGACGGCAACCATAATTTAAAAATCATAGGTCATAGACTCATAGGTAATGCATTAC CCTGGGAGGGGAGGTGCTGTATTGGTTACTAGGACCTAGGACAAATGGACAGCTAGAGTGCAGGGCAGCTACTTTACCAT TGTGCCTTGGCTCACCCTTTTTCCTATTGTCTTCTAATTTGTCAAAATTAAGTCAGGGAACAAAGTATTCACTTAACTTA CTTTTCAGGTAAAGGACAGGCTTCCATTGTTGACCCGAGAAATTCTGAGAATCGGCAACGATGGTGCAGCTTCTGAACAG AAAGAACAGTCTGAAGTTGCAGCTCAATTGTTGTCCGATGAAAGTGACAAGAAGGAAAGAACACTTGAGGACTATCCACT TCCTCTCTCTGTTGTTGGAGTTAGTGTTCTGTAAGTGCTTGACATTTTGTTCCATATTACTTTTAAATGTTTCTCTTACA GTTCAGACAGTTAGAGTAGACATTTTATATCCTACTTTTCATAGCACCGGCATTGGCATGGGTCAAAATTTCATATTGTT TCTTGCAGAAAGGGTATCAGGATTAAGGAGATGTTAAAGGAGATAAGGGCGGCTTTAAGGAAGTGCAAAGATTCTAATGA AGCATAGTTTAAGTGTGCCACCATGAGTTTTGCATACTATGCTTTGTCATATCTGGTAATTGCACATAAATCGGTTCTGA TATTATTTTGACTTTACCAGAGAATAAAGACCAAGAAAGTTACTAGTTGGTTTTAGAAAGTAAGCGTATAGCATCTGACA TGAAGTTACATCATTTGTAATAAAACTGTAAAAGATATATGTAATATCTACAAGTTATGTTACTAAGGTTGCAAGCTCCA TGCTGGCATGGTAAATTTTGTAGGATAATGATGCCTTACATGATGTAATTGTTCACATACATTCTCTCATTTGAAGTCTT AATCGTATAGATAAATTATTAGGACAAACAAAACAATGTACTCTTTTGAAAATTGAATTATGTACTCCAAAGGCCTCTGT TAAGGCTGTCTTACTTCTCTTCATTTTGCTATAAATTATATGGCTTGTCAATATTGTGAACATCAACCATATTTCCTTGT GCAACATGTTAATCGTTTTCATATACCTGGAATTTAGTGTCAATTTTGGTAGTTTTGCCTGCTAGAAGTAAAATGATGCT TACTAGTCTTTGCTTGGTTAGAAGACCTGGAATTTAGTGGAAATAAACCTTAGAATGG
CDS sequence (LotjaGi5g1v0011200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTATCTCTGACTTCTCCACCCTCATTCTGCAGAATCCAATTACAGGAAACTCGCTTCTTCTCCACTCCATTGCTTCC ACCATGTAGCAGAATCGAATTCCCAAACCCTAAATGCAAAACTGTGGTGGTAGAATGCAGGGTCACGAGCGCCAACAACG CTTCTCCACCGTCCACAGCGTTGGCGAAGGAGCCTCACAAGTATTTCGACCACGCAGTCATCACCGTTCGCGGCGGAGAC GGTGGACACGGCGCGGTGCTGAACCAGAAGGTGAAAGAGGAGAAGGAGACGAAGAATTGGAAGAAGAGTTCTTTCAAGAG GGACTTTGACGGTTCCATCGTGCTCCCTTTGGGTGGCCATGGAGGGGATGTGCTTGTGTACGCGGATGAGTCGAAGGATA CGTTGCTGGAGTTTCACAACAAGGGTCGGTTTAACGCGAAGCGTGGTGGCAATGTTGATGCAATGGGACTCTTGACCTCG CACTTGCGTGATGGACTTGCTGCTCCTACTCTGCGTATCGCTGTTCCTCTAGGTACAGTTGTGAAAAGCAAACGGGGGAA GACATTAGCTGATCTAGCACAACCTGGTGATGAAGTTATTGTTGCAAGGGGTGGACAAGGAGGGATTAGCTTGTTAGAAA TGCCACAGAATAAAAGGAAAAAGATGATGGCTTTGACAACTAATGTGATGCGAGATGAATCTGATAAGGTTTTGGTTCAC GGTCAACCTGGGGAGGAAGTTAAGTTGGAGTTGATCCTACGAGTTGTTGCAGACGTTGGTCTAATTGGACTTCCAAATGC TGGGAAATCAACACTTCTGGCAGCCATTACACTTGCAAAACCTGATATTGCTGATTATCCTTTTACAACTTTAATGCCTA ATCTTGGACGCCTTGGTGGTGATCCCAGTTTGGGGGCCGGTATGTATTCTTCTGAGGCTACATTGGCAGATTTGCCTGGA CTTATAGAAGGTGCTCACTTGGGAAAGGGTCTTGGCCGCAATTTTTTGAGGCACCTAAGGAGGACCCGACTGTTGGTCCA TGTTGTTGACGCAGCCACCGAGGACCCTATAAATGATTACAGAACTGTCAGAGAAGAGTTGCGCATGTATAATCCTGAGT ACCTTGAACGACCGTACATTGTTGTTTTAAATAAGATTGACCTACCAGAGGTAAAGGACAGGCTTCCATTGTTGACCCGA GAAATTCTGAGAATCGGCAACGATGGTGCAGCTTCTGAACAGAAAGAACAGTCTGAAGTTGCAGCTCAATTGTTGTCCGA TGAAAGTGACAAGAAGGAAAGAACACTTGAGGACTATCCACTTCCTCTCTCTGTTGTTGGAGTTAGTGTTCTAAAGGGTA TCAGGATTAAGGAGATGTTAAAGGAGATAAGGGCGGCTTTAAGGAAGTGCAAAGATTCTAATGAAGCATAG
Protein sequence (LotjaGi5g1v0011200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSLTSPPSFCRIQLQETRFFSTPLLPPCSRIEFPNPKCKTVVVECRVTSANNASPPSTALAKEPHKYFDHAVITVRGGD GGHGAVLNQKVKEEKETKNWKKSSFKRDFDGSIVLPLGGHGGDVLVYADESKDTLLEFHNKGRFNAKRGGNVDAMGLLTS HLRDGLAAPTLRIAVPLGTVVKSKRGKTLADLAQPGDEVIVARGGQGGISLLEMPQNKRKKMMALTTNVMRDESDKVLVH GQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADLPG LIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATEDPINDYRTVREELRMYNPEYLERPYIVVLNKIDLPEVKDRLPLLTR EILRIGNDGAASEQKEQSEVAAQLLSDESDKKERTLEDYPLPLSVVGVSVLKGIRIKEMLKEIRAALRKCKDSNEA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 47 | 475 | 429 | 5.7E-206 | – | |
| PANTHER | 47 | 475 | 429 | 5.7E-206 | – | |
| ProSiteProfiles | 66 | 256 | 191 | 40.258 | – | |
| Gene3D | 67 | 255 | 189 | 1.4E-32 | ||
| SUPERFAMILY | 68 | 224 | 157 | 7.19E-19 | ||
| Pfam | 70 | 254 | 185 | 1.2E-20 | ||
| Gene3D | 256 | 475 | 220 | 2.8E-47 | – | |
| ProSiteProfiles | 257 | 468 | 212 | 65.038 | ||
| CDD | 257 | 398 | 142 | 2.76937E-57 | ||
| Pfam | 258 | 385 | 128 | 1.7E-24 | ||
| SUPERFAMILY | 258 | 467 | 210 | 7.5E-43 | ||
| PRINTS | 259 | 279 | 21 | 7.6E-34 | ||
| PRINTS | 280 | 298 | 19 | 7.6E-34 | ||
| PRINTS | 315 | 330 | 16 | 7.6E-34 | ||
| ProSitePatterns | 317 | 330 | 14 | - | ||
| PRINTS | 332 | 350 | 19 | 7.6E-34 | ||
| Coils | 456 | 476 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi5g1v0011200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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