Domain Predictions — View

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PF01018

Source: Pfam

Description

GTP1/OBG

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0057889.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GTPase obg-like [Glycine max] gi\|356551819\|ref\|XP_003544271.1\|	Domains Coil G3DSA:2.70.210.12 G3DSA:3.40.50.300 IPR006073 IPR006074 IPR006169 IPR014100 IPR027417 IPR031167 PF01018 PF01926 PR00326 PS00905 PS51710 PTHR11702 PTHR11702:SF3 SSF52540 SSF82051 cd01898	19
Lj3g3v0397150.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GTPase obg-like [Cicer arietinum] gi\|502115632\|ref\|XP_004495251.1\|	Domains G3DSA:2.70.210.12 G3DSA:3.40.50.300 IPR006073 IPR006169 IPR014100 IPR027417 IPR031167 PF01018 PF01926 PIRSF002401 PR00326 PS51710 PTHR11702 PTHR11702:SF31 SSF52540 SSF82051 cd01898 mobidb-lite	18
Lj5g3v0144410.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GTPase obg-like [Glycine max] gi\|356564323\|ref\|XP_003550404.1\|	Domains Coil G3DSA:2.70.210.12 G3DSA:3.40.50.300 IPR006073 IPR006074 IPR006169 IPR014100 IPR027417 IPR031167 PF01018 PF01926 PR00326 PS00905 PS51710 PTHR11702 PTHR11702:SF3 SSF52540 SSF82051 cd01898	19
Lj6g3v1931780.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GTPase obg-like isoform 1 [Glycine max] gi\|356549083\|ref\|XP_003542927.1\|	Domains Coil G3DSA:2.70.210.12 G3DSA:3.40.50.300 IPR006073 IPR006074 IPR006169 IPR014100 IPR015349 IPR027417 IPR031167 MF_01454 NON_CYTOPLASMIC_DOMAIN PF01018 PF01926 PF09269 PR00326 PS00905 PS51710 PTHR11702 PTHR11702:SF20 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF102741 SSF52540 SSF82051 SignalP-TM_GRAM_POSITIVE TIGR02729 TIGR03595 cd01898 mobidb-lite	32
LotjaGi3g1v0036000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	GTPase obg; TAIR: AT1G07615.1 GTP-binding protein Obg/CgtA; Swiss-Prot: sp\|F4HSD4\|OBGM_ARATH Probable GTP-binding protein OBGM, mitochondrial; TrEMBL-Plants: tr\|G7I2N7\|G7I2N7_MEDTR Obg family GTPase CgtA; Found in the gene: LotjaGi3g1v0036000	Domains G3DSA:2.70.210.12 G3DSA:3.40.50.300 IPR006073 IPR006169 IPR027417 IPR031167 IPR035101 IPR036726 PF01018 PF01926 PIRSF002401 PR00326 PS51710 PS51883 PTHR11702 PTHR11702:SF40 SSF52540 SSF82051 cd01898 mobidb-lite	20
LotjaGi5g1v0011200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	GTPase obg; TAIR: AT5G18570.1 GTP1/OBG family protein; Swiss-Prot: sp\|Q851Q6\|OBGC2_ORYSJ Probable GTP-binding protein OBGC2; TrEMBL-Plants: tr\|A0A1J7HST2\|A0A1J7HST2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0011200	Domains Coil G3DSA:2.70.210.12 G3DSA:3.40.50.300 IPR006073 IPR006074 IPR006169 IPR027417 IPR031167 IPR036726 PF01018 PF01926 PR00326 PS00905 PS51710 PS51883 PTHR11702 PTHR11702:SF39 SSF52540 SSF82051 cd01898	20
LotjaGi6g1v0307800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	GTPase obg; TAIR: AT5G18570.1 GTP1/OBG family protein; Swiss-Prot: sp\|Q8L7L0\|OBGC_ARATH GTP-binding protein OBGC, chloroplastic; TrEMBL-Plants: tr\|A0A1J7H1V8\|A0A1J7H1V8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0307800	Domains Coil G3DSA:2.40.240.60 G3DSA:2.70.210.12 G3DSA:3.40.50.300 IPR006073 IPR006074 IPR006169 IPR014100 IPR015349 IPR027417 IPR031167 IPR036346 IPR036726 MF_01454 NON_CYTOPLASMIC_DOMAIN PF01018 PF01926 PF09269 PR00326 PS00905 PS51710 PS51881 PS51883 PTHR11702 PTHR11702:SF31 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF102741 SSF52540 SSF82051 SignalP-TM TIGR02729 TIGR03595 cd01898 mobidb-lite	37
LotjaGi6g1v0307800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	GTPase obg; TAIR: AT5G18570.1 GTP1/OBG family protein; Swiss-Prot: sp\|Q8L7L0\|OBGC_ARATH GTP-binding protein OBGC, chloroplastic; TrEMBL-Plants: tr\|A0A1J7H1V8\|A0A1J7H1V8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0307800	Domains Coil G3DSA:2.40.240.60 G3DSA:2.70.210.12 G3DSA:3.40.50.300 IPR006073 IPR006074 IPR006169 IPR014100 IPR015349 IPR027417 IPR031167 IPR036346 IPR036726 MF_01454 NON_CYTOPLASMIC_DOMAIN PF01018 PF01926 PF09269 PR00326 PS00905 PS51710 PS51881 PS51883 PTHR11702 PTHR11702:SF31 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF102741 SSF52540 SSF82051 SignalP-TM TIGR02729 TIGR03595 cd01898 mobidb-lite	37

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	12.50