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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0019700 |
| Transcript ID | LotjaGi5g1v0019700.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DA1-related 1; TAIR: AT1G19270.1 DA1; Swiss-Prot: sp|P0C7Q8|DA1_ARATH Protein DA1; TrEMBL-Plants: tr|A0A151RWT7|A0A151RWT7_CAJCA LIM and UIM domain-containing family; Found in the gene: LotjaGi5g1v0019700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:3725807..3733969) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTTGGCTTAGCAGAATTTTTAAAGGCTCTGAACATAAGGTTTCAGAAGGGCATTACTATAAAGAGGATGCAGATTA TTACTTGCCTTCAACTTCAGGGGTGAGTAACAGTGATAAACTTAAAACTGCTGCTTTCGAATGTTTCAGAAGTTTTGCTA GTGTGTTGAGAAATGGTGATGATTACTCTTCTGAAAAATTTTGGGTGGAAAAATTGTATAATGTTTTTTATGGGAATTTG AATGCAGGATGTTTGGACTGAGAACAATGATGAAGAAATCGATCGCGCTATTGCACTGTCTCTGGCAGAAGAAAATCAGA AACCAAACCGTGTAAATGGTGAGTGATATAGCGCTCAAATATTATTGCACATCCATGAAAGGACGCCTTATATTCCTGTG CATTTGTTTGAATCTTTACTGTCAGAGGAACAGCTTGCCATGGCCTAATGCCAATTCGTTTTTCCATTGTCTTATGTGAA GTTTGATATGAGATCTGTTGGTCAAATCATTTGATAAATGAAGAAACCAATTGCTTCTGTTGAATGTATTGCTTAAATGT CACCGGAAATGTGGTTGCTATGCTTATCCTTGCATGAATTATATGCATTTTTATATTTTATATTGCTTGCTTAAATGATA GCTTGGATTTAAACTATGTACTCGTTTCATTCTTCGCCAATTTCATGTGTTAAGACTTAAGAAATTGGAATTGATCTAGT ATCTAGTTGACTCTAAAATTTACACACACAAAATCCCCCCCGGCCCTAACCACTATAATCTTTGTCTAGATAAGCGCCTG CCTTAAGATTAAATGTATTGTATTGCTGTTTTACATTAACTTATTTTTCTGTCTATCTGATAGACTACAGATCACAATTA GAAGATGACGAACAACTTGCTAGAGCCATAGAAGAAAGCTTAAATTTGGAGCCCCCTCCTAGACATGGAAATGAAAACAT GTATCAACCAGCTCATCAACCAGTTCAGTATTTCCCAATGGGATACAGGTATCGTTAGACACTTTTTTGTTTGACTTCTT CAATGGGCATGTTAAGAGTATCGTACATCGACTCTAACACGAACACCAGACACGACACGACACGGACACCGTGACATGAC TAAAATCCAAAAATTAGTACACCGCTTATACATATATATTAAAAAAAAATCATAAATATGACATGAATATGTTCACCTTC TCAAAATTAAGACCAAGTTAGTCTTTTTTATAAAGAAAACATAAAACAATTTCCTCTGCCCTAGCCAATGAGCTTCAAAA AGAAAAAAACTAAGTCTCATTTTACAAAGTATGCATTTAATCTAAAAAAGAAAGAGCTTATCTATCTAATGGCTTTCGCC TCCTTCTTAATCATCATCATTTAAAAATATAGACTCTAGCTCCAGTTTATCAAATGACAAAGTAGCAACTTGAAGGATTT CACTAATTCACTCTCATCAAGTAATCCAAACTCATCTCCCGCTATATCTCACTTGTTAATTTAAAATACAAGATATTATA TTGTTTGACTTAAAAAAGTTAATATCAGTGAGTGCCCCACAAGTGTCTAGCCAATAAGAGGTGTTTGGCTTCAAGTGTCG AGCTGAAGATTTTTTTTTACTCCGACACTGACAACAGGTGTCTGACACCAGAAGTATGGGTACCGTACGTTTGTCAGTGT CGTGTCGGCGTCCGACACCGGTACACACCTTCCGTGCAACAGAGCTATGCACCCTTCCTGGTTCTATCCGTTCTCACCTT TGTATGCTCTGCCACTGTTTGATTGTTTGAAATTCTTTATTTTACTATGTTAATACCCCTTGGTTGGCCATTACCATATT TTCCTTGTGATGCCCACTTTTTTCGTCCATACATTTAACAAAATAGTCTTGTTTTAGTATCTTCCCAGGGTGCTTAGGAC TAAAAATATGGATATTTGTATTTTTAAGAAGTGAAAATTAAAACAAATTAAAGAGGGACTGTTCTGAAAATCGTTATACT TTTAGGGATCCAAAACGTATTTAAGCCAATTGTTAACTGATCTCATTATGGATATTCTTGGCCGGAAGGGTTTGATGTAT AGAGGATGTGGTAGTCTATCACATCAATTTCATCCTTTTTCTCCTCTTCAAATAACTTGCACCAAGCATATCATAATGAT AATTACATTACTTGAGTGAAGACTGCTTTACTAAAACTAATTAAAAGCCAAGTATTAATATATACATCTAGAATCTTGAT CATTATGGATGTAGCAATAAACAATTAACCATGGGTTCTTATGGATTAAGCTCCTCATGCAAAGAAGGGATATGATGATA TGTTGGGTTGGATGAAAGTTTTATCTCAGTGCGCTTATAAACAAAGGGAGTAAACATCTAATCTATATTTTCCTTTTTTG TTTTCAGTTGATGGAGAAATTATTTTCTTTCAATTTGCTACTATGTTTGAACATCAGTTATGCTGTTATACAGACATAAT ATATTTGTCTAGTTATTTTCATAATAGGATTTGTGCTCGCTGCAATATGGAGATTGGTTATGGACGATATCTAAATTGCT TGAATGCATTCTGGCATCCTGAATGCTTCCGCTGCCGTGCTTGCAACCTACCAATCACTGATTATGAGGTGAGCTTCCAC GTTGCTTGTTTTCATTCATGGTTACATAAAGTTTTTTTAGTTGTGGCGTTATTTTTACTCACTCATATACTTGATTTTGT AGTTCTCCACATCTGGGAACTACCCTTACCATAAACCATGCTATAAAGAAAGCTACCATCCGAAATGTGATGTCTGCAAG CACTTCGTGAGTATTTCACCTTAACATATTTTTATTCTTGCTTATTATACCCGATATGAATAGTGTTTACTTTTCCCTTT ACTTAGTAACATGTAAAAATGGATAAGGTGAATAGAATAAGCTATTTCGAGAATAACCTGTGGGAGCTATATATTATATG AGTGTTGTCACGACCCAAAACTTAAGCCGTGACCGACGCACATACATTACCCTAGCCTGGGAAGCCTATCTTCACATAAC TCATTTCCTCAAGATAGCTACACAAAAACAATGGCGTTTCTAACTTAAAAAAATTCAATAGGGCTTCCTCTGTATTTTCA ACATTTCCAAAATATAACAAGACCTGCCAATATGATTCACATCCAGCTAGAAATCCAATGATACATATCCAGAATTCAAG TGGTGACATACTCCAATACACCATAAGTTTTGCACTTTACAAAATAAGACCACCACAGCAAAAAGATCAACAAAAGATAT CAAAATGGCCAGCAGCCAATGGAAACCTACCAAAAAGGATTAACTGGACAAATCGTATCTGAATATCTGAAGCAGCCTCC TACTCAGCTGCCTGGGAATCTGTAATAGAAATTAAGGAGGGGGTAAGTCACAGAGACTTAGTGAGGGCCTATCAACCACC ATGAACTGGAAGGGGAACATCATAAGCACGAATTGTTTTTCTTTAAAACTCTGGGTACGTATGACAAATGATCAAATCAA GTAATCCAAATCACTTACAGAAAAACATATATATTACGATTAAAACTTCATGCTTTACTAGCTCAAGGAAATATCGCATT AACACAGTGAAAACTTAAAGAATGAGGTTGAATCATTCCAATTTATAAATGCAAACAAAATCTGATAATTTAATACACTA GGGGTCACACATGAGAGAACGAGAATCATGAGGTGGCTCCATCTCGTTGATAGCTCTTTCCTCCTACGGGGTGACCTTTC CCCTAGGGGCGGCTCCATCTAACTGATAGCTCTTTCATTTCTCATATCATATCGTGTCATCAGGGGCAGCTACATCTCGC TGATAGCCCTTTCCTCTTAAGGGTCAACTTACCCATGGGGCTCCATCTAACGGATAACCCTCTCCACTCGGAATCTTGTC ATATCTCATCAATCTCATTGGGAGCATCTGCATCTCGCTGATAGCCCTCTCTTGGCATTGCTGGTTCCATCTAACGGATA GCCCTCTCCTCCCGGGATCAAATAACTAGGTGCACCTAGGCAATTAAACCTGTTAACGGCTACAAAGTTCTAACATGGAT CCCCCAAATCAATCATTCAAAACCATGATCGAACCCATATCAAAGTTTCAAACATGATTGTTCTCCATAATTATCAAAGC TCTTTAAGATGGCATCCTCAATTTCACATTATTCAATATTCAAAATTTGTAACTTCATGGCTTGTAACAAATTATAAACA TTCTCAAATTTATTTATTCAAATGCATAACTTTGAAGAACTCAATCAAAAGATAGCCATGTGGATGAAAGGATGTTCCCT CCAAATTTTAAATAAATAGACAACTTCTAGTTTTAATAAAATAGTCAAAATAGTAAACATAGAGTAATTAAAAATATACC ACAATGGTCATAAACCACTCACAACTATGAATGAACAAGAAAAGTGCTCCCTACAACTTCAAGATACCCGGATGAGCTAG TGGCTGGCAAATCTGAACACCAACAACAAATTTCAAACCTTTAGGAACTGAATTTAATGCTCTATTATCAATGAGCAATC ATGAAATCCCCAAATGTGAGCTCAAATCCCTAAATAATTTTTGGGTTGTGAATATACCCCAATGAGCTCAAGTGAACACT CTTTATGGGGTGGGTACTCTTCTCCAGCTTCCCACTTGAAAGATCAAATTTATCTTCAAGGTGAGATTTTGGAGGGGAGA AAGAGAAGATTGAAGAAGAAAAAGGGAGGGTATTGTTGTTGCAGAAGAAAGGAGAGAGAAAGAAAGATGGAAGAGGTCGT GAGTCTTGGGAGGAAAAGAGTGAGAGAGAGAGAGAGGGGAAGTCTCGATGGTTCTTTTAATTTTGTGGGTGACTTTTTTT TTTGGTTAAGTGGAACGGTGCGTTTCATGTATCTATGTTAAATGCAAATAGTGTTAATAGGTTGTTTTCCTGTTCCCGAC CTGTTTGGTGTGTCATTAATGTGAACAAGCATGAAGTATATCAAACTTCAATTGTCTGGGAATATTAGTACTTATCCTGA CTTTCATAAGCTTTATCTTTATTTTTCTTCTTTTTTTATGCCTGCAATTGGAGCAACTGGGTGCATCATTTCTATTAGAG GTAGCATTAGAGTTGTACTGAGTGACAATGTTCTTAAACTATTTGATTCATTATTTTTCTCATGATCAATTTCTCTTTTC ATGAGATTTTTTTAATAGTCTCTGAGCAATGGTCATGTTTAAATGCGTCAACTAATATCGGTATGAAAGTGTTTCTTAAA GAATACTTGCCCATAGGAACTATATGCCCACATTATATAAGTGTCTCACTATTCAGGATGTGTAAGATGTTATATCATCA AAGTTTGTGGTTCAAGTTCTTGTAGATGCTTTTTTTTTTTCTTACTGCAAATTATCATGGCAGTACCGCAGTAGTAGAAG GTGCTACCGGCATCATCCTGTTGCTTTAAACTTGTGGACATTGAAGGGTCATTCATGATGTTTATAACTTTTCATATATT AGAATTAAAACAAAGACATGCTAGTTAGTTTTTATCTTGACTTCAGCTTTTTATCTCATTTTCTGTTGCTGTTAATTTTT GGTAATATATATCTTTTGACAGATTCCAACAAACCCTGCTGGTCTTATTGAATATAGGGCACATCCATTCTGGATCCAGA AATATTGCCCTTCTCATGAACATGATAATACTCCTCGCTGTTGTAGCTGTGAGCGAATGGAGGTCAGTTTAAATAAAAGT ATCTTAATCTGTTAAACATTACTTATAGGCTTGCCCAGGGAAAGGTGGATGAATTTGTATAATGAAAATTGAAAAGAATG TAATGGAAAAATTCTCTCTTCATATGCAGCCACGAGAGGCGGGATATATCCCTCTTAAGGATGGCAGGAAGCTCTGCTTA GAGTGTCTGGATTCTTCTATCATGGATACAAACGAATGTCAACCCCTTTACAATGATATACAGAAATTTTATGAAAGCCT AGATATGAAACTGGATCAGCAAGTTCCGCTACTGTTAGTTGAAAGAGAAGCTCTGAATGAAGCAAGAGAGGGAGAGAAGA ATGTAAGAGTTTTATTATTGATAGCTTTGAGAATGCTATTCTCTATGGTGATGAGTTAACCGCATACCACTTCAAATAAA TGATTCACTTTTACATGCATGATACTGGAAATTTCGGAGCAAAACGGATACAAACAATTATGTTCATGTTTAGAAGCTTT AGCTTGTAATAAATATACTTCCCTAGTCAATGTGCTCTCAAATAAGTCTTCAATTCATATTTTGTTCATGGTTAAAGCAA GATCTTTTCCTTTATCTTATTTGATTATTAATTTTGGGCAGGGTCACTATCACATGCCTGAGACCAGAGGACTCTGCCTC TCAGAGGAACTCAGCACTGTAAGATTCCCTGTTATGTTAGTGATGACATTTGTTAAGAATCAATAATTAGAAACTCATGG AGTATTGCATTTAAATTTGATCAGATTTCAAGACGACCAAGACATGGGAAGGGAAATAGGGCAATGGACCAGAGAACACA GCCCTACAAACTGACTGCACGTTGTGATGTGACAGCAATTCTCATTTTATATGGTCTTCCAAGGTAATTATTCAATGCTT TTGGTTTTGGTTTTATAACTAGCATTAGTTGGAGACAAGGACAAAAGCAAATCTATAAAACAAGATGAAAATTCAAAATT TCCTTTGGATGAAAATAACTTAGCAAATGACAGATGAAACCATAAAATTTAGTGTGTCGAGTTGCATAGACCCAGATGAT ATTATACATTTGGAAAAAGCATAATCTATGTGTTACTTAATCTAAGGGAGTCGAAAATAACATAAACAAATAAAAAAAAG CTAAAAGTTGCAAATTGTAATTTGCATTTTTCTTCCCCCCCTTAGTGTTATCCTTGGGTTTATTGTGTTGTTTTCAAATT AGAAAAGGAAGTTGATAAAAAGAAGCAATATTGCAGCCAAGCATGCTTTGCCTTGTTGATATTGGATTATTTAGTAATTC TTCTTTGCATGCGAGTTTCTCCTAGGTATATTTGCTTCTTTGGAGAGAGAGGATTTCCCCCTTTATTTTACACCAATATC TTGGTTTTAGTCATTTGGTTGGCTGAATCATTTTACACATGACTGCAACTCTTTTACAGGTTGCTTACTGGGTCAATCCT AGCTCACGAGATGATGCATGCATGGCTGCGGCTAAAAGGTACTATTTCATCATAAGGAAATTATTTTGTTGGGATTATCT AGAAAGTCCTTGCAGTTGGAGGGTACATTTTCTTGGTTATACCATTTGAAATGTATCCATTTTAGGATTTGTGTCCTCTA AATTGAGGACGTCCCTTTCGAATGTTGTGAAGTTAGCTATCACAAGTCACAACCGTTGATTGAGAAGTCAAAGGTTGAGA TTGTGATCATATGCTTGTACATGTATATACTAAAACATCTATAATAAAATGCCGAAAAAAGAGGAACATCCTCTCCAAGT TTGTAACCTTATGGTATATTTGGATACCCGTTGGCGCGCCAGTGCTAACGGGCATTAGAATTAATTTCAAGATGCAAAAT TTGAACAAAATTCTTCATATGGATTGAGATGAATGTGTTTTCATATTAACTCAACTGGTATCCAATCACACACTTAGTGG TTGTTTAGATTTCTCAACCAATGGTTGTGACTTGTGATGACTTACTTTACCCTCTTAAATGACTCTTACTTTGGAGGAGC CAAATCCTCCGTTTTAATAGATGGGATTTGTCACCTATCATTAAGATAATGTGTCTCAGTTTATGTCAATTGCTGTGTAT ATGAAGGTGTTCGAACTCTGAGTCAAGATGTTGAAGAAGGTATCTGTCAGGTTTTGGCTCATATATGGTTGGAGTCTGAG CTATCTTCTGCACCAGCCGGCAACTTCGTCTCAACATCATCCTCACCAGCACCATATACATCTAAAAAAAGTAAAAGACC AGATTTTGAAAGGAAGCTTGGGGAGTTCTTCAAGCACCAGATTCAATCAGACATCTCCCCTGTTTATGGAGATGGATTTA GGGCAGGTCAAAAAGCTGTGCATAAGTTTGGCCTGCAAAGAACCCTTCACCATATCATGATGACAGGGAGTTTTCCATAC TAA
CDS sequence (LotjaGi5g1v0019700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTGGCTTAGCAGAATTTTTAAAGGCTCTGAACATAAGGTTTCAGAAGGGCATTACTATAAAGAGGATGCAGATTA TTACTTGCCTTCAACTTCAGGGGATGTTTGGACTGAGAACAATGATGAAGAAATCGATCGCGCTATTGCACTGTCTCTGG CAGAAGAAAATCAGAAACCAAACCGTGTAAATGACTACAGATCACAATTAGAAGATGACGAACAACTTGCTAGAGCCATA GAAGAAAGCTTAAATTTGGAGCCCCCTCCTAGACATGGAAATGAAAACATGTATCAACCAGCTCATCAACCAGTTCAGTA TTTCCCAATGGGATACAGGATTTGTGCTCGCTGCAATATGGAGATTGGTTATGGACGATATCTAAATTGCTTGAATGCAT TCTGGCATCCTGAATGCTTCCGCTGCCGTGCTTGCAACCTACCAATCACTGATTATGAGTTCTCCACATCTGGGAACTAC CCTTACCATAAACCATGCTATAAAGAAAGCTACCATCCGAAATGTGATGTCTGCAAGCACTTCATTCCAACAAACCCTGC TGGTCTTATTGAATATAGGGCACATCCATTCTGGATCCAGAAATATTGCCCTTCTCATGAACATGATAATACTCCTCGCT GTTGTAGCTGTGAGCGAATGGAGCCACGAGAGGCGGGATATATCCCTCTTAAGGATGGCAGGAAGCTCTGCTTAGAGTGT CTGGATTCTTCTATCATGGATACAAACGAATGTCAACCCCTTTACAATGATATACAGAAATTTTATGAAAGCCTAGATAT GAAACTGGATCAGCAAGTTCCGCTACTGTTAGTTGAAAGAGAAGCTCTGAATGAAGCAAGAGAGGGAGAGAAGAATGGTC ACTATCACATGCCTGAGACCAGAGGACTCTGCCTCTCAGAGGAACTCAGCACTATTTCAAGACGACCAAGACATGGGAAG GGAAATAGGGCAATGGACCAGAGAACACAGCCCTACAAACTGACTGCACGTTGTGATGTGACAGCAATTCTCATTTTATA TGGTCTTCCAAGGTTGCTTACTGGGTCAATCCTAGCTCACGAGATGATGCATGCATGGCTGCGGCTAAAAGGTGTTCGAA CTCTGAGTCAAGATGTTGAAGAAGGTATCTGTCAGGTTTTGGCTCATATATGGTTGGAGTCTGAGCTATCTTCTGCACCA GCCGGCAACTTCGTCTCAACATCATCCTCACCAGCACCATATACATCTAAAAAAAGTAAAAGACCAGATTTTGAAAGGAA GCTTGGGGAGTTCTTCAAGCACCAGATTCAATCAGACATCTCCCCTGTTTATGGAGATGGATTTAGGGCAGGTCAAAAAG CTGTGCATAAGTTTGGCCTGCAAAGAACCCTTCACCATATCATGATGACAGGGAGTTTTCCATACTAA
Protein sequence (LotjaGi5g1v0019700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGWLSRIFKGSEHKVSEGHYYKEDADYYLPSTSGDVWTENNDEEIDRAIALSLAEENQKPNRVNDYRSQLEDDEQLARAI EESLNLEPPPRHGNENMYQPAHQPVQYFPMGYRICARCNMEIGYGRYLNCLNAFWHPECFRCRACNLPITDYEFSTSGNY PYHKPCYKESYHPKCDVCKHFIPTNPAGLIEYRAHPFWIQKYCPSHEHDNTPRCCSCERMEPREAGYIPLKDGRKLCLEC LDSSIMDTNECQPLYNDIQKFYESLDMKLDQQVPLLLVEREALNEAREGEKNGHYHMPETRGLCLSEELSTISRRPRHGK GNRAMDQRTQPYKLTARCDVTAILILYGLPRLLTGSILAHEMMHAWLRLKGVRTLSQDVEEGICQVLAHIWLESELSSAP AGNFVSTSSSPAPYTSKKSKRPDFERKLGEFFKHQIQSDISPVYGDGFRAGQKAVHKFGLQRTLHHIMMTGSFPY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 475 | 475 | 1.5E-262 | – | |
| PANTHER | 1 | 475 | 475 | 1.5E-262 | – | |
| ProSiteProfiles | 40 | 59 | 20 | 9.521 | ||
| SMART | 40 | 59 | 20 | 0.09 | ||
| Coils | 63 | 83 | 21 | - | – | |
| Gene3D | 67 | 244 | 178 | 1.5E-20 | – | |
| SMART | 71 | 90 | 20 | 0.48 | ||
| ProSiteProfiles | 71 | 90 | 20 | 9.657 | ||
| SUPERFAMILY | 107 | 140 | 34 | 2.35E-7 | – | |
| ProSiteProfiles | 113 | 173 | 61 | 11.623 | ||
| SMART | 114 | 166 | 53 | 2.4E-9 | ||
| ProSitePatterns | 115 | 149 | 35 | - | ||
| Pfam | 115 | 169 | 55 | 2.1E-8 | ||
| CDD | 115 | 167 | 53 | 2.16182E-27 | – | |
| SUPERFAMILY | 141 | 195 | 55 | 4.28E-5 | – | |
| Pfam | 265 | 470 | 206 | 2.0E-91 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0019700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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