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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0058100 |
| Transcript ID | LotjaGi5g1v0058100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Octicosapeptide/Phox/Bem1p domain-containing protein / tetratricopeptide repeat-containing protein; TAIR: AT2G25290.1 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|K7TQE3|HIP_MAIZE HSP-interacting protein; TrEMBL-Plants: tr|A0A072VDJ0|A0A072VDJ0_MEDTR Octicosapeptide/phox/Bem1p domain protein; Found in the gene: LotjaGi5g1v0058100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:9779213..9785001) extracted from Lotus japonicus Gifu genome v1.2.
AGCCAGCCAGCCACCCCACTCGACTGCCTTTTGTGTTGTATCTTATCGTGTCGTTTTGCGCTTCCCCCCAATTTTAGGCC ACTCCCTTATTCCTCACCACAACACCAAAAAAAATACCACACCCCTTCTTCTTTCTTCGTTGACTTCTGGGCAAAGAAAC CCTAAGCACAAGAGGAAAAGAAGGAGGGAAATCAAATAACAATCCTCATAATAATCATAATCATTCCATACAAAATTCAA CAATTTTCCATCCACAATCACAATCACAATCTCTCTGTTTCTTGATTTGATTGATTCAGCAACCGATGGGGAAACCGGCA GGAAAAAAGAAGGATCATGAAATCACCGCCACCGCGAAGGGCAACAACAACAACAACAACACTAGCAAGAAAGGTTGGGA ACGCGCTGCCACCGCCGTGGCGTCGTCAAAAGCCGCGGCTCTCGACGACGACACGGCGATGTTCATAAACATGTCGCAGG AGCTGCGGGAAGAAGGGAACCGTCTCTTCCACAAGAAGGATCACGAAGGCGCGATGCTCAAATACGAGAAGGCATTGAAG CTTCTCCCCAAGAGCCACATCGATGTGGCTCACCTCCACACCGCCATGGCCATGTGCTACATGCAGCTAGGGCTCGGGGA GTATCCTCGTGCTATTAACGAGTGCAATCTTGCGCTTCAGGTCTCGCCTCGTTACAGCAAGGCCCTCCTGAAGAGAGCAC GTTGTTACGAGGCGCTGAACCGATTGGATTTGGCTATGAGGGATGTGCGCGTTGTGCTCAACTCCGAGCCGAATAATCTC ACCGCGTTAGAGATTCTCGATAGCTTGAGGGTTACCATGGATGAGAAGGGGATCACCTTGGATGAGACTGAGATTGCCCT GGCTGCTTTGCAGCAGCAGCCGGAGCCTCCCGGGGCGCGGTTGAGGAAAGTGGTGAAGGAAAAGTTGCAGAAGAAGAAGA AATCATCACCTAGAGGGCAAGAAGATGAGAAAACAAAGGTGGTTGTTGAGAATGTTAAGGTTCATAAGGATAAGGATCAC AACAAGGATAAGAATGTAAAGGTTGAGGATAAGGATGATAAGGAGTTTGTTAAGAAAGATAAAGGGGTTACCAGGACTGT GAAGTTGATATATGGAGAGGATATAAGATGGGCGCAGTTGCCTGTGAATTGTAGCATGAAGCTGGTGAGGGATGTGATAA AGGATCGGTTTCCGCGGTTGAAGGGTGTTCTTGTGAAGTATAGGGATAGGGAAGGTGATTTGGTTACTATTACTACTACT GCCGAGTTGAGGTTAGCAGAGAGCTGTCATGTGCTTGGGTCAATTAGGCTTTATGTTACGCAGGTGGATCCGGATCAGGA ACCGTGTTATGATGAGACAACAACAAGTAGTAATAATGGTGACGTGGAAATGGAGAAGGGGGGTGTGAAAGGAAGCAGGA GTGTGGCTGAGAAGAAGACTACTGTGGAGGATTGGCTTGTCCAGTTTGCTAGGCTGTTTAAGAATCATGTTGGGTTTGAT TCTGAATCGTATCTGGATATTCATGAGGTTGGAATGAAGCTGTATTCGAAAGCAATAGAGGAGGCGGTGACGACCGATGA TGCTCAGGAGCTGTTTGAAATTGCTGCAAGTAAATTTCAAGAGATGGCTGCTCTGGCCATGTTTAATTGGGGGAATGTTC ACCTGTCCAGGGCAAGGAGGCGGGTTTCCTTTCCGGAAGATGGGTCAAGAGAGGCTTCTTTTGAGCATGTTAAAGCTGCG TATGAGTGGGCTCAGAAGGAGTACAAGGAAGCAGAATTGAAGTATGAAGAAGCTATGAGAATCAAACCAGACTTTTATGA AGGACTTCTTGCTCTTGGGTATCAGCAGTTTGAGCAAGCAAAGCTCTGCTGGTGTTATTTAATAGCAAGCAAGAAGGATT TGGAAGCTGGCCCTTTCGAGGAGGTTCTGCAGCTATATAACAAGGCAGAGGACAGCATGGAGAAAGGCATGTTGATGTGG GAGGAGATCGAGGAGCAGCGGTTGAATGGACTATCCAAATCAGATAAATATAATGCAACGTTAGAAAAAATGGGTTTGCA GGGTCTTTTCAAGGATGTTTCTTCTGATGAAGCTGAGGAAGAGGCTTCAAGGATGAGGTTGCAGATATATCTTTTATGGG GCACCTTATTGTACGAACGATCTGTTGTGGAATATAAACTAGGACTACCAACATGGGAGGAGTGTTTGGAGGTTGCAGTT GAAAAGTTTGAACTAGCTGGAGCTTCTTCAACTGACATTGGTGTCATGATAAAGAACCATTGTTCTAATGAAACAGCAAT GGAAGGTACAAGATTGGGAAATGTGTTTCTCAGATTCCTTCTTTTAAATATTTCAGGGAACTAACAAATCAATTTTCATA ATTACAGGGTTCAAAATCGATGAGATAGTGCAAGCATGGAATGAGATGTATGATGGGTGGCAGTTTGATGTTCCATCATT TAGACTTGAACCTTTGTTTCGCCGGCGTGTTCCAAAACTCCATTACATCCTGGAGCAGTTTTAAGTTATCTTCTTGTGTT GGTTATTCTTTATAGAAGCAAAATCAGTGCTTCTATTTCTTTTCATAATATTTTTGAAGGCTTCTTCATTCCTTCCACAG ACAGGTAAGTAAGACTATGCTTGTACTATAGTTTTGCTTTCATGTTCCTATTGCATAAGATCTTCCAAATTGTTATAGAA AGTTTAGGGAGATTTGGTTGCATTTGAAATTTTTAAAAGCTTATACCTTTTACTAAAATTATAGTTTTATGAATAATAGA ATGCTATACCAAGTCTTTTCTGTTGCTAAGAAAATTTAGTGTATCTTTCTGGAATCGCTCTTGACTGGAATTATCTCTTA ATTCTTTTCTCTTCTTAGGCTCTTAAAGTTGAGACAATAATTTCTGTATTCAGAAAACAAAGGAGAGTTTATTTAAGAAT ATCTCTATTCTTGGTAGTAAATATAGTAAAAATTTGGAAATTTTTATTTATCCAGATAGAGATAGGTATACCTGATCGTA TCCTAGAATAACTATGATTGGCTGGATAAATAAACAATAATTGACAAATGATAGGTGCATGTTTCGTGAAATCACAATTT ATGCTGATGTCTTCACTCTTGAGTCTTGAGTACTGTCTTGTGATTTGGCTGGCATAAGCAAGAAGTTATTTGTAAGGCTT TAAACTAGTCAGGCTCCTAAAACGTTCTCAGCTACATTTCTGGGAAAAAGGATTATTATGCTCAAGTTTTTATTCATTTT TATGACATTATGTGAGAAATCGGTATTGTTTATGATTTAGGGTAAGTAACTAATATTACAATGAAAGACTTCTGGTCCAT GGGGTATTAGCCTTCTGGCGGAAACAGTTTGGGGATTATTAACATTGTCAATGGCCTTTGATATGATGTCCCTTTATGAA AAAAAAAAAAGAACAAGGAATATCAATCACAAACATAGAGTATAGTTGTGTTAGAATGTATTCTGTTAATAAGGACAAAT GTTCTGTGTAGAAGCTAGCCCATAGGTTAGTTTGTTAGAAGGGAGTGAGTGAAGGAGTTAGAAGCGGAGTAGAAGGCACT GGTGAGATAAATAGGGAGAAGTCAGATTAGAAAGGATTTATTCAGTACATTTTATAGATTGAGAGTGAAAGGAAAGATAA ACGAAACCCTTTTGGAGAATTGTGCTATTCTCCATTTCTTGATCAATTTTTCAATAATGCCATTCCATTGTTTTAATTAT TTGGGCCAATCTTTCATTTCTTTCTGAGTTCTTAACAATTTGGTCTGACCTGCTGGATTCCAAATCGGGGAGAAATGGTG TCTCGAGTAGAGGCTTTGGACCGTTATGTGTAGATGCTTCAGAAGGTATTCTGGGAAAATGGATCCTAGCTAGCAGGAAT TAAGATGAAGTTGGGTGGCCTCAAGTTTCAACCATATCTAGGCTATTATAGGTTGTTTGATGCAGAAGGGAAGAGATCCA GTGGAGAAGCGTTAATAGATGATGATGACAGTTGTTCTTAGGAGAAAAAGGTGGAAGTTGTAAGAATGTATTCTGTTAAT AAAGGACAAATATTTTGTTAAGAAGCTAGTCAGTCCATTAGCTTGTTAGTAGTTTGCTAGTAGGGGATAAGAAAGGATTG GTTCGGTAAATATAGGGAAGTTAGATTAGAAAGGATTCATTCAGTTCATTTGGTAGTTTGAGAGTGAAAGGAGGGATTCA TCGAGAAAGGGGAAAATCCTTGGAGAGAATTATGCTATTCTCCATTTCTTGTTCAATTTTTCAATAGTACCATTCCATTG TTTTAGTTTTCTTTCTGTCTATCTTTCATTTCTTTGAGTTCCTATCCTTACAACCAGAGACCAAGAGTGAAAAGAAGGCA AAAGTAGTGGATTTTATGCGTTGAATTTGTACTGCCAAGCTAGGTGATCTGTGGGTCATTCTTTTTAAATATAGCTCTAG GCGGTATTATATTTCTTTAAGTTGAGTGTTTTGGCTATTTAGTGAGTTATTATAAACTAGTTTGAAACTAAGAAGCTAAC TCAATTCAGCTCATTTCTCAAAGAAGATCATGTATATTTTAACTTTCAATAGATCTTGCGATGTCCTTCACATATTTTTT CAAATGGGGTTGATGAAGTCTGATGGTTTGAATTACTGTTATTGATATCATGATTCATGATGATGATGGTCATGGCTTTT CTGGAGGTGTATGGCTTCTGAATATAGTTTCCGCTTGCCAAGACTAAAATTTTCCCCCTCATCTCATCCCCTCCCTGGAA GAAATTGTTCACGTTTTTCGTTAGCATAAGATGTTGTTTGCTAGATTTTCATGGTTTGCTGAAATATGTGTATGACTAGT GGATTGACTAGCTAGAAACTTTCCACTTCATTGTAATTTCTTAAAATAATGATGACATCTATTTGGTTGGCCTGATCAGA TTTATTTTCCATTTGGTTGCAGGTATTTTTTCCTCCATACTTGTGAACTCCTTGGTGGGTGCAACCATTGGATTATGTTT GTTCGATATCAGTTTTGTATGAAGTTGGGATATCAGGCTAGAAAGCCTGGTTATATTTGTTTGTTTCCTGTTAGAAGGCT TCGGGTGTCATTTTTTGCAGTAGTAACATCAGTATATGATTCCATTTGTTGGTTTGGGGTAGTGAATGTTTGATTTGTTC ATTTTGCTAAAACGGTAAAAAAGAAAGTTTTCAATTTTGTTGGTTAGTTGGGGTTTGATGATTGTTGAAGTTGTCAAATG ATCATTTGTAACGTTCTGCCGGTGTTGTATAGCATACTGCATTTTTCATCACATATGGCAATTCATATCATCATATGTTT ACCCCTCCTTCCTCCCCCTCACACGAGTTTGGATTTACTGCCTTTAGGAAATTCCTAAATTCACATGGTCAAGGAATTAG AGTCATTTATCAAGATCGGACAGTTCAAGTTTTGAATTTATTTCAGTCGTTGGATCTTGATAAAACACAATCTGTTTGAT ATTCGATTGAATGATTCTAATTACTTGAAGGCAAAAATTATTTTTGTATATCTCTAATAAAATCTATCTTAATTTATTTT AAAAAAGTAAAATTAGCTTTTAATTTGAACAAAATCTGACATCTCCAAAAAGTAATCAAATAATATTAGATCATCTCCTA AGATAGTTTTAATGATAATTATTATGAATTAATAATAGAGTTTAATGGATATGCACTGAAAGTGTAAAATAGTTTTACAC AGTCATCCAATTAAAGCAAGCCACATAGG
CDS sequence (LotjaGi5g1v0058100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAACCGGCAGGAAAAAAGAAGGATCATGAAATCACCGCCACCGCGAAGGGCAACAACAACAACAACAACACTAG CAAGAAAGGTTGGGAACGCGCTGCCACCGCCGTGGCGTCGTCAAAAGCCGCGGCTCTCGACGACGACACGGCGATGTTCA TAAACATGTCGCAGGAGCTGCGGGAAGAAGGGAACCGTCTCTTCCACAAGAAGGATCACGAAGGCGCGATGCTCAAATAC GAGAAGGCATTGAAGCTTCTCCCCAAGAGCCACATCGATGTGGCTCACCTCCACACCGCCATGGCCATGTGCTACATGCA GCTAGGGCTCGGGGAGTATCCTCGTGCTATTAACGAGTGCAATCTTGCGCTTCAGGTCTCGCCTCGTTACAGCAAGGCCC TCCTGAAGAGAGCACGTTGTTACGAGGCGCTGAACCGATTGGATTTGGCTATGAGGGATGTGCGCGTTGTGCTCAACTCC GAGCCGAATAATCTCACCGCGTTAGAGATTCTCGATAGCTTGAGGGTTACCATGGATGAGAAGGGGATCACCTTGGATGA GACTGAGATTGCCCTGGCTGCTTTGCAGCAGCAGCCGGAGCCTCCCGGGGCGCGGTTGAGGAAAGTGGTGAAGGAAAAGT TGCAGAAGAAGAAGAAATCATCACCTAGAGGGCAAGAAGATGAGAAAACAAAGGTGGTTGTTGAGAATGTTAAGGTTCAT AAGGATAAGGATCACAACAAGGATAAGAATGTAAAGGTTGAGGATAAGGATGATAAGGAGTTTGTTAAGAAAGATAAAGG GGTTACCAGGACTGTGAAGTTGATATATGGAGAGGATATAAGATGGGCGCAGTTGCCTGTGAATTGTAGCATGAAGCTGG TGAGGGATGTGATAAAGGATCGGTTTCCGCGGTTGAAGGGTGTTCTTGTGAAGTATAGGGATAGGGAAGGTGATTTGGTT ACTATTACTACTACTGCCGAGTTGAGGTTAGCAGAGAGCTGTCATGTGCTTGGGTCAATTAGGCTTTATGTTACGCAGGT GGATCCGGATCAGGAACCGTGTTATGATGAGACAACAACAAGTAGTAATAATGGTGACGTGGAAATGGAGAAGGGGGGTG TGAAAGGAAGCAGGAGTGTGGCTGAGAAGAAGACTACTGTGGAGGATTGGCTTGTCCAGTTTGCTAGGCTGTTTAAGAAT CATGTTGGGTTTGATTCTGAATCGTATCTGGATATTCATGAGGTTGGAATGAAGCTGTATTCGAAAGCAATAGAGGAGGC GGTGACGACCGATGATGCTCAGGAGCTGTTTGAAATTGCTGCAAGTAAATTTCAAGAGATGGCTGCTCTGGCCATGTTTA ATTGGGGGAATGTTCACCTGTCCAGGGCAAGGAGGCGGGTTTCCTTTCCGGAAGATGGGTCAAGAGAGGCTTCTTTTGAG CATGTTAAAGCTGCGTATGAGTGGGCTCAGAAGGAGTACAAGGAAGCAGAATTGAAGTATGAAGAAGCTATGAGAATCAA ACCAGACTTTTATGAAGGACTTCTTGCTCTTGGGTATCAGCAGTTTGAGCAAGCAAAGCTCTGCTGGTGTTATTTAATAG CAAGCAAGAAGGATTTGGAAGCTGGCCCTTTCGAGGAGGTTCTGCAGCTATATAACAAGGCAGAGGACAGCATGGAGAAA GGCATGTTGATGTGGGAGGAGATCGAGGAGCAGCGGTTGAATGGACTATCCAAATCAGATAAATATAATGCAACGTTAGA AAAAATGGGTTTGCAGGGTCTTTTCAAGGATGTTTCTTCTGATGAAGCTGAGGAAGAGGCTTCAAGGATGAGGTTGCAGA TATATCTTTTATGGGGCACCTTATTGTACGAACGATCTGTTGTGGAATATAAACTAGGACTACCAACATGGGAGGAGTGT TTGGAGGTTGCAGTTGAAAAGTTTGAACTAGCTGGAGCTTCTTCAACTGACATTGGTGTCATGATAAAGAACCATTGTTC TAATGAAACAGCAATGGAAGGGTTCAAAATCGATGAGATAGTGCAAGCATGGAATGAGATGTATGATGGGTGGCAGTTTG ATGTTCCATCATTTAGACTTGAACCTTTGTTTCGCCGGCGTGTTCCAAAACTCCATTACATCCTGGAGCAGTTTTAA
Protein sequence (LotjaGi5g1v0058100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKPAGKKKDHEITATAKGNNNNNNTSKKGWERAATAVASSKAAALDDDTAMFINMSQELREEGNRLFHKKDHEGAMLKY EKALKLLPKSHIDVAHLHTAMAMCYMQLGLGEYPRAINECNLALQVSPRYSKALLKRARCYEALNRLDLAMRDVRVVLNS EPNNLTALEILDSLRVTMDEKGITLDETEIALAALQQQPEPPGARLRKVVKEKLQKKKKSSPRGQEDEKTKVVVENVKVH KDKDHNKDKNVKVEDKDDKEFVKKDKGVTRTVKLIYGEDIRWAQLPVNCSMKLVRDVIKDRFPRLKGVLVKYRDREGDLV TITTTAELRLAESCHVLGSIRLYVTQVDPDQEPCYDETTTSSNNGDVEMEKGGVKGSRSVAEKKTTVEDWLVQFARLFKN HVGFDSESYLDIHEVGMKLYSKAIEEAVTTDDAQELFEIAASKFQEMAALAMFNWGNVHLSRARRRVSFPEDGSREASFE HVKAAYEWAQKEYKEAELKYEEAMRIKPDFYEGLLALGYQQFEQAKLCWCYLIASKKDLEAGPFEEVLQLYNKAEDSMEK GMLMWEEIEEQRLNGLSKSDKYNATLEKMGLQGLFKDVSSDEAEEEASRMRLQIYLLWGTLLYERSVVEYKLGLPTWEEC LEVAVEKFELAGASSTDIGVMIKNHCSNETAMEGFKIDEIVQAWNEMYDGWQFDVPSFRLEPLFRRRVPKLHYILEQF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | - | – | |
| PANTHER | 1 | 718 | 718 | 0.0 | – | |
| PANTHER | 1 | 718 | 718 | 0.0 | – | |
| MobiDBLite | 1 | 15 | 15 | - | – | |
| Gene3D | 53 | 181 | 129 | 1.2E-28 | ||
| SUPERFAMILY | 54 | 174 | 121 | 8.44E-25 | ||
| ProSiteProfiles | 57 | 164 | 108 | 17.749 | ||
| ProSiteProfiles | 57 | 90 | 34 | 8.378 | ||
| SMART | 57 | 90 | 34 | 23.0 | ||
| SMART | 95 | 130 | 36 | 36.0 | ||
| ProSiteProfiles | 97 | 130 | 34 | 5.192 | ||
| SMART | 131 | 164 | 34 | 5.3 | ||
| ProSiteProfiles | 131 | 164 | 34 | 7.552 | ||
| MobiDBLite | 210 | 230 | 21 | - | – | |
| Gene3D | 263 | 346 | 84 | 1.4E-5 | – | |
| SMART | 269 | 347 | 79 | 1.6E-17 | ||
| SUPERFAMILY | 269 | 359 | 91 | 4.21E-15 | – | |
| ProSiteProfiles | 269 | 347 | 79 | 12.377 | ||
| Pfam | 269 | 346 | 78 | 6.8E-15 | ||
| CDD | 271 | 344 | 74 | 2.07492E-8 | – | |
| MobiDBLite | 353 | 367 | 15 | - | – | |
| MobiDBLite | 353 | 378 | 26 | - | – | |
| SUPERFAMILY | 430 | 525 | 96 | 9.49E-5 | ||
| ProSiteProfiles | 477 | 510 | 34 | 6.903 | ||
| ProSiteProfiles | 477 | 510 | 34 | 6.225 | ||
| SMART | 477 | 510 | 34 | 19.0 | ||
| Coils | 486 | 506 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0058100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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