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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0227200 |
| Transcript ID | LotjaGi5g1v0227200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD-repeat protein, putative; TAIR: AT5G27030.1 TOPLESS-related 3; Swiss-Prot: sp|Q84JM4|TPR3_ARATH Topless-related protein 3; TrEMBL-Plants: tr|Q2HW32|Q2HW32_MEDTR Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like; Found in the gene: LotjaGi5g1v0227200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53450469..53459976) extracted from Lotus japonicus Gifu genome v1.2.
TACACTCTCTTATCACTCAACAACTGATAATCTCAAAATGATAAGCAGTTCTGCCTATCAAATAAGCACCTGCGCGTATG ACATAAGCTTATCTGCTTATGTCTGATATATCCAAGTCAGTAGAAAAAGAACACGACCCTTGTACACACGCATCGAAGAG ACCGAGACCAAGTCTCTCTCTCCACTCTCTCTCCCTCCTCTTCTTTTTCCAAACCCTAGAAATTCTCCAATTTCATGTTG TAATCTTCACAAAGCCCCTGAATTCCTTGCTATTCAGCTCTGATTTGACTGTGGTAGGTGGAATTGGAGTGATCATGACT TCTTTGAGCAGAGAATTGGTGTTTCTCATACTCCAGTTTCTGGATGAGGAGAACTTCAAAGAGTCTGTGCACAAGTGAGC CCTCTTTCTTCCCTTCTTTCTCTTTTTCACTCCATGTTTCAAATGCCTGCAACTTTTTGGTGTGGGTGGGGTTTGTTGTT AGAAATGAGATAATCTGTTAGGAATTTCATGTCAGGATTCAATCTTTGTGCCAATTGGATAGGGGTAATGCAACATAGAT TGATTGTTCTTTGTTTGATGATGTTTCTTGGCTTTTGAAATGGGGGGAAGCAATTAGCTATGTAAATACACAAAATTAGT TAATGTTCTAGTGGTGATGACTAATAATCCTGCTCCTTTCATCCAAAAGGCAAAGGGTGTGTTTGATGCACATTGAGGTA CAATTAGTACAAGAAGAACAATATAGTATAAGTAGCAGAGTCACAAGTCACAACATTACTTTAGTTCTTTGTGCTGTCCG ATAATTGATGGTCACCGTATGTAGTTTTGAAGGAGAAAAGGGAAAGAAAGGATGGAGGGGGTGGGTTGAGGGAGACAAGG AGATTTAGAGGAGAGAGATATGAAGAAGAGAAAGAAAAAGTTGGTATTTTTTACTTTTAGATTATGTATTTTTTACTTTG GATGATGTTGTGTGTAGGAAACAAATTGTCCTTGGTTTAATGAATTACAAATTTAAAACTTTTTTTATGTGCTTCATCTA TTGTTTTATCCCGTGCCTTGATCATTTTTAAAACCAATGATTGGACAAGGATATATGTTATGTCATTACGTGGAAACTGG AATTAAGATGATAAAAAAATAAATTGATGCTTCTTTCTCTTCCTCCTGTTACAATTTCCTGTTTCTTGCAGTGGTCGACC GTAAGAACTTCCATTGTTATTTGGCATCAACTTGACTGTTAGTTTAACTTTTCAAATGCTTCTTAACGCATGCAGGCTTG AGCAAGAATCTGCGTTTTTTTTCAACATGAAGTACTTTGAGGAAAAAGTGCAGGCTGGCGAATGGGAAGAAGTTGAGAAG TACTTATCAGGGTTTACCAAAGTTGACGATAATAGATACTCAATGAAAATATTCTTTGAAATCAGGAAGCAGAAATATCT GGAAGCACTTGATCGGTAGATGGAACTTTATATCATTTTGGATATATTTTTTAATTTGTCTGTGCTTGCTGTGAACCTTC ACATTTTTGTCTCTGGTGTGTTTTTATTTAAGGCAAGACAAGCCAAAGGCTGTAGAGATATTAGTCGGCGATTTAAAAGT GTTCTCAACCTTCAATGAGGAGCTATACAAAGAAATCACCCAGCTATTAACTCTTACTAATTTCAGGTAATATCTTAAAT ATATTATCTTAACAGTAATCAGTGCCTTCTCTTGGCTGTTATGCAGATGAGATTGTACATCTGATTCATATCTCGAATCT CTGTGAATCTTGATTCACAACTCAGACAATTAAATGGTAAGCATGGTTATTGAGTGATATTTCATTTCATGTGACAGGGA GAATGAGCAGTTGTCTAAGTACAGTGACACCAAAACTGCTCGAAGCATTATGTTGATAGAGCTAAAAAAACTCATAGAGG CAAATCCTCTTTTCCGTGATAAGCTTGTCTTTCCTACCCTTAAGTCATCAAGACTGCGAACTTTAATTAATCAAAGGTAC ATGATTCAGCAAGTTTAAGCTTTCTTCTCCCTCCCTCCCTCTATTTAGCTACATTTTGTCATGCAATTCTTTGTAGATAG TTGGATGGTGTTTTAGGCTTTTAGCTCCCAATGTATTATTTTTTCAATTGGTAAATAATGGGGATTGGAAAGTTTTCCAC ACCTTTTTTTAAATCGAGTCTTCTAATCTGGATTTTAGCTTGTTATGCCTTGCCTTCTCTTTCTTGATCAATTAATCTAT CCATATGCCTTGTCAATGCAGTCTGAACTGGCAGCATCAGCTTTGTAAAAACCCAAATCCAAATCCAGATATAAAGACTT TATTCACAGATCACGCATGCGCACCTACTAATGGTCCTCTGGCGCCTAGCCCTGTCAATCTTCCAATTGCTGCAGTTGCG AAGCCTGCTGCTTATACTTCAGTTGGAGCTCATGGTGTATGATACCCTTGCATTTCAAACAACTGGCTACTTGCATTTTC AACTTATTCACAATAATTCTTACTGTATTCATTAATTAATGATTTGCTGATATTGTTTTATATAGCCCTTTCCACCTGCT GCTGCAACTTCTAATGCTAATGCTTTAGCTGGTTGGATGGCCAATGCCTCAGCTTCATCATCTGTTCAAGCAGCTGTTGT CACAGCACCAACTATACCAATCCCTCAGAATCAAGGTTAAAATAGTTGTTGCCCTATTATCCTTTTTTTAAATGTAAAAA TGGTTATCCTATTTTTTTCCATGATATTTACCCTAATTTCATGCATTCTTTTAATTTTGACTTCAATTCAAGGTTTGTTA TCATTTGTTCTTCAAGAGTTGCAAATGTATTTACTTGGCTAAGTGAGCAGGAGAATAATTTCTTGATCTCGAATTTAGAT ATTCAAATAATTTCAGAAGATGTCATGGCTTAATCACCCTCATGTTTCTTTAAACAGTGACTATCTTGAAACGCCCTAAA ACACCTCCGGCAACTCCTGGGATGGTTGATTATTGTCCGGGTCATTCTGTAGAGGAGGTGATTTTGATAAATTTCTGTTA AATTTAACTTTGCTTTGCATATTTTTGCGATGCGAAGAAATTTGTGTTATTTTGACTTTGAATGGTTGTTAACTCAAATC AGCATGGTTCATTTGTATAATTTCAGGTTTCCTATCCCTTGGCTCGACAAGCTTGTTCGTCACTAGACGATCTACCAAGA ACGGTGGCTATGACTTTGCATCAAGGATCGTCTGTGACAAGCATGGATTTTCATCCTTCTCGCCATACCTTACTTCTTGG TATTGATTATCATTATTGTATTGGGTTTAATATCTTGGTTGCTAAATATGAATAAAAAATAGCTTAGATTTTTTTCTTAT GGTATATATTTCCAATGGGCAGTTGGTTCCAATAATGGGGAAGTTACCCTCTGGGAACTCAGTTTGCGGGAAAGGTTGGT CTCAAAGCCATTCAAGATATGGGATGCATCGGCATGCTCATTACCAGTTCAGGTTTCATACTGTGCAATTTTTATTGTTC TACAGTACCATCAGTTGCGAGCCGGAACAAATAAATCTAGTCTAGCTTAAGCTATCATGGCCACTATTTATCATACTTGG CCATTACTCTTGGTGCTTGAAAGTTCAGAAATTTTGGAATTTATAGTTGAGTATTTTGCAGGCTGCTGTGGTTAAGGATG ATCCTGTTTCTGTTAGCCGTGTCACATGGAGTCCTGATGGAAGTTTTGTAGGTATGTGACTGTATGTTTCTGAAACCATG TTGAAGCTATCAGGTTAATATCTGTTGAATATCTGTTAAGATTTAGTTTATTATTAGTCTTATCTCATAGAGATATAGTT AAGTTTTGTTTCTCTATTTTAGATTAGGATCTATTTAAATAGAGATAATATCTATTTAAAAAGAGATAGGTTTAGATAGA TTTAGTTTCTTTTTATCTCTTTGTTAGTCTACATATATTGTAGTTTATAGTCAAGTATCATCAATGAAATATACAATAAA GAATTAAATATTTTATCAGATTCAAGTATATCTAACTGGTTGCTTTGCTCTAGGTGTTGCTTTTACTAAACATTTGATTC ATTTGTATGCTTACACTGGATCAAATGAGCTAGCCCAGCACAAAGAGGTGATGTACTTCTCATAAAAAATAGCTGAAGTT TTTTTGCTGCTTGATTAACATTTCCTTGTTGATGCAGATTGAAGCCCATGTTGGTGCTGTAAATGATTTAGCGTTTGCTC ATCCAAATAAACAGCCCTGTATTGTGACTTGTGGGGATGATAAGTTGATAAAGGTGCATGAAATCTACTTGTTTTCAACT TTGGATCTTGCCAAAATTATCTTTTTTTTCTGAAGAAGAAACTCTTACTAGGTTTGGGATTCAAATGGACGAACACTATT TACCTTTGAGGGGCACGAGGCACCTGTATATTCCATTTTTCCCCATCACAAAGGAAACATTCAGGTAATAAAATAGATAT CATTATTGTGACACCTACAATTTTTTATGTTAACTTTTGGGAAGGCTATTGTACTCGCTATAATTTGATAGATATATGCT CTATTTAATATATGTACATGTGTAGTTATTTTCACATTGAACTTATAAAAGCGGCTTTCATTTATTGTAATCTTAGAAAA TTACAGCCCCCATCCCATTTCCCATATATTGGCCCCTTTACAGGAGAAGATGTATTGTTTAACTTCTTGCAAGCTATATG TATGGATATAGTCAAACACACTAAAGGCTGCTAATGTTATTTTGCAGTTCATATTTTCAACTGCCATTGATGGGAAAATA AAGGCCTGGCTATACGATAACGTAGGTTCTAGGGTTGACTTTGATACCCCTGGTCACTGTTGTACTACAATGCTTTACAG CGCTGATGGAAGTAGGTAAGATGGATTTGGATATGGATGAGGGTAATCATTTCTTTGAATGCCATGTTCTATGGCTAATT GAGATTGTATTTTGTTGAAGTGTCTTACCATGCCTTCCAATTTATTTTCCCCACCTTTCTCCAGATTGTTTTCATGTGGG ACAAGTAAAGATGGAGAGTCTTTTCTTGTTGAATGGAATGAAAGTGAAGGTTCCATTAAGAGAACATACAATGGATTCAG AAAGAAATCCGCTGGTGTTGTGCAGTTTGACACAACGCAAAATCGCTTTTTGGCAGCAGGTGAAGATGGCCAAGTGAAAT TTTGGGACATGGACAATATTAATCTTCTAACAAGCACTGATGCAAATGGTGGATTACAGGTAGAGTATTATGGTTAACTG TTTAAGTCTTGTGGAGTATAACCACACTATATAAAACACCCCTTATCTGACTGTATGAATCTTCTCAGGTCCTTCCATAC TTGAGATTTAATAAGGAAGGAAATATTCTTGCTGTGACTATAGACAATGGATTCAAGATACTTGCTAATGCTACTGGTCT TAGATCCTTAAGAGTAATTGAAACTCCAGCATTTGAAGCATTGAGGTCCCCTGTGGAATCTGCTGCAATCAAGGTATATA GAAACTTTATCTTGGTTCCTATTGCTTAGATCAGAATATGTTAGGAAAGGAAATAATAAGGCTATTTGGAAAGTGAATAC TGGGAGAAAAGGGCCTAATAGTTAGAATGGGCGTGACAGTTAGATGTTACTAGGCTTGACCCAGTTAGATTAGTTATAAA TAATAATTGGTTGTTTATGGTTAGGATAGGTTTATGCTTTTCAGTCTATCAAATTGTATATTCTCTGGGAAATTTTTCTA GTTTGTAAAGGGATTTTCCCTTGAAAGAAGGACATTCCTTCTTGTGCATTAGTAAGAATTCTTTCTGTAAATCTTGATAT TTTCTTTTCTCTATTGGTGTGGGTTGTTTTCCATAACCTACTGTCGACGTTGTTTATGTCACATAGGTTGCTGGCTCTTC TGTTAATGTTATTCCTATTAACTGTAAAGTGGAAGAAGCTCCGCTGTCAGGCCTTCTCCAATTATTATATGAACCAGTTC CTGTGAACTTAATGATCATTATTATAATGTTAACACGATGACATTATGATTGTTTTTGTCCTTTTATTCTTATAGTATGC TTAATTCCATTATGCAATACCCCTTCCATTCCATGGAAACCCACCTTTTGGATACATCTGCTTTTCACCTTATGGGGAAC ATGTCCCCCTTCATATTGTGGGCTTACTATTAGATCCAAAAGATTTGCTTGAATCTGTTTTACTTTACCAAATAAAATGT GACTTAAATATTTTAAAATTTCTTATGAATTATTTACTGCATCTTAATACTTGTTTGCAACACATGGATTGGTTTTGGCC TTTTCAATCAAGAATGGAGCTGATCCCATTGGTCAAAGTGTAGAGAGACCAAGAATTGTGGAAGATGTAACAGGTAGAAC TGTACCATTGCAACTGTCTGAAATTCTGGACCCTGTTGAATGTCGGTCAGTTACCTTGCCTGAAAGCACAGATTCTTTCA ACAAGGTGTGTTGAATATTGGATATATGAGATTGCCATTATTCTATTGCAAACTGGGTGCTCTGTAGTTGCTTTAATTCT CTAATCCATATATAGGTTGTTCGACTTTTATATACGAATTCCGGTGCTGGTATTTTGGCCCTCGGTTCAAATGGTATACA GAAACTTTGGAAATGGCCTTTCAATAATCAGAATCCTTCTGGAAAGGTGGTTTTTAATCAAATAATTACTTTATGTACTT CCTCCTTCAGTCCTTTATTTTCTTTATACTATTCATTAGTTTTCCCTTTAAATAGATAGAGCACATGAGTCTGAAGTGTA TGTGATTACAGGCTACAGCCAGTGTTGTTCCACGACATTGGCAACCACCCAGTGGTCTTCTGATGACTAATCAAATCTTG GGTGTCAACCTTGAAGAAGCAGTCCCTTGCATTGCACTCTCAAAAAATGACTCATATGTGATGTCCGCCTGTGGTGGAAA GCTTTCACTATTTAACATAATGACATTCAAGGTGTGTCCAGATATACAACCCTGACATTCCATTTAATTTTAGGCTTTTT GGTTACTTATAGTTTACTTTTTATAGGTAATGGCGACATTTTTGCAACCATCTCCTGCCTCTACCTTTCTAGCTTTCCAT CCCCAGGATAACAACATTATAGCCATTGGGATGGATGATTCAACCATTCACATCTATAATGTCAGAGTGGCTGAGGTGAT TTCCATATTTAACCACTTATTTATTTCCTTTCAGATCTACACTTTCTAAATAATCTCACACATTTCCCTCCTTTTGGGGG GGGGGGTATACCAGGTGAAATCAAAATTGAAGGGTCACCAGAAGCGAATTACTGGTTTAGCCTTTTCAACCAATCTTCAC ATCCTGGTTTCATCTGGTGCTGATGCTCAAGTAAATCTTTTGACCGCTCTACTTTCTTATAAAATTCATTCAGAGTGGCA TGGGAAACTTTTATAGAGATGAGATAGCCCCTAATTATTTTTTTTGTAGATCTTTTGTTGGTTATCCTACTTTCCATTAT TTGCAGTTATCCTTGTTTTTGTTAGATTTGGTTTTCAATTTAAAGGGCAACAGAAAAGCCTTGCTTTTGTGGACTCTGGT CTATTATGAAATTAAATAGAGATCCACTTCATTGGCATTATGTTACTCGAAGGTGCCAATACTTGGGTGCTATTCAAAAT AATTTTCATTTTACTTCTATTTTGCTTTTACTCTATGCTTTTCCATTTTTGTTTTTTCAAAATTCCTTGTTTACTCTAAT GGTCTTGTGTCTGTTTATTTAGTTTAAATCATGTTTATGTTGGATTCTTTTTTTCCCCGCATCTCTATCCAAGGATTTTT ATGGTTAGGTTAAAGATTTTGTACATTAGTTGATGCAATCTGGTGCAAGTTTGTTGTTGGTTTTCTGCAATTAATAAATT TGTGAAGTGTCTCCTTTTTTTCCCTTCCTTTTTTTGTGTGAGAGTTGAAGTTGCCTGTCTTTTACTAATATTTGTGCCTC TACTACTGCTCTTATTAATTGCAGTGTTTTGCCCAGTAGGAAACATCACCTTTTGTTGTGGATATTTTTGCCTTTACTGA TTTTAAGAATTTATATGTTGTCTAGCTTTGTGTGTGGAGCATTGATACATGGAAGAAAAGAAAATCAATTCCATTACAAC TACCTGCGGGAAAGTCACCTGTTGGTGATACAGGGGTTCTGTTCCATTCAGATCAACTTCGCTTATTGGTAGTCCATGAG ACTCAGTTGGCTATATATGAGGCCTCTAAGATGGATCGCATTCGACAGGTATGAAGTTTCTCTCACTATTGATAGAGATT CTTATAGCTGACAAAATAGAAATTAAGATATGCTTTTGAATTTTTTTTGCTGCAGTGGGTTCCCCAAGATGTTCTGTCTG CCCCCATATCATGTGCAGCTTATTCCTGTGACAGTCAGTTAATATATGCTACATTTTGCGATGCAAACATTGGAGTTTTC GATGCTGATAGTTTGAGACTACGATGTCGTATCGCACCTTCAGTATGCTTGTCATCTGCCGCTTTGAGTGGGTAAGTGCC AGCCTAGTAATAGCACTTAGTTTAATCTTTATCATCTAAAATCTTGAACATTTTTTAAGGTTGTTTTCGTGATATAATTT GGTCCAAAATTTCCAAGTAATTTGATACAAGAAATCTGTTTGCAGAAGCCATGCTGTGTATCCTCTTGTGGTTGCAGCTA ATCCACTAGAACCTAACCAGTTTGCAGTTGGTTTAACTGATGGGTCTGTCAAAGTGATAGAACCCACTGAATCAGAAGGT AAGTGGGGATCTTTTCCACCTATGGACAACGGAAAATTGAATGGTAGGACAGCTTCTTCATCTACAACAAGCAACCACAC TGCTGACCAGGCTCAATGATAAGATTCATTGTATTATACTAGCCTAGTTCCTGCCATTTGTAAATTTATCATCCTAGTTG TCTAGAGTTTGATTCACCAGTTTGTCTCTAGTCAATATTAGGTCAGCTTGGACATAAAATGGTAAATGTTTAAATGGTAG AAAGTGTTTGTATTACAGTTTTCAAAAAAGTGAAGTCGTTTTCATTTAAGTAACATACAAGCCCCATTCACATTTCTCCT CATAGAATGTGTTTTGTCTGTTGATATTTTCTCGGAGCGTGTGATAAAACCAATGGAATGGCTTCCTAAACATAGATGTA GTATGCAGTGATTTGGTGAAGAGGTCTGCTAATTAGTGATGTCTTAGAGCATCTCCAATGTAAAGTTCTTAGTTCTTATT TTTGAGTTAAGAACTAAGAATTGAGTTTTTAACCACAGGGGGCTGACGTGGAGTTCTAAGTTCTTAAAAATAAGAACTAG TTCTTATATAAAATGTTTTACATTTTGAGTTCATAGCATAAAAAAATAAATTTTTCTCTCTCATTCATTTAATTTAAGTA TTGAATTAGCATTTAAATTTAAATCAAAGTTATATGGAAATAAAAAATATTAATATAATAGTATTGTG
CDS sequence (LotjaGi5g1v0227200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGATATATCCAAGTCAGTAGAAAAAGAACACGACCCTTGTACACACGCATCGAAGAGACCGAGACCAAGTCTCTC TCTCCACTCTCTCTCCCTCCTCTTCTTTTTCCAAACCCTAGAAATTCTCCAATTTCATGTTGTAATCTTCACAAAGCCCC TGAATTCCTTGCTATTCAGCTCTGATTTGACTGTGGTAGGTGGAATTGGAGTGATCATGACTTCTTTGAGCAGAGAATTG GTGTTTCTCATACTCCAGTTTCTGGATGAGGAGAACTTCAAAGAGTCTGTGCACAAGCTTGAGCAAGAATCTGCGTTTTT TTTCAACATGAAGTACTTTGAGGAAAAAGTGCAGGCTGGCGAATGGGAAGAAGTTGAGAAGTACTTATCAGGGTTTACCA AAGTTGACGATAATAGATACTCAATGAAAATATTCTTTGAAATCAGGAAGCAGAAATATCTGGAAGCACTTGATCGGCAA GACAAGCCAAAGGCTGTAGAGATATTAGTCGGCGATTTAAAAGTGTTCTCAACCTTCAATGAGGAGCTATACAAAGAAAT CACCCAGCTATTAACTCTTACTAATTTCAGGGAGAATGAGCAGTTGTCTAAGTACAGTGACACCAAAACTGCTCGAAGCA TTATGTTGATAGAGCTAAAAAAACTCATAGAGGCAAATCCTCTTTTCCGTGATAAGCTTGTCTTTCCTACCCTTAAGTCA TCAAGACTGCGAACTTTAATTAATCAAAGTCTGAACTGGCAGCATCAGCTTTGTAAAAACCCAAATCCAAATCCAGATAT AAAGACTTTATTCACAGATCACGCATGCGCACCTACTAATGGTCCTCTGGCGCCTAGCCCTGTCAATCTTCCAATTGCTG CAGTTGCGAAGCCTGCTGCTTATACTTCAGTTGGAGCTCATGGTCCCTTTCCACCTGCTGCTGCAACTTCTAATGCTAAT GCTTTAGCTGGTTGGATGGCCAATGCCTCAGCTTCATCATCTGTTCAAGCAGCTGTTGTCACAGCACCAACTATACCAAT CCCTCAGAATCAAGTGACTATCTTGAAACGCCCTAAAACACCTCCGGCAACTCCTGGGATGGTTGATTATTGTCCGGGTC ATTCTGTAGAGGAGGTTTCCTATCCCTTGGCTCGACAAGCTTGTTCGTCACTAGACGATCTACCAAGAACGGTGGCTATG ACTTTGCATCAAGGATCGTCTGTGACAAGCATGGATTTTCATCCTTCTCGCCATACCTTACTTCTTGTTGGTTCCAATAA TGGGGAAGTTACCCTCTGGGAACTCAGTTTGCGGGAAAGGTTGGTCTCAAAGCCATTCAAGATATGGGATGCATCGGCAT GCTCATTACCAGTTCAGGCTGCTGTGGTTAAGGATGATCCTGTTTCTGTTAGCCGTGTCACATGGAGTCCTGATGGAAGT TTTGTAGGTGTTGCTTTTACTAAACATTTGATTCATTTGTATGCTTACACTGGATCAAATGAGCTAGCCCAGCACAAAGA GATTGAAGCCCATGTTGGTGCTGTAAATGATTTAGCGTTTGCTCATCCAAATAAACAGCCCTGTATTGTGACTTGTGGGG ATGATAAGTTGATAAAGGTTTGGGATTCAAATGGACGAACACTATTTACCTTTGAGGGGCACGAGGCACCTGTATATTCC ATTTTTCCCCATCACAAAGGAAACATTCAGTTCATATTTTCAACTGCCATTGATGGGAAAATAAAGGCCTGGCTATACGA TAACGTAGGTTCTAGGGTTGACTTTGATACCCCTGGTCACTGTTGTACTACAATGCTTTACAGCGCTGATGGAAGTAGAT TGTTTTCATGTGGGACAAGTAAAGATGGAGAGTCTTTTCTTGTTGAATGGAATGAAAGTGAAGGTTCCATTAAGAGAACA TACAATGGATTCAGAAAGAAATCCGCTGGTGTTGTGCAGTTTGACACAACGCAAAATCGCTTTTTGGCAGCAGGTGAAGA TGGCCAAGTGAAATTTTGGGACATGGACAATATTAATCTTCTAACAAGCACTGATGCAAATGGTGGATTACAGGTCCTTC CATACTTGAGATTTAATAAGGAAGGAAATATTCTTGCTGTGACTATAGACAATGGATTCAAGATACTTGCTAATGCTACT GGTCTTAGATCCTTAAGAGTAATTGAAACTCCAGCATTTGAAGCATTGAGGTCCCCTGTGGAATCTGCTGCAATCAAGAA TGGAGCTGATCCCATTGGTCAAAGTGTAGAGAGACCAAGAATTGTGGAAGATGTAACAGGTAGAACTGTACCATTGCAAC TGTCTGAAATTCTGGACCCTGTTGAATGTCGGTCAGTTACCTTGCCTGAAAGCACAGATTCTTTCAACAAGGTTGTTCGA CTTTTATATACGAATTCCGGTGCTGGTATTTTGGCCCTCGGTTCAAATGGTATACAGAAACTTTGGAAATGGCCTTTCAA TAATCAGAATCCTTCTGGAAAGGCTACAGCCAGTGTTGTTCCACGACATTGGCAACCACCCAGTGGTCTTCTGATGACTA ATCAAATCTTGGGTGTCAACCTTGAAGAAGCAGTCCCTTGCATTGCACTCTCAAAAAATGACTCATATGTGATGTCCGCC TGTGGTGGAAAGCTTTCACTATTTAACATAATGACATTCAAGGTAATGGCGACATTTTTGCAACCATCTCCTGCCTCTAC CTTTCTAGCTTTCCATCCCCAGGATAACAACATTATAGCCATTGGGATGGATGATTCAACCATTCACATCTATAATGTCA GAGTGGCTGAGGTGAAATCAAAATTGAAGGGTCACCAGAAGCGAATTACTGGTTTAGCCTTTTCAACCAATCTTCACATC CTGGTTTCATCTGGTGCTGATGCTCAACTTTGTGTGTGGAGCATTGATACATGGAAGAAAAGAAAATCAATTCCATTACA ACTACCTGCGGGAAAGTCACCTGTTGGTGATACAGGGGTTCTGTTCCATTCAGATCAACTTCGCTTATTGGTAGTCCATG AGACTCAGTTGGCTATATATGAGGCCTCTAAGATGGATCGCATTCGACAGTGGGTTCCCCAAGATGTTCTGTCTGCCCCC ATATCATGTGCAGCTTATTCCTGTGACAGTCAGTTAATATATGCTACATTTTGCGATGCAAACATTGGAGTTTTCGATGC TGATAGTTTGAGACTACGATGTCGTATCGCACCTTCAGTATGCTTGTCATCTGCCGCTTTGAGTGGAAGCCATGCTGTGT ATCCTCTTGTGGTTGCAGCTAATCCACTAGAACCTAACCAGTTTGCAGTTGGTTTAACTGATGGGTCTGTCAAAGTGATA GAACCCACTGAATCAGAAGGTAAGTGGGGATCTTTTCCACCTATGGACAACGGAAAATTGAATGGTAGGACAGCTTCTTC ATCTACAACAAGCAACCACACTGCTGACCAGGCTCAATGA
Protein sequence (LotjaGi5g1v0227200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSDISKSVEKEHDPCTHASKRPRPSLSLHSLSLLFFFQTLEILQFHVVIFTKPLNSLLFSSDLTVVGGIGVIMTSLSREL VFLILQFLDEENFKESVHKLEQESAFFFNMKYFEEKVQAGEWEEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDRQ DKPKAVEILVGDLKVFSTFNEELYKEITQLLTLTNFRENEQLSKYSDTKTARSIMLIELKKLIEANPLFRDKLVFPTLKS SRLRTLINQSLNWQHQLCKNPNPNPDIKTLFTDHACAPTNGPLAPSPVNLPIAAVAKPAAYTSVGAHGPFPPAAATSNAN ALAGWMANASASSSVQAAVVTAPTIPIPQNQVTILKRPKTPPATPGMVDYCPGHSVEEVSYPLARQACSSLDDLPRTVAM TLHQGSSVTSMDFHPSRHTLLLVGSNNGEVTLWELSLRERLVSKPFKIWDASACSLPVQAAVVKDDPVSVSRVTWSPDGS FVGVAFTKHLIHLYAYTGSNELAQHKEIEAHVGAVNDLAFAHPNKQPCIVTCGDDKLIKVWDSNGRTLFTFEGHEAPVYS IFPHHKGNIQFIFSTAIDGKIKAWLYDNVGSRVDFDTPGHCCTTMLYSADGSRLFSCGTSKDGESFLVEWNESEGSIKRT YNGFRKKSAGVVQFDTTQNRFLAAGEDGQVKFWDMDNINLLTSTDANGGLQVLPYLRFNKEGNILAVTIDNGFKILANAT GLRSLRVIETPAFEALRSPVESAAIKNGADPIGQSVERPRIVEDVTGRTVPLQLSEILDPVECRSVTLPESTDSFNKVVR LLYTNSGAGILALGSNGIQKLWKWPFNNQNPSGKATASVVPRHWQPPSGLLMTNQILGVNLEEAVPCIALSKNDSYVMSA CGGKLSLFNIMTFKVMATFLQPSPASTFLAFHPQDNNIIAIGMDDSTIHIYNVRVAEVKSKLKGHQKRITGLAFSTNLHI LVSSGADAQLCVWSIDTWKKRKSIPLQLPAGKSPVGDTGVLFHSDQLRLLVVHETQLAIYEASKMDRIRQWVPQDVLSAP ISCAAYSCDSQLIYATFCDANIGVFDADSLRLRCRIAPSVCLSSAALSGSHAVYPLVVAANPLEPNQFAVGLTDGSVKVI EPTESEGKWGSFPPMDNGKLNGRTASSSTTSNHTADQAQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 30 | 30 | - | – | |
| MobiDBLite | 1 | 23 | 23 | - | – | |
| Phobius | 31 | 51 | 21 | - | – | |
| Phobius | 52 | 62 | 11 | - | – | |
| Phobius | 63 | 88 | 26 | - | – | |
| PANTHER | 73 | 1159 | 1087 | 0.0 | – | |
| PANTHER | 73 | 1159 | 1087 | 0.0 | ||
| SMART | 76 | 108 | 33 | 6.9E-4 | ||
| ProSiteProfiles | 76 | 108 | 33 | 9.702 | ||
| Phobius | 89 | 1159 | 1071 | - | – | |
| SMART | 106 | 164 | 59 | 6.2E-14 | ||
| ProSiteProfiles | 106 | 164 | 59 | 13.474 | ||
| Gene3D | 383 | 597 | 215 | 1.3E-27 | ||
| SMART | 395 | 434 | 40 | 0.0036 | ||
| ProSiteProfiles | 401 | 683 | 283 | 13.791 | ||
| ProSiteProfiles | 401 | 443 | 43 | 9.406 | ||
| SUPERFAMILY | 403 | 716 | 314 | 9.16E-40 | ||
| SMART | 456 | 495 | 40 | 31.0 | ||
| SMART | 501 | 542 | 42 | 2.0E-5 | ||
| Pfam | 508 | 542 | 35 | 0.011 | ||
| ProSiteProfiles | 508 | 542 | 35 | 9.573 | ||
| ProSitePatterns | 529 | 543 | 15 | - | ||
| SMART | 544 | 585 | 42 | 0.062 | ||
| Gene3D | 598 | 731 | 134 | 6.2E-9 | ||
| SMART | 634 | 674 | 41 | 0.094 | ||
| ProSiteProfiles | 652 | 683 | 32 | 9.673 | ||
| SMART | 853 | 889 | 37 | 150.0 | ||
| Gene3D | 859 | 1131 | 273 | 1.9E-30 | ||
| SUPERFAMILY | 860 | 1122 | 263 | 4.71E-37 | ||
| SMART | 892 | 932 | 41 | 1.4 | ||
| ProSiteProfiles | 899 | 983 | 85 | 15.188 | ||
| SMART | 935 | 974 | 40 | 1.5E-5 | ||
| Pfam | 940 | 974 | 35 | 0.0023 | ||
| ProSiteProfiles | 942 | 983 | 42 | 13.082 | ||
| SMART | 1030 | 1066 | 37 | 14.0 | ||
| SMART | 1078 | 1121 | 44 | 42.0 | ||
| MobiDBLite | 1124 | 1159 | 36 | - | – | |
| MobiDBLite | 1140 | 1159 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi5g1v0227200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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