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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0229900 |
| Transcript ID | LotjaGi5g1v0229900.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lon protease homolog; TAIR: AT5G26860.1 lon protease 1; Swiss-Prot: sp|P93648|LONM_MAIZE Lon protease homolog, mitochondrial; TrEMBL-Plants: tr|A0A1J7FSE1|A0A1J7FSE1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0229900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53725230..53730471) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAATCACCAAGATTCAAGTAATAATGTCTCGGCTATCTTTAGTGTACTGCAGTGATTTTTTCATCTTATATTGAAG CTTGTGTTGATTCTTGTCAGGAATCAATAGCAAAAGCAATTGAAGAAAAGATAAGCAATGAGCAGCGTCGTTTTTTGTTG AATGAGCAGCTTAAGGCCATAAAGAAGGTACAAGCGATGCTTTGATTTGATAAGTGTACTTCAAAACCGAAACAAGCTTG TATTTCTCTCATATCAACAATACTTTTCTTCAGAAAATTGGTTCATTATTTCTTTTGATGTAGTTTCTATCATTAATTTA TCCATGGGCCATGAGATACTGCTTGATGTAACTAAATGCTGAGAAAAATGCTGGTTGAGCATATCTGTTACATTATTGGT ATCATTCTTTGGAAGTCTCAGATTTTAGAATACTATGATGTCCAATCAGAGGACACTGTCCTAATGTCTATCTTTTTCGT AGGTTTTATATTTTATCCTGTGGTCTATAAAGTTTAGGTGTCAATATAGGCCTTTGGTCTTGCTGGTGGCATTTATCCTA ACTTGAATGCAGTTATAACTTATAAGTAATTACGAATGATATGCTTTGCTGAAGGCTCAACTATTTGGGGGTGATCTGAA ACTTATTTTCTTTTCATTGGGATTTTTTCCCCTTTTTGCAGGAATTAGGACTGGAGACTGATGACAAAACAGCTCTTACT GGTTTGTTCTTCTTGTCTATAATATCTGTTTTTATTTCAAGATAGTGGATTTCTTTTATTTACTTATTTCCTTGCTTAGT GGACTGATGTTGTGTGCATACAAGTTGGCTATGACACTGTAGCTTTGTAGGGCTTATCTGTTTGATTGAAGTCTTTCTGT CTTCCAAATTACTAAAAAATGTTCAGCTGACTGGTTTTTTTAACCCTCTTTATGTTTCTCTACCAATATCTTTCAAATAA TTATATCCTATAGTGATATAAGAATGTTCTTCATATTATACTTTTTATTTTATTTTGTTTTAAGCTTGTTATTGTAGCTT CTAGTTGTTAGTCCACAAACTAAAATGTTTGCTAGGGTGTACTTTCTCCTGAAACTCATTGCTATTATAACATGAATTTT TCTTTTTGTTTCAGCTAAATTCAAGGAAAGGATTGAACCAAAGCGAGAAAAATGCCCGCCTTATGTTTTACAAGTTATAG ATGAAGAGCTCACAAAGCTACAGCTATTGGAGGCTAGTTCTAGTGAATTCAGTGTTACCCGTAACTACTTGGACTGGTTG ACTGCACTGCCTTGGGGTGAATACAGGTTTGCGACTTTGCGTACATAGAATTTCGTTCTTACCACCATTGCTGGAGTAAT TTAAATCTATTTAGACTTCAATGCATAACCATTGAGGTGGCTAGGTGTATTTGATACTTTAAAATTAGGACAGCTTAATT TTCAGAGATTTTTGGATGAATTTAGCTTAACACTACCTAAATAATGGAAGAAGTATGAAGATTTTAAAAAATCAGGTGAG CTTTTTTTTTTTTCTAACTTGTCCTTAGATTTGATACGACGAGAACTAAACTCCATTTAACTAATATTAAACTAGAATTT CACTTTCATCTTGCTCTATCACTTAAAAATTCAACACTAATTGTCACTTTTAACGTTTCGTTAACTTAATTTCATATTTA TGATCTAGGATAGTTAAAAGATTTATATATCTTGTTACATATCCATATTCCATACGAACACAACTTACAACAGAGAACTA GAACTAGTTGGGAATTCTATAAGGACCCTGAACTCCCTTGCGCTTGACATACCTTAGCTTAATTAAATAATGCATCAAAA TAAATACATACACGGTATAAAGACTCTTACAAAAGAATAGCAGAAAACTGAATATTTTCTGCCTCAAGGTTTGCTGTATG CTTTCGTGCCCATGGGACCAAGGAGCTTGCATTATGGCTGCAATTTGCAATCACTACTTTCAATGTGATTTTTGTCCTAG GGAGCATAACAGTAATAAAAAAGTTTATGAAAACTAGTTACACTCGGATAAGTCCCAGAGATGACTTAAATCCTTACATA CATTCACAACTTAATCAAACATATCAGTTCTTGCCAACGGAAACACATGCCTCTTACCTTCTATTTGGATGGAAATCCTC AGACACACTGCTCGCTTATGTAATTCCAGCCAAGCAGTGGTGCTTTCCTGTCAGGCCGTGCTACCCCTGAACCCATCTCC TCTGTTGTTCACGTTCTTTGTTCTGCACTCATCTGCTAATCTGTTTTTCTTTCTTTCTCAGTTTGCCTTTTATCTGTATT ATGTAACTATTGTTTTGTTACCCACTCAATTTGGTTGTACCAGTTTTGTCTTCACATCTCTGTCTGTTTTTGCGTTCTGA CTTCTTATTGATCTAAAACTTCTGTGTTCAACTTAAAACCCACAACTATTGATTATTAATTATGATTATAAACATATCTT CAATTTGAATATTTTATACTTTTTGAAAATTTATGTGTAATATAGGTTATTTAACATATGTCTAAATTTTAATGTAGTGG TTATCCTTCAATCGACTATCCAACTAGAGCAGTTTTGGGATTGGCCACTATGTGCTGCTAACTGGGATTGATAACTACGA ACCAGATTTCATTAGATACCTATGTTCTACCTTTATCTCTTACAATACTCATAGTATATGCATGAGTAAAGTAAGAGGGT AGAGTAACATTCCATTTTTCATGCAATTTCGCATTTAGCATATGTGAATATTGGGAAACTAGAATAATGTATCCCAACCA GTTTTAGCATTGCAAAACAACCTAATCCTGGCCAACTCAAAGCACCACAACCGTGTACTTGAGGGAGCACAGCTGTGCTA CTGGAATAGTGATGAACATGATTGTGCTTTAGCATAGAGCATGGTTAATTCCCAGGTGCGAATATGTAGTTATTTTCTCT GTATAACCAGCGAAAAACACCAATACCATCATTACTTTATTATACAATTCAAATCATGAAAACAGATTCAAAGGATTGAA TTTCACAAACCCTATCCCACTATAATCGTATTCATACTGAACCATGACCCAAACATAAATCTTTGAACGCCAACCAAAAC TCAAACTTACTCTTATCATAAAGACGCCCCAAGTCTTGGAATTTGAGGTTGAATAAGTTATAATGACCTTGAAAAATCAA GGGTTTGTTGGGTACGAAGCTTGCCAAGCTTCCTCAGTTGAAGTTGTTGATTCTCTATATCTCCACCTCTGACCTTCAAA CTCTTCTCCCTCTCCCTTTTTGAGTTTTTTGACTGGTTTCTGCTACACTTAACCCACTCCGGCACCAAGTCCCCTCCTTC CCTTGCAACTTAATCTCATCATCCAATTTGGAACCACATCCCTCTAAATTTTGAAACAAAAGGTCTTTAGTTAAATTTAA CTGTATGTTAAGGGTCTAGTTAGTCAATTTGATTAAGAGTTGCATCCATATAGTACACTTATAAACTTAAAACTTACATC AGTTAGGAAAGTTGCCAGTTAAGAATTTCGGGGATGTTACATTAAGGGTTTTAATTTTGTGAGTTATAGTCTTTTATATT TTAACAACAAACTATTTTGAATCTCAAGAATTTCAATCTGTTAATTTTCCAATCCAGTGACGAGAACTTTGATGTTATTG GGGCTCAAAAGATTCTTGATGAAGACCATTATGGATTAACTGATGTGAAGGAAAGGATATTGGAATTCATAGCTGTTGGG AAATTGAGAGGATCTTCACAGGGTAAGCGCATGTTCATCTATGTAATGTATCCTAAAGATTTATATTGGAGGTTTAGTGT GTGCCAAATACTACATTGCTAAATATTGATTTGAATTTTAATGTCTACCAAATACTATTTCTATCCTTTCTTGAAGCAGG TGAGATGCTTTCATGAAGTACTTTCTAAGTTACCATTTATCTTGATGCTTGATTCTAATTTTATGTATTCCTACATAGAA CATTCTATGGTAGGATGAACCTTCTGTGGAGTATGGTATAAGTTTTTTCTACTGGTATAAATATGTGAAATTTGAATATT AACTTAAAATATTACAGTCTTGCTTGACATGGTCAGACTTTGAAATATTTTTTTTTTTTTTAGTTTAACGAAGGCAAACT TACTCAGTTTTATGTATTTTGTGCTGATTATTGTTAAAAAGGTTCTAAGATCTTGGCTGTAGTGTGCTAACCCATTTATT TAATGTTTAATCCTTTGGTGCTTATTGTGTTTGCATGTTCAATAAGTGACATGGTCCTTTATCTTTCTCAACCTTGCAGG GAAGATTATATGTCTTTCTGGTCCACCAGGAGTGGGCAAAACAAGTATTGGCCGTTCAATTGCACGTGCCTTGAACCGTA ACTTCTTCCGATTCTCTGTAGGAGGATTAGCTGATGTGGCTGAAATCAAGGTAGCTAAAGTATTTTTGTTTCCTTCACAA GGTTGAATTATTTACCTGGTTTATAACAACATAATGTTTTGTATTCTTAATATTTTCTCTAACAGGGGCATCGTCGAACC TATATTGGTGCTATGCCAGGGAAGATGGTGCAATGCCTTAAGAATGTTGGAACAGCCAATCCTCTTGTTTTGATTGATGA GATTGACAAAGTAATACATTGCTGGACGTTCACTTTTTTTGTGGATGAGTAGCCTTGTTTTCTGATTTCCCATTCTATTT TCTATTGCTATAGGTTCCCCTGACCCTAATAAAATAATCTTTGAATTTCGACTGTATTAAAATTTCTATAGTTTCTAATC TTGTAAATCTTTTCTAAATATGATGATTTTACACTCTCTTACTATTGTTTTTTTATGGGTAGTTGGGCAGAGGGCATGCT GGTGATCCAGCAAGTGCTTTGTTAGAGCTTCTGGATCCAGAGCAGAATGCGAATTTTCTGGACCACTATCTTGACGTTCC TATTGATCTATCAAAGGTATAATCTGGTGCATTAATGATGAGGTTATAGAAATGGAAGAGTCATCATTTTTCATGGTTTA TTTATTATATGTTCATTGCCGATCTAAAATGACTTGTTGTATCTGTCTATAGCGAGGTCCTTGGGTAATAAAATAGTTCT TGAATGTATAGCTTTCATTCAGTGCCTTGGAGGCAGGCATATTCTAAATGTTTTTAGCATGGTGACTCATACATTGGAAA TTTCACTGCAGGTTCTTTTTGTTTGCACTGCAAATGTTGTGG
CDS sequence (LotjaGi5g1v0229900.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAATCACCAAGATTCAAGAATCAATAGCAAAAGCAATTGAAGAAAAGATAAGCAATGAGCAGCGTCGTTTTTTGTT GAATGAGCAGCTTAAGGCCATAAAGAAGGAATTAGGACTGGAGACTGATGACAAAACAGCTCTTACTGCTAAATTCAAGG AAAGGATTGAACCAAAGCGAGAAAAATGCCCGCCTTATGTTTTACAAGTTATAGATGAAGAGCTCACAAAGCTACAGCTA TTGGAGGCTAGTTCTAGTGAATTCAGTGTTACCCGTAACTACTTGGACTGGTTGACTGCACTGCCTTGGGGTGAATACAG TGACGAGAACTTTGATGTTATTGGGGCTCAAAAGATTCTTGATGAAGACCATTATGGATTAACTGATGTGAAGGAAAGGA TATTGGAATTCATAGCTGTTGGGAAATTGAGAGGATCTTCACAGGGGAAGATTATATGTCTTTCTGGTCCACCAGGAGTG GGCAAAACAAGTATTGGCCGTTCAATTGCACGTGCCTTGAACCGTAACTTCTTCCGATTCTCTGTAGGAGGATTAGCTGA TGTGGCTGAAATCAAGGGGCATCGTCGAACCTATATTGGTGCTATGCCAGGGAAGATGGTGCAATGCCTTAAGAATGTTG GAACAGCCAATCCTCTTGTTTTGATTGATGAGATTGACAAATTGGGCAGAGGGCATGCTGGTGATCCAGCAAGTGCTTTG TTAGAGCTTCTGGATCCAGAGCAGAATGCGAATTTTCTGGACCACTATCTTGACGTTCCTATTGATCTATCAAAGGTATA A
Protein sequence (LotjaGi5g1v0229900.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEITKIQESIAKAIEEKISNEQRRFLLNEQLKAIKKELGLETDDKTALTAKFKERIEPKREKCPPYVLQVIDEELTKLQL LEASSSEFSVTRNYLDWLTALPWGEYSDENFDVIGAQKILDEDHYGLTDVKERILEFIAVGKLRGSSQGKIICLSGPPGV GKTSIGRSIARALNRNFFRFSVGGLADVAEIKGHRRTYIGAMPGKMVQCLKNVGTANPLVLIDEIDKLGRGHAGDPASAL LELLDPEQNANFLDHYLDVPIDLSKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 42 | 42 | 8.2E-10 | – | |
| PANTHER | 1 | 266 | 266 | 1.8E-178 | – | |
| PANTHER | 1 | 266 | 266 | 1.8E-178 | ||
| SUPERFAMILY | 107 | 254 | 148 | 9.33E-31 | ||
| Gene3D | 115 | 266 | 152 | 8.1E-54 | – | |
| CDD | 131 | 231 | 101 | 2.6115E-11 | – | |
| SMART | 148 | 263 | 116 | 4.4E-6 | ||
| Pfam | 152 | 250 | 99 | 7.0E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP-dependent peptidase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the hydrolysis of peptide bonds. | ||
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds. |
Expression pattern of LotjaGi5g1v0229900.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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