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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0246000 |
| Transcript ID | LotjaGi5g1v0246000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|I1JBG9|I1JBG9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0246000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55417280..55421361) extracted from Lotus japonicus Gifu genome v1.2.
ATTTGATTAATTAGCTTATTGATTTTTTTCTGTTAGTCACCAAAAATCTCACCAGCCAAGTTGCTTCATTTTCTAAATAC TAGCTAACTGAAAAAAGAACATAATGGAAAATCCAATCACCAAATTGAGGGCCAACTTATAGCATTTGGATATGTCATCT CACCTATATATATTGTTCCCTCCATCCCATAACGTTTCAAACCACCAAAGCCTACATTCATCTACATTCATAGTACTCCT TTTTCTTCTCTTTCCCAAATGGATTCCATGTCCTTACCCCTCATCGCCATTCTCTTTCTCCTCCTCATTTCCGGCAGCCA GGCACGTGAGCCTTTCGCCTGTGATCCGAAGAACACAACCACGACGAACTTGCCATTTTGCCGGGCATCGCTGGTAACAG GAGCCAGGGTTAATGACATAATTGGAAGGTTGACACTACAAGAGAAGGTTAACTTGCTGGTGAACAATGCCGCGGCGGTT CCTAGGCTTGGAATCAAAGGCTATGAGTGGTGGTCGGAGGCACTACACGGTGTTTCAAATGTGGGTCCAGGAACCAAGTT TGGTGGCCAATTCCCTGCTGCAACTAGCTTCCCTCAAGTCATCACCACTGCTGCTTCATTCAATGCTTCATTGTGGGAAG CAATCGGACAGGTGAGCTTTAATCTCTGTTATTCTGTACCTTATTTGGTCACGTTATATGTTGTAGTTGGTATAGTTTTG GAGCTTTGCTTCTGTTTTCTACTTTTCTAAGTTAGATGGAATAGTTAGTACTTAATTAATACTAACAAAAGTAGTCTAGC AGATCATTTTTTTTCTTACAGTCTAGCAGATCATTGTCATCAAACTTTAAAAATATTAATTTAACTAATAACACAAATAT TAATTTAACGAATAACAATAATATATCTACAAACTTTAAAAATACACCAATCTATAGCCAAATGTTTGATTTTAGGATGG ATACTTTGATATATATACTCAAACCAGGGGTGAGAAAAACTAACAAACGAGGCTAATGGTAGGTTGTTTCGGATGAAGCA AGAGCAATGTACAATGGAGGTATGGGTGGGCTCACATATTGGAGCCCAAACGTCAACATATTCAGGGATCCACGATGGGG TCGTGGACAGGAGACTCCCGGTGAGGACCCAATTCTAGCCGGGAAGTATGCAGCTAGTTATGTAAGAGGACTACAGGGAA CAAACCGTAGTCGGTTGAAGGTGGCTGCTTCTTGCAAGCACTTCACAGCTTATGATCTTGATAATTGGAACGGTGTGGAT CGCTTTCACTTCAATGCAAAGGTATGTGCAAATTTTGGATAAGAGATTATTCTTGGAAAGTTATAGTGTGTGCCATTTTT TGAGTGGTTCACCGGTAACCCAATGTTAGTAGCCGTTGAATCATAATCGTTAATTAAAAATTGTCATATCAACGACTATT AATGTTGGATCACCAGTGGACCATCCACATTATAATTTCTCATTAAATTTATAATATTATGAGTAGAAGCTTATTTTGAG CTTGATTCATAGGTGAGCAAGCAGGACATAGAAGACACGTTCAATGTGCCATTCAGGATGTGTGTGAAGGAAGGTAATGT GGCGAGTGTGATGTGTTCTTATAATCAAGTTAATGGTGTCCCTACCTGTGCAGACGCCAACCTCCTCAAGAGAACTGTTC GTGGCCAATGGGGTCTTAATGGGTAAGATTACAGACACAGCCAAAAGGAATTACATATCTCAAGCAAATAAAACTTACCC TTTTGCTTTGCTATGAAATATAATTCAGGTACATTGTATCAGACTGTGACTCTGTTGGGGTGTTCTACACTAGCCAACAT TACACATCAACACCAGAAGAAGCTGCTGCTGATGCCATTAAAGCAGGCTAGTTAATTCTTAATCTAATTAATTGGCTGAT TTCTTCTACATTTATGCATATTTCATTAGTAATAGGAAAATTATGGAGCCACAAAATGGCTTAACTTGATATTTGATCAT GTTATTACAGGCTTGGATTTGGATTGTGGGCCTTTCTTAGGGGCCCATACACAGAATGCTGTCAAGAGAGGCCTGTTAAG TGAAGCTGATGTGAATGTTGCATTAGCAAACACATTGACAGTTCAAATGAGGCTAGGGATGTTTGATGGCGAGCCATCAA GTCAAGCATATGGCAACCTTGGTCCAAGAGATGTGTGCACCCAACCTCACCAAGAGCTAGCCCTTGAAGCTGCTAGACAA GGGATTGTGCTCCTAAAGAACAGTGGTCCCTCTTTGCCTCTCTCCACTCGACGCCATCGCACCCTGGCTATCATTGGGCC CAATTCTAATGCCACTGTCACAATGATAGGAAACTATGCTGGTATGTCCTTTGTACAACAAAAATCTTGTTAATGCCTAC AAAATGTGACCAAGACAAACTTAATTAAGGTCTAAAAAAGTGAGGCCAAGGGTTTCCTTATGACTTTTTCTTTCCTTGCT TATTAGGTATTGGTTGTAGATACACAAGCCCTTTAGAAGGAATAGGAAAGTACGCAAAGACTATCCACGAGCTCGGGTGT GCAAATGTGGCTTGCACTGATGACAAGCAATTCGGGTCAGCTCTGAATGCAGCTCGTCAAGCAGATGCGACGGTTCTAGT GATGGGCCTGGACCAGTCCATTGAGGCTGAAACCGTGGACCGGGCTGGCTTGCTTCTTCCCGGGCGTCAACAAGACCTTG TGTCAAAGGTAGCAGCTGCCTCTAAGGGCCCAACCATTTTGGTCTTAATGTCTGGTGGGCCTGTGGATATAACTTTTGCA AAGAATGACCCACGAATTGTGGGCATCTTGTGGGCTGGATATCCTGGTCAAGCTGGTGGTGCTGCCATTGCAGATGTCTT ATTTGGAACAACTAATCCTGGTTTGTCAATAATTCCTCTTTCTCACTTCACTCATATTTTCAGTTCTCATAAGGCCCATT GTATGCCCAATTGAGCTATATGTATAAATGCATAGATGCTTTGATTATAATTATAACATGGGTATGGACAAAAAGAATAT AAAAACCTGACATGATGTTTCAATTTCAGGGGCAAGGCTACCAATGACATGGTACCCACAAGGCTACATTCAAAACTTGC CAATGACAAACATGGCAATGAGACCAAGCCGACCCACAGGGTACCCAGGAAGAACCTATCGATTCTACAAAGGTCCTGTG GTGTATCCATTTGGTTATGGATTGTCCTACACCCACTTTGTTCACACACTAGCTAGTGCACCCAAAGTGGTGTCTGTGCC TGTAGATGGCCATCGCCATGGAAATGTCTCAAACATTTCAAACAAGGCAATTAGAGTGACACATGCACGGTGTGGCAAGC TTTCTGTTAGCCTTCAAGTTGATGTTAAAAATGCTGGGTCCATAGATGGCACTCACACTTTGTTAGTGTTCACAACACCA CCTAGAGGTAATGGTCATTGGGCACCGCGCAAGCAACTAGTGGCGTTTGAGAAAGTTCATATTCCTGCTAAGGCTCAGCG GAGAGTGCGAGTTAACATTCATGTTTGCAAGCTTCTGAGTGTGGTTGATAGGTCTGGTATAAGGAGAATCCCAATGGGGG AACACAGGTTTCAAATTGGTGATATTGAACATTCTCTGTCACTTCAAGCAAAAACACTTGGAGTCATCAAATCCTGAAAT TTTGGGGAAACAATGAGAATATCACACAGCTAAACAACCTCAATCTATACATAATTGAATAATAGATATATAATGTGGGA GGGGCAATTGAAGTTTCACCTTTCAACAGCTTGCTTGAGGTCTTGGTCATCAATTCAAACTGCAAATTGTTGATGTGTTA TGGCTTCGAAGACAGGACATTAGTTTTTGATAGATTCATCAATTCATCAACCACAATCAAATAATGTAATGGTGTTGATT GCAATTTTGTTTGCCATTCTTTTTGTCTGTATAGTTACTAATATAGGACAATATACTTTTTTTTAATAATATAATTGTAA GATTTGTCGTAATCAAGGGATTCATATCATGATGTTCACGAAACAATTTTGAATGCATCAAAGAAATAACTTTTAGATCA AA
CDS sequence (LotjaGi5g1v0246000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTCCATGTCCTTACCCCTCATCGCCATTCTCTTTCTCCTCCTCATTTCCGGCAGCCAGGCACGTGAGCCTTTCGC CTGTGATCCGAAGAACACAACCACGACGAACTTGCCATTTTGCCGGGCATCGCTGGTAACAGGAGCCAGGGTTAATGACA TAATTGGAAGGTTGACACTACAAGAGAAGGTTAACTTGCTGGTGAACAATGCCGCGGCGGTTCCTAGGCTTGGAATCAAA GGCTATGAGTGGTGGTCGGAGGCACTACACGGTGTTTCAAATGTGGGTCCAGGAACCAAGTTTGGTGGCCAATTCCCTGC TGCAACTAGCTTCCCTCAAGTCATCACCACTGCTGCTTCATTCAATGCTTCATTGTGGGAAGCAATCGGACAGGTTGTTT CGGATGAAGCAAGAGCAATGTACAATGGAGGTATGGGTGGGCTCACATATTGGAGCCCAAACGTCAACATATTCAGGGAT CCACGATGGGGTCGTGGACAGGAGACTCCCGGTGAGGACCCAATTCTAGCCGGGAAGTATGCAGCTAGTTATGTAAGAGG ACTACAGGGAACAAACCGTAGTCGGTTGAAGGTGGCTGCTTCTTGCAAGCACTTCACAGCTTATGATCTTGATAATTGGA ACGGTGTGGATCGCTTTCACTTCAATGCAAAGGTGAGCAAGCAGGACATAGAAGACACGTTCAATGTGCCATTCAGGATG TGTGTGAAGGAAGGTAATGTGGCGAGTGTGATGTGTTCTTATAATCAAGTTAATGGTGTCCCTACCTGTGCAGACGCCAA CCTCCTCAAGAGAACTGTTCGTGGCCAATGGGGTCTTAATGGGTACATTGTATCAGACTGTGACTCTGTTGGGGTGTTCT ACACTAGCCAACATTACACATCAACACCAGAAGAAGCTGCTGCTGATGCCATTAAAGCAGGCTTGGATTTGGATTGTGGG CCTTTCTTAGGGGCCCATACACAGAATGCTGTCAAGAGAGGCCTGTTAAGTGAAGCTGATGTGAATGTTGCATTAGCAAA CACATTGACAGTTCAAATGAGGCTAGGGATGTTTGATGGCGAGCCATCAAGTCAAGCATATGGCAACCTTGGTCCAAGAG ATGTGTGCACCCAACCTCACCAAGAGCTAGCCCTTGAAGCTGCTAGACAAGGGATTGTGCTCCTAAAGAACAGTGGTCCC TCTTTGCCTCTCTCCACTCGACGCCATCGCACCCTGGCTATCATTGGGCCCAATTCTAATGCCACTGTCACAATGATAGG AAACTATGCTGGTATTGGTTGTAGATACACAAGCCCTTTAGAAGGAATAGGAAAGTACGCAAAGACTATCCACGAGCTCG GGTGTGCAAATGTGGCTTGCACTGATGACAAGCAATTCGGGTCAGCTCTGAATGCAGCTCGTCAAGCAGATGCGACGGTT CTAGTGATGGGCCTGGACCAGTCCATTGAGGCTGAAACCGTGGACCGGGCTGGCTTGCTTCTTCCCGGGCGTCAACAAGA CCTTGTGTCAAAGGTAGCAGCTGCCTCTAAGGGCCCAACCATTTTGGTCTTAATGTCTGGTGGGCCTGTGGATATAACTT TTGCAAAGAATGACCCACGAATTGTGGGCATCTTGTGGGCTGGATATCCTGGTCAAGCTGGTGGTGCTGCCATTGCAGAT GTCTTATTTGGAACAACTAATCCTGGGGCAAGGCTACCAATGACATGGTACCCACAAGGCTACATTCAAAACTTGCCAAT GACAAACATGGCAATGAGACCAAGCCGACCCACAGGGTACCCAGGAAGAACCTATCGATTCTACAAAGGTCCTGTGGTGT ATCCATTTGGTTATGGATTGTCCTACACCCACTTTGTTCACACACTAGCTAGTGCACCCAAAGTGGTGTCTGTGCCTGTA GATGGCCATCGCCATGGAAATGTCTCAAACATTTCAAACAAGGCAATTAGAGTGACACATGCACGGTGTGGCAAGCTTTC TGTTAGCCTTCAAGTTGATGTTAAAAATGCTGGGTCCATAGATGGCACTCACACTTTGTTAGTGTTCACAACACCACCTA GAGGTAATGGTCATTGGGCACCGCGCAAGCAACTAGTGGCGTTTGAGAAAGTTCATATTCCTGCTAAGGCTCAGCGGAGA GTGCGAGTTAACATTCATGTTTGCAAGCTTCTGAGTGTGGTTGATAGGTCTGGTATAAGGAGAATCCCAATGGGGGAACA CAGGTTTCAAATTGGTGATATTGAACATTCTCTGTCACTTCAAGCAAAAACACTTGGAGTCATCAAATCCTGA
Protein sequence (LotjaGi5g1v0246000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSMSLPLIAILFLLLISGSQAREPFACDPKNTTTTNLPFCRASLVTGARVNDIIGRLTLQEKVNLLVNNAAAVPRLGIK GYEWWSEALHGVSNVGPGTKFGGQFPAATSFPQVITTAASFNASLWEAIGQVVSDEARAMYNGGMGGLTYWSPNVNIFRD PRWGRGQETPGEDPILAGKYAASYVRGLQGTNRSRLKVAASCKHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFNVPFRM CVKEGNVASVMCSYNQVNGVPTCADANLLKRTVRGQWGLNGYIVSDCDSVGVFYTSQHYTSTPEEAAADAIKAGLDLDCG PFLGAHTQNAVKRGLLSEADVNVALANTLTVQMRLGMFDGEPSSQAYGNLGPRDVCTQPHQELALEAARQGIVLLKNSGP SLPLSTRRHRTLAIIGPNSNATVTMIGNYAGIGCRYTSPLEGIGKYAKTIHELGCANVACTDDKQFGSALNAARQADATV LVMGLDQSIEAETVDRAGLLLPGRQQDLVSKVAAASKGPTILVLMSGGPVDITFAKNDPRIVGILWAGYPGQAGGAAIAD VLFGTTNPGARLPMTWYPQGYIQNLPMTNMAMRPSRPTGYPGRTYRFYKGPVVYPFGYGLSYTHFVHTLASAPKVVSVPV DGHRHGNVSNISNKAIRVTHARCGKLSVSLQVDVKNAGSIDGTHTLLVFTTPPRGNGHWAPRKQLVAFEKVHIPAKAQRR VRVNIHVCKLLSVVDRSGIRRIPMGEHRFQIGDIEHSLSLQAKTLGVIKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| PANTHER | 7 | 770 | 764 | 0.0 | – | |
| PANTHER | 7 | 770 | 764 | 0.0 | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Phobius | 23 | 770 | 748 | - | – | |
| SUPERFAMILY | 38 | 391 | 354 | 8.0E-90 | ||
| Gene3D | 47 | 367 | 321 | 2.6E-88 | ||
| Pfam | 105 | 350 | 246 | 1.6E-39 | ||
| PRINTS | 111 | 130 | 20 | 3.8E-6 | ||
| PRINTS | 198 | 214 | 17 | 3.8E-6 | ||
| PRINTS | 272 | 290 | 19 | 3.8E-6 | ||
| Gene3D | 377 | 624 | 248 | 9.5E-64 | ||
| Pfam | 392 | 622 | 231 | 3.4E-52 | ||
| SUPERFAMILY | 392 | 625 | 234 | 1.96E-48 | ||
| Gene3D | 653 | 768 | 116 | 1.3E-11 | ||
| SMART | 684 | 755 | 72 | 5.6E-11 | ||
| Pfam | 685 | 753 | 69 | 1.8E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi5g1v0246000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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