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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0260800 |
| Transcript ID | LotjaGi5g1v0260800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein, putative; TAIR: AT5G20350.1 Ankyrin repeat family protein with DHHC zinc finger domain-containing protein; Swiss-Prot: sp|Q01484|ANK2_HUMAN Ankyrin-2; TrEMBL-Plants: tr|D3J163|D3J163_MEDTR Ankyrin repeat, PH and SEC7 domain secG-like protein; Found in the gene: LotjaGi5g1v0260800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56951400..56957427) extracted from Lotus japonicus Gifu genome v1.2.
TAAACATCAATCAAAATATAAATTAAAGAAATAGGGAAAAGATCCAAAGGAACAACAAACAACACCCTTCCAGCAAGGAA CTTTTTTCCTCCATAAATTGATTGATAAACCCGAAGTCAGAACAGAAACAACAAGAATAAGAACAACAAGGACCTTTCTC TAGTTTTGCACCACACCACCATGGACAGGTTGGTGAAACCAGAAGCACATGAAGTGGAACTCATGTTCCAGAAGGGCCAA AAGTGCAGCATGCACCACCTTCAAGCTCACGAATCTCATGCACCATGACCGTAGCAGTGTCCCCTAACCACCACAAACCC ATCACTTTTCTCCATCAACAAATTAAACCCTTCTCTGTAACTGTAAGCCCCAACCCTCTTCAGCCTTATACATCCTCCAC CACTCTCTCCACCTGGCCAACCCTCTCTCTCCAACCTTCTAACGTCAGAACCTCCATGCTCCCCACCGGCAAAGCCCCAC TGCCTCTTCTGCCGACCGGCCCCCAGTACTAAAACAAGACCATTTTATTCAGGGAGCCATTAAAGAAGAAGTAAGGGGAC AGGAAAATTAATACATCAAGTTAAGTTAATAGCTGATCATACAATACCAGCCAATCACTTTGGAGAGTGTTTTGAGGTAG AGAATGGTGGAGGTAGTCTCTGATGCTTCTTGGTTGCACCTTCATCGTAAGGGGTCAGTGGTACGCTAACTATGGAGGGT CATCAGATTGTCTGACACGTTGTATTCGGATTGACATCTTGTGACTATATTTTCATGTCGTTTAGCTGGTTGCCATTTAG AGCAACTTTATCCCTGGTTCTAAAAGTTAGTTCTTAGAAGTGTGCCCTTGAATCGCCAATTACTTAATGTACAACAAATA AGTGTGCCCATGAGTCATCAATTACTGCTTTTGACACTCTCACCATTCCAACTTTAATTTTCATAAGCTTAAAAGGATCC CTCAAGCCTCAACTTAAGCCTTCATCATATCCATCTTCAAAACACATATTTTCTCATTGTATTTTTTTTCACGTAATGAA AACACTCACATGCAATCAGCACATTATTAGTTTTTAACTGATTAGGAACAAAAGCACTTTGAGATTCATTAATAATATCA AGGAGGAAAAGTCTAAGCACATTAGCATTTGTCATTGTGACTAATTTGAATAAGACATTACATAAGCTAATAAGATTAAA TTGGTCAGGATGCAATGGCTTTTGAATCTTTGGAATAAAGACAATAAAAGTTTGATTTATAAAGCATGGATCAATATTCT TATTCAAAATGCTCAAAATAAGGCATAAGACATCTCCCCCAACATTATACCCCTTTTTTAAATAAAAAAGAGCACACATA TTATCTCTATTAGAAGCTTTCATAGGATGCATCTGACTAAGAGCACAAATTACATCTTCTCTCGAAAAATAATTTCACAA AATATTTAAATGATCGTTGATTACTCTACCATTTATGAGAGAAGTAATCTCAACGATATTTTGTGAAATAGAGGTATATA GTAAACAAATCATAGAAATATCTTATGACAACTTAATTGGCCTATATCTTCTTGGTCCTTACAAAATTCACCATCATCTC TAACCTTTTACCGACGCCCTACGTGGGGCAGTGAACCCTAATTACTAAATCTGAATCACAACTCAAACCAGAGACTTTAA GAATATAAAAGTGTGCATACTTTCTTGAATGTTTGACCCCCCCATATACACACACACCGTTGAGTTGTATGGTGTTGGTG GTGGCAGTGAGTGGTGATGATAACGACAACGTTTACATTGGTTAAATATGTTCACATAACTTATTTCTCACAATATTAAC ATAATATGTTGGATTAAATAATACTTCATTTTAATATATAAGATTGAATAAATGAACAAAGAGGATGTATCATGTGAGAA ATGTGTTTTTATGTGAGAACATGAGAATAAATCATGATCGTTAGATCTAATCATGAACGGTCCAGATTAAAACATTAAGT CATGTGAGTTTTTAAGAAAGTCACATGACTTTTTTAAGTGATCATGTGAGCATTAAATTGTTTTAATCTGGACCGTTCAT GACATGATCTAACGGTCATGATTTATTCTCATTTTCTCACATAAGAACATCTTTCTTTTGATACATCGGAAAAGTATAAG AACATCTTTCTCATATGATACATCCCCATGAAAAAATATATACAATACAATATAAACAAACTCAGAATATATTATGAAAA ATTATACCATTAAATCTAATACGGCCTACCAAATTAGTCATAAGTATTTAATCAAACTATGTCAAGACCTCCCTCTAGAA TATACTCCATCTAGTCAAATTGTACCAATCTAGAAAATTCTCACATAAAAGTTATTGCGTAGTCCGTTGATGCATATACT TTTATTATTCTTGGTCACAAATATATAAAGAATTGACGCATGGCTGCTGAATACGACCTCATCATTATACTAATAAAACT CTAAAACAACAGCTGCATTTTTTAATAAGCTTAGGCACTTGGTAATCCGTCAACACAAACGGCCAAAACACTACACAACA GAATATCTTTTCAGGGTTACCTGGGATTCGATGCTCCCATTTTCACTTTCTGTCCTGAGGATACAAAAATCTCAAACCCA AATATGACAATCCAACTAGCTTGGGGCTTTGTTTTTCTCTTCATCCATGTCCAACCTGTGAAAATCTCGTAGGTTTTTAT GCCATGAGTCATGACAAATTTTTTGAGTGATTACATAAAATGTTACAAGAATGTGATTCTAGTAGTTTTAACTTTTTTAG TTTAACCATCACTCCTTTTTTTTGTTACAAGAGGAAGAGTAGTTGAAGTATTGAACCATCACTCTAATCATGCTGTATAT AAAACATTTTCCATCCAAATATTAATAGGATGAATTGGTTCCAACTTCCAACTTAACTCTCTCCCCAGTAAGATTCTTCA TGGTTTGACTTTCAACCAGTTTGAAAAATTGACTTATACAAATATATGTTGGATCAAAATGGTTGGTTTTACTGGGAAAT CACTCAGCAAGACCCTTCCTTCAGAATCAGGCTATGCTATTTCACATTTGAATTGGAAATTGGTTCAAATTTGCAACTTC AAAGTCTTCACTTCACCCTTCCTTCTGCATTCCCTCATTGTCAATGTTCCCATTTTTCCTGTCAAAGTCACAACCCCAAC TAACTAGCATGCTACACAACCATATTAAAATTAATCAAACCTTATCACCCTAATAATAAATTAACAAAGGAAATTGTAAA CATCAATCAAAATATAAAATTTAACAAATAGGGAAATGATTCAAAGGAACAAAGAACAGCACCCTTCCAGCAACAACTAT ATTTCCTCCATAAATTGATTAGATAAACCCAAAGTCAGAACAGAAACAACAACAACACCAAGTAATAAGAACAAAAACCA AGAACCTTTCTCTACCTCAAACCACCATGGACAGGTTGGTGAAACCAGAAGCAAATGAAGTAGAAATCATGTTCCAGAAG AACCAAAAGTGCAGCACCACCTTCAAGCTCACAAACCTCATGCACACCATGACTGTGGCGGTTTCTCTAACCACCACAAA CCCATCAATTTTCACCATCAACAAGCCGTTATCTGTAATCCCACCACTCTCTTCAGCTTCATACACCCTCCACCTCACTC CGCCGGGACAACCACCTCTCTCCGACCCACCTGACGTCATCACCGTCAGAACCTCCATGCTGCCTACCGGAAAAGCCCCC ACCGACCACCTCCGCCGCCTGTTCTCCCGGCCGGGTCCTCATGTCTTTCGTGACGCCGTCATACCCATCACCCTCGTTGG CCCCCATGCCGTCGAGCTTCTCATCTCTGAACCCCTTCAAAGCCGTGACCTCTTCACCAAAGCCATATCCGCTTGCTCGA AGCCGCACCTCACGAATTTGCTGAAACTCGCCGTGGAAAGCGGGGAGGTTGACACCGTCGCCGCTCTCATCGCCGCCGGC GGAGACCCGAAAGGGCAGTCGCTGATTCCGTTGGCAATCAGAGCTGGGAAGCTTGAGTTGGTGAAGCTTCTGGTAGCTTC TGGGTGCAGAATCAACGACTCGGTGGAAGCGGGCGCGGTTTTGCTCGAAGCTGCGGCGGTGGATCGGATCGATGTGTTGG AGTTTTTGTTTGAGATTTTTGGTGAAGAATTGGATGTGAATTCGGCGAATTCGAAGGGGGTGACGCCGGTGCATGTGGCG GCGATGGAGGGTCACGTGAGGGTGATCGAGCTTCTGGTATCGAAGGGAGGGGACCCGGAAGCGGTTGACTCGGGAGGGTG GACGCCGCTGCACTTTGCGGCATGGCGGGGGCACCCTAAGGCGGTGGAGTGTTTGCTGGAACGCGCTGATACGAAGCGCG TGAGGGATAAGGAGGGGAGGACGCCGTTTTCAGTGGCGGCGGAGTGCGGGCACGCGCAGTTGCTTGGGATACTGCGGTGG AGCGACGGGCTGTACCGGGCGGCGAGGGCGGACGATGTTCATGGACTGAAGAGGTGTATAGCGGAAGGGGCTGCGGTGGG TGGGAGGGACCAGAATGGGTGGACGCCGCTGCACTGGGCCGCGTTCAAGGGCCGGATCAAGAGCGCGAAGGTGTTGCTGG AACACGGTGCGGTGGTTGATGCGGTTGATGATGCTGGCTACACTCCCCTGCATTGTGCGGCGGAGGCCGGGCACTTGCAG GTTGCTTTGTTGTTGATTGCTCATGGTGGCTCTCAGGCTAGTCTTAAGAGCTTTGAACATGTTGCTCCTCTGAACTTAAA TTCTTTTCAGAAACATGTCTCTCTTGATTATCAATGTAAGAGTATAGCTTGAGAAAGAGAGATCCTGTTGGGGTTTTTCA ATTTTTCCTTTTTAATGTACATTCATAGAGTTGTGAATTTTTGTATTTTACATTGTGAATGGTGGTTGATCAAATGATGA GGAGAAGAGGAAGAATGAGTAGCAGTGCTTGTGTTCTGCTCCCAATTAAGGTGTACATGGAGTTTAATAATACAGTTTCT TTTGGCTCTTGTATCTTCAGTTTCTTTTTGATGAATCCATTGTCTGCAATATATGCCACTATGTCAGGCAAAAGAGGCTT GTATTCTTTTTAGTTTCAATGAAGCAGCAAGTTGTTTTGAACTAATACATGGTGTGATTTGTGGGGACCCAATTGTATCT CTTCAATACACAATCATAAATTCTTTCTTTCAATCTTGGATGATTTTAGCAGATTTACTTGGGTGATACTGCTAAAAAGC TAGGCTGAAACACATGCTCCTTTGAAGAGCTTTATCCTATTAGTTGAGATACAACATAATGGTGGAATTAAGGCTATTAG ATCAGACACTAGGACAGAGTTGAAGCGAACTGGTTTTTATGCTTCAAAGGGATCAAGACCACCAATTCCACATGGACTTT TCTTGACCTACCCACACACATGCCAGACCATGCAAGTGTATCAAACCACATACTCCACTGCAAAGACTACCACTGCTCTC CCCTACCAACCAAATCCTCCACTGCAAACGCACTATCGGCACACTTCTCTTATTAGAACCTTTCACTCTCTCACCTTTTA TATTGCTTGTTCTTAACTTCAGACAGTGAACCTACTAGTTGCTCTGAGGCCAGCAACCATGAATCTGGCAGGCTGCTATA TCAGAAGAAATTCGAGCCTTGAACAGTTGAACTTAATGGAAATTGGTAGATTGTTGATCTTCTTGCAGGGGTTGTTTCTT TTGGAAGCAAATTATGAACTTAAGAGGAATGCAGCATAGACTGCTGCAAGGCCCAACTTGTGACTAAGGATTGCAATTAG AGAGAAGTTTTGTACTACTTTGAAAACTTTTCGCATGTGGTTAAGTTGACCACAGTGCGGATGTTACTTGCCTTTTCTCT CATTTGGCACTTGTATCAGCTTGAGCCTTGATGTAAACAATGTTTTTCTCTAGGGGGGTCTATAAGAAAATGTGTATAAT TGTATTTCTAATCCTAAGGGCCTCTCAG
CDS sequence (LotjaGi5g1v0260800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAGGTTGGTGAAACCAGAAGCAAATGAAGTAGAAATCATGTTCCAGAAGAACCAAAAGTGCAGCACCACCTTCAA GCTCACAAACCTCATGCACACCATGACTGTGGCGGTTTCTCTAACCACCACAAACCCATCAATTTTCACCATCAACAAGC CGTTATCTGTAATCCCACCACTCTCTTCAGCTTCATACACCCTCCACCTCACTCCGCCGGGACAACCACCTCTCTCCGAC CCACCTGACGTCATCACCGTCAGAACCTCCATGCTGCCTACCGGAAAAGCCCCCACCGACCACCTCCGCCGCCTGTTCTC CCGGCCGGGTCCTCATGTCTTTCGTGACGCCGTCATACCCATCACCCTCGTTGGCCCCCATGCCGTCGAGCTTCTCATCT CTGAACCCCTTCAAAGCCGTGACCTCTTCACCAAAGCCATATCCGCTTGCTCGAAGCCGCACCTCACGAATTTGCTGAAA CTCGCCGTGGAAAGCGGGGAGGTTGACACCGTCGCCGCTCTCATCGCCGCCGGCGGAGACCCGAAAGGGCAGTCGCTGAT TCCGTTGGCAATCAGAGCTGGGAAGCTTGAGTTGGTGAAGCTTCTGGTAGCTTCTGGGTGCAGAATCAACGACTCGGTGG AAGCGGGCGCGGTTTTGCTCGAAGCTGCGGCGGTGGATCGGATCGATGTGTTGGAGTTTTTGTTTGAGATTTTTGGTGAA GAATTGGATGTGAATTCGGCGAATTCGAAGGGGGTGACGCCGGTGCATGTGGCGGCGATGGAGGGTCACGTGAGGGTGAT CGAGCTTCTGGTATCGAAGGGAGGGGACCCGGAAGCGGTTGACTCGGGAGGGTGGACGCCGCTGCACTTTGCGGCATGGC GGGGGCACCCTAAGGCGGTGGAGTGTTTGCTGGAACGCGCTGATACGAAGCGCGTGAGGGATAAGGAGGGGAGGACGCCG TTTTCAGTGGCGGCGGAGTGCGGGCACGCGCAGTTGCTTGGGATACTGCGGTGGAGCGACGGGCTGTACCGGGCGGCGAG GGCGGACGATGTTCATGGACTGAAGAGGTGTATAGCGGAAGGGGCTGCGGTGGGTGGGAGGGACCAGAATGGGTGGACGC CGCTGCACTGGGCCGCGTTCAAGGGCCGGATCAAGAGCGCGAAGGTGTTGCTGGAACACGGTGCGGTGGTTGATGCGGTT GATGATGCTGGCTACACTCCCCTGCATTGTGCGGCGGAGGCCGGGCACTTGCAGGTTGCTTTGTTGTTGATTGCTCATGG TGGCTCTCAGGCTAGTCTTAAGAGCTTTGAACATGTTGCTCCTCTGAACTTAAATTCTTTTCAGAAACATGTCTCTCTTG ATTATCAATGTAAGAGTATAGCTTGA
Protein sequence (LotjaGi5g1v0260800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDRLVKPEANEVEIMFQKNQKCSTTFKLTNLMHTMTVAVSLTTTNPSIFTINKPLSVIPPLSSASYTLHLTPPGQPPLSD PPDVITVRTSMLPTGKAPTDHLRRLFSRPGPHVFRDAVIPITLVGPHAVELLISEPLQSRDLFTKAISACSKPHLTNLLK LAVESGEVDTVAALIAAGGDPKGQSLIPLAIRAGKLELVKLLVASGCRINDSVEAGAVLLEAAAVDRIDVLEFLFEIFGE ELDVNSANSKGVTPVHVAAMEGHVRVIELLVSKGGDPEAVDSGGWTPLHFAAWRGHPKAVECLLERADTKRVRDKEGRTP FSVAAECGHAQLLGILRWSDGLYRAARADDVHGLKRCIAEGAAVGGRDQNGWTPLHWAAFKGRIKSAKVLLEHGAVVDAV DDAGYTPLHCAAEAGHLQVALLLIAHGGSQASLKSFEHVAPLNLNSFQKHVSLDYQCKSIA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 2 | 124 | 123 | 12.264 | ||
| Gene3D | 5 | 121 | 117 | 2.0E-5 | ||
| SUPERFAMILY | 10 | 129 | 120 | 2.88E-7 | ||
| PANTHER | 32 | 306 | 275 | 7.2E-67 | – | |
| PANTHER | 32 | 306 | 275 | 7.2E-67 | – | |
| Gene3D | 132 | 340 | 209 | 1.0E-39 | ||
| SUPERFAMILY | 159 | 432 | 274 | 1.55E-55 | ||
| ProSiteProfiles | 182 | 435 | 254 | 52.417 | ||
| ProSiteProfiles | 182 | 214 | 33 | 8.683 | ||
| SMART | 182 | 211 | 30 | 23.0 | ||
| Pfam | 222 | 308 | 87 | 7.9E-14 | ||
| SMART | 250 | 279 | 30 | 4.1E-5 | ||
| ProSiteProfiles | 250 | 282 | 33 | 13.891 | ||
| PRINTS | 251 | 266 | 16 | 2.9E-5 | ||
| SMART | 283 | 312 | 30 | 0.0042 | ||
| ProSiteProfiles | 283 | 315 | 33 | 10.526 | ||
| PANTHER | 311 | 441 | 131 | 7.2E-67 | – | |
| PANTHER | 311 | 441 | 131 | 7.2E-67 | – | |
| Gene3D | 341 | 454 | 114 | 5.5E-27 | ||
| Pfam | 342 | 430 | 89 | 5.2E-14 | ||
| ProSiteProfiles | 370 | 402 | 33 | 13.811 | ||
| SMART | 370 | 399 | 30 | 6.0E-6 | ||
| PRINTS | 386 | 400 | 15 | 2.9E-5 | ||
| ProSiteProfiles | 403 | 435 | 33 | 10.606 | ||
| SMART | 403 | 432 | 30 | 6.6E-4 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0260800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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