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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0268700 |
| Transcript ID | LotjaGi5g1v0268700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein, putative; TAIR: AT1G68780.1 RNI-like superfamily protein; Swiss-Prot: sp|Q5PP26|PII2_ARATH Piriformospora indica-insensitive protein 2; TrEMBL-Plants: tr|V7BH35|V7BH35_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0268700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:58161666..58164683) extracted from Lotus japonicus Gifu genome v1.2.
TGATACATAGCTTCCATAATACCCATCACCCATCTAATGATATTCAATAATATGATGCAAATTGCATAGCATAGCTGCAT TGAAAAGGAAAGCCTAAGTTTAAAAAAAATTTGCTCTCATTTTTAAAGCCTATTTCTGCTTTTTCATTTGATAGGTCTCT CAGCTATTAGTTACAGCTCTTCTGATCATATTAAATTAAAGCCATTGTTATTATGACTTGGAGCTTTGAGAACTGTGATG AGATATTGTGTTCTTTCTTACAGTTATATATATACTTCCTTAGTTTTTCCATAAACACAAGGAAGAAAGAAGTCAGGGTT TCTTGCTCAGCTTTTGTGTTTCCTCCATTCCCTTTTTCCTATTCAGTTTAAGCATAAATTCAGGATCTTGTTCTTTCTTT CTTCATACTACAATCTGTGTTCTTCCAGAAACGCCAGTAATTTTCTGTAAGGGTCCATCTTGGTGGGGTATTTGTCTTCA TATCCTCTTCATTGTTAGAAGGATTAAGTCACCCCCCTGTTACAATTTAGTTATAGATTGTCTCTTTTTTTTCTTAAAAG AGAAAAATGCTCATGTAAGGCACAAAAACCATAAGAGATGCTCTTGAATGCAAGCCAAGCACCTTCTACTTGTTTTTGTC AATTCTGCTTCAACAATTTTCAACTTCTCCTGTGCCAAATCCTGTTTTGAATCAATACAACATCATGAAGAACATCAAGG GAATTAGCAATGCTATTTTTATCATGTTCATCCTCTCTCTGAGTGCAAGTTGTTATGGACAAGAAGACTTTGATGTTGAT GCAGCTGCTCCAATGGAGAAAACAGAACAAGAGGCTCTGTACTCCACAATTCAAGGCTTTGTTGGCAATTCATGGAATGG CTCAGATCTTTATCCAGACCCTTGTGGTTGGACTCCTATTCAGGTATATATATATATATATATACAGTGTTAACTACCTT TTTACTGTGATAGCTTGAACAGTTCAAATTTGTTTCTGGTTGAAGTCTTATAATCATAAGTTCATTGCTACTTGATGACT TCAAAAGCCTCCTAGGTGTCTGAGTTAATGACTTGCAGACACTTTTTTCAAAATTAAAAGTGAAGCTTTGAGCACAAGCT CCCTTCTTCTATTAGTTCTTGAAGATTTTGCCTGATGGGTCCATAAATGAGGTTTTGGACTTAATTTTATAAATGAATTC TGGGGTGAAATTAAGCTTTCTTAAAATTCTAGTGTTAGTCCCTTGCCTAAATTGTTAGTGTAGAAGATTACATGCTGCTC CAACTATGTTCATTGTCTAATAAACCATGTAATAGCATGTTTAAATTAGCTTCTCTCTTCTCAGAATCAATTACGGAACC CAAAAGCTACTCACATAAGCTTCTCTCCCGGATTGATTCTGCTTCAAATCAATTCTGAAACTATAAAATTTGTAGAATAT GATGATCAATTATTTGTTTAACTATTCACCCTTTGTTGTTTTCAACTGCAGGGTGTCTCTTGTGATCTGTTTGATGGATT TTGGTATGTTACTGTCTTGAACATTGGACCAATCGTTGACAATTCTCTGAGATGTACACAATATGTGGAATTTAGGCCAC AGTTATTCAAGCTCAAGCACCTCAAAGTTCTATCCTTCTTCAATTGTTTTCAATCACAAACCAAGCTTCCAATTTCCATC CCCACTGGAAACTGGGAGAAACTATCAGGCAGCTTAGAATCACTGGAGTTCAGATCAAACCCAGGTCTCATTGGAAGAAT TCCATCAAGTTTTGGGGTCCTCCAGAACCTCCAATCACTGGTGTTGCTAGAGAATGGGTTAACAGGTGAAATACCACCAA ACATTGGCAATCTTACCAAGTTGAAGAGACTTGTTCTTTCTGGAAACTATCTTTCTGGGAGGATTCCTGATATTTTTGGA GGGTTAAAAGAGTTATTAATCCTTGATTTAAGTAGAAACTCATTGTCTGGACCTTTGCCTTTGACAATTGGAAGCTTAAG TTCAGTGTTGAAGCTTGATGTAGGCCACAACGTTCTGGAAGGGAATCTGCTAAATGAGTTTGCTAATCTTAAGAATCTGA CCCTTATGGACCTTAGGAATAACAGATTCTCTGGGGGGTTGACATTGTCTTTGCAAGAGATGTGTTCCTTAGAAGAAATG GTTTTATCCAACAATCAAATTGGTGGTGACATCAGGATCCTAAAGTGGGAAAATCTTAAGAGCTTGGCCATTTTGGATCT CTCTAACATGGGGCTTGCAGGGGAAATTCCTGAGTCCTTATCAGAATTAAAGAGGTTGAGATTTTTGGGTCTTAGTGACA ACAACCTCACAGGAAACCTGTCACCAAAGCTAGAAACTCTTCCTTGTCTTAATGCACTCTACCTAAGTGGAAACAATCTT TCAGGAGAGCTTAAATTCTCTAATGAGTTTTTTGGGAAAATGGGAAGACGTTTTGGTGCCTGGAACAACCCCAACCTTTG TTATCAACCAGATGGAGTAATGTCAACAAACCATGTTCCAAATGGGGTTAAGGCATGCCAGCATGGGGTGAATTTGCTAG AGTCTAACACAAAAACTAAGCTTTTCAATGGGAATATGGACCAAACTTCCCAATTCATAAGCTCTATGGGAATTTCTAGT TGTGCTACTAATGGCTTCTGGTGGATTTTTCTGGTAGAAATATTGATGATAGGTCTATTCCTAAACACTTAAATAGCTCT TTAACCAAGAAGAGTTCAACTTTGGCTTTAACTTTTTAGTTGGTACAATGTTACATCAAGTTGTATGTCTTATGTATCTT GTTCTAACATAATCTGATAGTCTTGTCAATTAATTTATTAGCCAGCAAGTTAGTTATCTTAACTTCAACACTGCGGCTCA TTTAATTCCTTTCTTCAATGTCTGTATAATATAGTTATCTTTAATATCTGTATAATATCTGAGTTAGTGCATGTTTTAAA ACTCTTATACAATTGATACATGCGAAGACTGGCTTTGCCATGTACAACAGGAAACCAT
CDS sequence (LotjaGi5g1v0268700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAACATCAAGGGAATTAGCAATGCTATTTTTATCATGTTCATCCTCTCTCTGAGTGCAAGTTGTTATGGACAAGA AGACTTTGATGTTGATGCAGCTGCTCCAATGGAGAAAACAGAACAAGAGGCTCTGTACTCCACAATTCAAGGCTTTGTTG GCAATTCATGGAATGGCTCAGATCTTTATCCAGACCCTTGTGGTTGGACTCCTATTCAGGGTGTCTCTTGTGATCTGTTT GATGGATTTTGGTATGTTACTGTCTTGAACATTGGACCAATCGTTGACAATTCTCTGAGATGTACACAATATGTGGAATT TAGGCCACAGTTATTCAAGCTCAAGCACCTCAAAGTTCTATCCTTCTTCAATTGTTTTCAATCACAAACCAAGCTTCCAA TTTCCATCCCCACTGGAAACTGGGAGAAACTATCAGGCAGCTTAGAATCACTGGAGTTCAGATCAAACCCAGGTCTCATT GGAAGAATTCCATCAAGTTTTGGGGTCCTCCAGAACCTCCAATCACTGGTGTTGCTAGAGAATGGGTTAACAGGTGAAAT ACCACCAAACATTGGCAATCTTACCAAGTTGAAGAGACTTGTTCTTTCTGGAAACTATCTTTCTGGGAGGATTCCTGATA TTTTTGGAGGGTTAAAAGAGTTATTAATCCTTGATTTAAGTAGAAACTCATTGTCTGGACCTTTGCCTTTGACAATTGGA AGCTTAAGTTCAGTGTTGAAGCTTGATGTAGGCCACAACGTTCTGGAAGGGAATCTGCTAAATGAGTTTGCTAATCTTAA GAATCTGACCCTTATGGACCTTAGGAATAACAGATTCTCTGGGGGGTTGACATTGTCTTTGCAAGAGATGTGTTCCTTAG AAGAAATGGTTTTATCCAACAATCAAATTGGTGGTGACATCAGGATCCTAAAGTGGGAAAATCTTAAGAGCTTGGCCATT TTGGATCTCTCTAACATGGGGCTTGCAGGGGAAATTCCTGAGTCCTTATCAGAATTAAAGAGGTTGAGATTTTTGGGTCT TAGTGACAACAACCTCACAGGAAACCTGTCACCAAAGCTAGAAACTCTTCCTTGTCTTAATGCACTCTACCTAAGTGGAA ACAATCTTTCAGGAGAGCTTAAATTCTCTAATGAGTTTTTTGGGAAAATGGGAAGACGTTTTGGTGCCTGGAACAACCCC AACCTTTGTTATCAACCAGATGGAGTAATGTCAACAAACCATGTTCCAAATGGGGTTAAGGCATGCCAGCATGGGGTGAA TTTGCTAGAGTCTAACACAAAAACTAAGCTTTTCAATGGGAATATGGACCAAACTTCCCAATTCATAAGCTCTATGGGAA TTTCTAGTTGTGCTACTAATGGCTTCTGGTGGATTTTTCTGGTAGAAATATTGATGATAGGTCTATTCCTAAACACTTAA
Protein sequence (LotjaGi5g1v0268700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKNIKGISNAIFIMFILSLSASCYGQEDFDVDAAAPMEKTEQEALYSTIQGFVGNSWNGSDLYPDPCGWTPIQGVSCDLF DGFWYVTVLNIGPIVDNSLRCTQYVEFRPQLFKLKHLKVLSFFNCFQSQTKLPISIPTGNWEKLSGSLESLEFRSNPGLI GRIPSSFGVLQNLQSLVLLENGLTGEIPPNIGNLTKLKRLVLSGNYLSGRIPDIFGGLKELLILDLSRNSLSGPLPLTIG SLSSVLKLDVGHNVLEGNLLNEFANLKNLTLMDLRNNRFSGGLTLSLQEMCSLEEMVLSNNQIGGDIRILKWENLKSLAI LDLSNMGLAGEIPESLSELKRLRFLGLSDNNLTGNLSPKLETLPCLNALYLSGNNLSGELKFSNEFFGKMGRRFGAWNNP NLCYQPDGVMSTNHVPNGVKACQHGVNLLESNTKTKLFNGNMDQTSQFISSMGISSCATNGFWWIFLVEILMIGLFLNT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 23 | 23 | 6.0 | – | |
| SignalP_GRAM_NEGATIVE | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 10 | 20 | 11 | - | – | |
| PANTHER | 13 | 453 | 441 | 1.9E-150 | – | |
| PANTHER | 13 | 453 | 441 | 1.9E-150 | – | |
| Phobius | 21 | 25 | 5 | - | – | |
| Phobius | 26 | 460 | 435 | - | – | |
| Gene3D | 34 | 212 | 179 | 2.6E-25 | ||
| SUPERFAMILY | 46 | 380 | 335 | 7.57E-53 | – | |
| Pfam | 196 | 255 | 60 | 1.0E-7 | ||
| Gene3D | 213 | 310 | 98 | 2.0E-21 | ||
| Gene3D | 311 | 408 | 98 | 1.0E-17 | ||
| Phobius | 461 | 478 | 18 | - | – | |
| TMHMM | 461 | 478 | 18 | - | – | |
| Phobius | 479 | 479 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0268700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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