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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0295600 |
| Transcript ID | LotjaGi5g1v0295600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family member; TAIR: AT5G52860.1 ABC-2 type transporter family protein; Swiss-Prot: sp|Q9FLX5|AB8G_ARATH ABC transporter G family member 8; TrEMBL-Plants: tr|G7IDX8|G7IDX8_MEDTR White-brown-complex ABC transporter family protein; Found in the gene: LotjaGi5g1v0295600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61291598..61294206) extracted from Lotus japonicus Gifu genome v1.2.
ATGACATACATCACATACTACATCTCCCACTTATTTTCACTCCTCTTTGTACCATGATGTCTATACCAATATGGTGTACT CCAAACCATTATTGATATCTATGGTTCACGGATTGTAGATGTCCTTGTTTCAACATTGTTTCCATGAAGTAAAATATAGC AAATTGCAACAACTACCAAAGGTCTAAACGCCTTTTTAATTCTATTTTTTGTCCCTCTTTATCATCCTCCAACACTATAC TCCAACACATGGAACGGATCATTGTATCAAGCATCAACACTCCCACAATCTTCACAACTCCAATCTCTTTCACTTCTTAG CAACCACCTCCATGGCAGAGCACCCACCATCACCAAAAGCTTACAAACTAACAGCCACTTCAATCTCCTACACCAAATCA ACCACCACCACCACTTCATTCTTCCTCTTCAAACACTGCACACCAACCCCACCAACTCACATCCTCAAAGATGTCTCCCT CACCGCCTACCCCTCCGAGATCCTCGCCGTCGTCGGCCCCAGTGGCGCCGGAAAGTCCACTCTTCTCGACATCCTCTCCG CTCGAAGATCGCCTTCGAGTGGCACTCTCTCCCTCAACTCCTCCCCTCTCAACCCTTCATCCTTCCGCAAACTCTCTGCC TATGTCCCTCAACACGATGCATGCCTTCCTCTGCTCACAGTTTCTGAAACCTTCGCCTTCTCTGCTCGCCTTCTAAAGCC TAAAACCTCTGACATCGCAGCCATTGTTTCCGCTCTTCTCTCCGAGCTGAGACTCACCCATTTGGCTAACACAAGGCTAG CTCATGGCCTCTCCGGTGGAGAACGCAGAAGGGTCTCAATTGGCCTAAGCCTCCTTCATGATCCTGCAGTTCTGCTCCTT GATGAACCTACCTCTGGCCTTGACAGCACCTCTGCTTTCAAAGTCATGCAGATTCTCAAATCAACTTGTGTTTCAAGAAA CAGGACAATCATCCTCTCAATTCACCAACCAAGCTTCAAAATCCTCTCCTGCATTGACAAAGTCTTGCTTCTGTCAAAAG GGACTGTGGTTCACCATGGAAGCCTTGCTTCACTGCAATCCTTCCTTCACACAAAAGGGTTCACTGTTCCTCATCAGCTC AACGCATTGGAGTATGCCATGGAAATACTAAACCAGCTGAATGAGGCTAACCCCACGACTCTGCCAATTCTCCCTGAATC ACCTTCTACAAACTCTGTTTCTGATCACAATGGAACTCAAAACAGAGAGATCAGGTACCAGAGCTCAAGGATTCATGAAA TTCACACTCTTTACATCAGGTTTTGGAAGGTGATTTACAGAACTAAGCAGCTTCTTTTCACAAACACACTAGAAGCACTG GTTGTGGGTCTTGTTTTAGGAACAATTTACATCAACATTGGGTTTGACGAGGAAAGCATTCAGAAAAGGTTTGGTCTATT TGCATTCACTCTCACATTTCTCCTATCTTCCACAACAGAGACACTTCCCATCTTCATCAATGAGAGGCCAATCTTGCTGA GAGAAACTTCAAGTGGGGTTTACAGGCTCTCATCTTATCTCATTGCAAACACTCTTGTTTTCTTGCCATACTTGTTTGTA GTTGCTGTCATATACTCTATTCCTGTCTACTTCTTAGTGGGACTCTGTTCATCTTGGCTCTCTTTTGCTTACTTTGTTCT TGTCATATGGGTCATAGTTCTAATGGCAAATTCCTTTGTCCTGTTCTTGAGTTCTCTTGCACCTAACTACATTTCTGGAA CTTCACTCTTGACAGTGCTTCTTGCAGCGTTTTTTCTCTTCTCTGGCTACTTTATCTCAAAACAGAACATGCCCAAGTAC TGGCTTTTCATGCATTTCTTGTCCATGTACAAATATGCTCTTGATGCACTTCTTATCAATGAGTACTCTTGCTTGGTTAC AAAGTGTTTGTTGTGGTATGAAGAGAATAATCAGGAGTGCATGATTACTGGCGGTGACGTGCTGCGCCAGAGAGGGCTCA GCGAGAGAGAAAGATGGAGCAATGTGTACTTTTTGATTGGGTTCTTTGTGTTTTACAGAGTGCTATGTTTCTTGGTTTTG ATTAGAAGAGTTTCAAGATCCAAAACTTGATGAAGACCATGAAATGATCAAATTATGCTAGCATTTCAGTATTTTTTCTT CTTCTTCATTTCTGATTTTGTTGTTTTGTTTGATCTGCTTTGAATGAAGTATATAATCTTGAATACAGACACAGAGAAAG TTTGTTTCATAGATATGAAGTTGACCCTTCATTCTCATCTTTTTCCCAGTGTAGTTACCAATTCTTAATTAGATATATGA TGTTCCCTCTCCTTGAAACCTCATAATTTGGATGAGTTGGTATCATGGTGTGATATTTCATAGAGATGCAAGTGGACAAG CTGCATGTACTTAAGAATGCGACGTTTCCTATTTTAGGCAATATGATAGGCATGCATTATTGCAAACGTTTTTTTGGTTA AGTTCAGTTTTTTTTCTTTCTCTTCTGTCATATGAAGTTTGAACTTTCAAAGGAAAATGATCCCTAGACGCAACTTTTGG GCAAAATTTGACTAAAAATCACCACAAATTTCAAGTGTTATATATCCGG
CDS sequence (LotjaGi5g1v0295600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAGCACCCACCATCACCAAAAGCTTACAAACTAACAGCCACTTCAATCTCCTACACCAAATCAACCACCACCAC CACTTCATTCTTCCTCTTCAAACACTGCACACCAACCCCACCAACTCACATCCTCAAAGATGTCTCCCTCACCGCCTACC CCTCCGAGATCCTCGCCGTCGTCGGCCCCAGTGGCGCCGGAAAGTCCACTCTTCTCGACATCCTCTCCGCTCGAAGATCG CCTTCGAGTGGCACTCTCTCCCTCAACTCCTCCCCTCTCAACCCTTCATCCTTCCGCAAACTCTCTGCCTATGTCCCTCA ACACGATGCATGCCTTCCTCTGCTCACAGTTTCTGAAACCTTCGCCTTCTCTGCTCGCCTTCTAAAGCCTAAAACCTCTG ACATCGCAGCCATTGTTTCCGCTCTTCTCTCCGAGCTGAGACTCACCCATTTGGCTAACACAAGGCTAGCTCATGGCCTC TCCGGTGGAGAACGCAGAAGGGTCTCAATTGGCCTAAGCCTCCTTCATGATCCTGCAGTTCTGCTCCTTGATGAACCTAC CTCTGGCCTTGACAGCACCTCTGCTTTCAAAGTCATGCAGATTCTCAAATCAACTTGTGTTTCAAGAAACAGGACAATCA TCCTCTCAATTCACCAACCAAGCTTCAAAATCCTCTCCTGCATTGACAAAGTCTTGCTTCTGTCAAAAGGGACTGTGGTT CACCATGGAAGCCTTGCTTCACTGCAATCCTTCCTTCACACAAAAGGGTTCACTGTTCCTCATCAGCTCAACGCATTGGA GTATGCCATGGAAATACTAAACCAGCTGAATGAGGCTAACCCCACGACTCTGCCAATTCTCCCTGAATCACCTTCTACAA ACTCTGTTTCTGATCACAATGGAACTCAAAACAGAGAGATCAGGTACCAGAGCTCAAGGATTCATGAAATTCACACTCTT TACATCAGGTTTTGGAAGGTGATTTACAGAACTAAGCAGCTTCTTTTCACAAACACACTAGAAGCACTGGTTGTGGGTCT TGTTTTAGGAACAATTTACATCAACATTGGGTTTGACGAGGAAAGCATTCAGAAAAGGTTTGGTCTATTTGCATTCACTC TCACATTTCTCCTATCTTCCACAACAGAGACACTTCCCATCTTCATCAATGAGAGGCCAATCTTGCTGAGAGAAACTTCA AGTGGGGTTTACAGGCTCTCATCTTATCTCATTGCAAACACTCTTGTTTTCTTGCCATACTTGTTTGTAGTTGCTGTCAT ATACTCTATTCCTGTCTACTTCTTAGTGGGACTCTGTTCATCTTGGCTCTCTTTTGCTTACTTTGTTCTTGTCATATGGG TCATAGTTCTAATGGCAAATTCCTTTGTCCTGTTCTTGAGTTCTCTTGCACCTAACTACATTTCTGGAACTTCACTCTTG ACAGTGCTTCTTGCAGCGTTTTTTCTCTTCTCTGGCTACTTTATCTCAAAACAGAACATGCCCAAGTACTGGCTTTTCAT GCATTTCTTGTCCATGTACAAATATGCTCTTGATGCACTTCTTATCAATGAGTACTCTTGCTTGGTTACAAAGTGTTTGT TGTGGTATGAAGAGAATAATCAGGAGTGCATGATTACTGGCGGTGACGTGCTGCGCCAGAGAGGGCTCAGCGAGAGAGAA AGATGGAGCAATGTGTACTTTTTGATTGGGTTCTTTGTGTTTTACAGAGTGCTATGTTTCTTGGTTTTGATTAGAAGAGT TTCAAGATCCAAAACTTGA
Protein sequence (LotjaGi5g1v0295600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEHPPSPKAYKLTATSISYTKSTTTTTSFFLFKHCTPTPPTHILKDVSLTAYPSEILAVVGPSGAGKSTLLDILSARRS PSSGTLSLNSSPLNPSSFRKLSAYVPQHDACLPLLTVSETFAFSARLLKPKTSDIAAIVSALLSELRLTHLANTRLAHGL SGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMQILKSTCVSRNRTIILSIHQPSFKILSCIDKVLLLSKGTVV HHGSLASLQSFLHTKGFTVPHQLNALEYAMEILNQLNEANPTTLPILPESPSTNSVSDHNGTQNREIRYQSSRIHEIHTL YIRFWKVIYRTKQLLFTNTLEALVVGLVLGTIYINIGFDEESIQKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETS SGVYRLSSYLIANTLVFLPYLFVVAVIYSIPVYFLVGLCSSWLSFAYFVLVIWVIVLMANSFVLFLSSLAPNYISGTSLL TVLLAAFFLFSGYFISKQNMPKYWLFMHFLSMYKYALDALLINEYSCLVTKCLLWYEENNQECMITGGDVLRQRGLSERE RWSNVYFLIGFFVFYRVLCFLVLIRRVSRSKT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 333 | 333 | - | – | |
| PANTHER | 5 | 589 | 585 | 4.6E-269 | – | |
| PANTHER | 5 | 589 | 585 | 4.6E-269 | – | |
| ProSiteProfiles | 13 | 261 | 249 | 20.195 | ||
| Gene3D | 32 | 282 | 251 | 1.3E-57 | – | |
| SUPERFAMILY | 40 | 253 | 214 | 2.48E-48 | ||
| Pfam | 45 | 188 | 144 | 1.2E-28 | ||
| SMART | 54 | 238 | 185 | 2.0E-8 | ||
| ProSitePatterns | 160 | 174 | 15 | - | ||
| Pfam | 316 | 525 | 210 | 1.4E-45 | ||
| Phobius | 334 | 355 | 22 | - | – | |
| TMHMM | 336 | 358 | 23 | - | – | |
| Phobius | 356 | 366 | 11 | - | – | |
| TMHMM | 367 | 389 | 23 | - | – | |
| Phobius | 367 | 389 | 23 | - | – | |
| Phobius | 390 | 408 | 19 | - | – | |
| Phobius | 409 | 436 | 28 | - | – | |
| TMHMM | 415 | 437 | 23 | - | – | |
| Phobius | 437 | 444 | 8 | - | – | |
| TMHMM | 442 | 464 | 23 | - | – | |
| Phobius | 445 | 467 | 23 | - | – | |
| Phobius | 468 | 472 | 5 | - | – | |
| Phobius | 473 | 495 | 23 | - | – | |
| TMHMM | 474 | 496 | 23 | - | – | |
| Phobius | 496 | 514 | 19 | - | – | |
| Phobius | 515 | 536 | 22 | - | – | |
| Phobius | 537 | 564 | 28 | - | – | |
| TMHMM | 562 | 584 | 23 | - | – | |
| Phobius | 565 | 584 | 20 | - | – | |
| Phobius | 585 | 592 | 8 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi5g1v0295600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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