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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0296600 |
Transcript ID | LotjaGi5g1v0296600.1 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Heat shock protein 90; TAIR: AT5G52640.1 heat shock-like protein; Swiss-Prot: sp|P51819|HSP83_IPONI Heat shock protein 83; TrEMBL-Plants: tr|A0A0A0L6P6|A0A0A0L6P6_CUCSA Uncharacterized protein; Found in the gene: LotjaGi5g1v0296600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61348275..61351191) extracted from Lotus japonicus Gifu genome v1.2.
GAAGAATCCAGAGCTCTCTATTTCATTAACATTCGCTTCTGCTTAATGCTATTTAAATCCCCTTCTTCATCTCCCTTCTC TCAACAAATAACATCGCTAGCTTTCTAAGCTCACATATTTTGGTGTTCCAAGTGCGGAGTTAGATTCCCACATTAATTTC GTAATGGCAGATGTTCAAATGTGTGACGCCGAGACCTTCGCATTCCAGGCTGAGATCAACCAACTCCTCAGCCTCATCAT CAACACCTTCTACAGCAACAAGGAGATTTTCCTCCGTGAACTCATCAGTAATGCCTCCGACGTAAGCCTCTCCTCCTTCC ACCACCACCATTAACATTTTACTTTCCTTCGTTTCGTTAATCACTCAATTTGATTTGTGTGTTTGTTACATTTAGGCTCT GGATAAAATTCGATTTGAGAGCCTCACCGATAAGACGAAGCTTGATGCTCAACCAGAGCTTTTCATTAGACTCGTTCCTG ACAAGGCTAACAAGACTCTCTCCATCATTGACAGTGGCGTTGGCATGACCAAAGCAGGTACGTAGTTGTAATGTACCTCT TTATCCGTTTTATTTAAATTGAGGTTGCGATCGCGGTTGCAGTTGTCGCGGAATTGTAGACAAATGCAGGTTGATGCGGC CGCAACTGGGTGTGACCCTGAAATATATTATGTTGCGGCCGCAATTTGAAACAATGGTTTTATTGTGAGAATTTGATTAA ATGTGCTGTGCTATGCTTCTTATTGTGTGTGTTTATGTGGTGTGGTTTGGTTTCAGATTTGGTGAACAATTTGGGAACCA TTGCGAGGTCTGGGACGAAGGAATTCATGGAAGCGTTACAGGCTGGGGCTGATGTTAGCATGATTGGCCAATTTGGCGTT GGTTTCTACTCTGCTTACCTTGTTGCTGAGAAGGTCATTGTGACCACCAAGCACAATGACGATGAACAGTACATTTGGGA ATCACAGGCTGGTGGATCCTTCACTGTGATCAGGGATGTGAATGGTGAACAATTAGGAAGAGGAACTAAGATTACCTTGT TCCTCAAGGAGGATCAGGTAAAGAAATTGAAGTTTTAACTACGATTGTTTTTTCTTTTTCTTTTGGGTGTTTGTTTTAGT CAAATTGTTAATTGGTTGAGTCTTGTTTGTGCAACAGTTGGAGTATTTGGAGGAGAGAAGGATTAAGGATCTTGTGAAGA AGCACTCTGAATTCATTAGCTATCCAATTTACCTCTGGACTGAGAAGACAACTGAGAAGGAGATCAGTGATGATGAGGAG GATGATGAGTCCAAGAAGGAGAAGGAAGGAGAAGTTGAGGATGTTGATGAAGAGAAGGAGAAGGATTCTAAGAAGAAGAA GATTAAGGAGGTTTCTCATGAGTGGGAACTCATCAACAAGCAGAAACCAATCTGGCTGCGAAAGCCAGAGGAGATTACCA AGGATGAGTATGCTTCCTTCTACAAGAGCCTCACCAATGACTGGGAAGACCACTTGGCTGTCAAGCATTTCTCAGTGGAG GGTCAGCTTGAGTTCAAGGCCATTCTATTTGTTCCCAAAAGGGCACCTTTTGATCTGTTTGACACAAGAAAGAAGATGAA CAACATCAAGCTTTATGTGAGGAGGGTGTTCATCATGGACAATTGTGAGGAGCTGATTCCTGAGTATCTTGGGTTTGTCA AGGGTGTGGTTGACTCTGATGACTTGCCACTCAACATTTCCAGGGAGATGCTGCAGCAGAACAAGATCTTGAAGGTGATC AGGAAGAATCTTGTGAAGAAATGCATTGAGATGTTCAACGAGATCGCGGAGAATAAAGAGGATTACAACAAATTCTATGA TGCTTTCTCCAAGAACTTGAAGCTGGGTATCCATGAAGATAGTCAGAACAGGGCTAAATTGGCTGATTTGCTGAGATACT ATTCTACAAAGAGTGGAGATGAGTTGACTAGTCTCAAGGACTATGTTACCAGAATGAAGGAGGGGCAGAAGGACATTTAC TATATCACAGGAGAGAGCAAGAAGGCTGTGGAGAATTCACCATTCTTGGAGAGGCTGAAAAAGAAGGGGTATGAGGTGCT GTTCATGGTGGATGCAATTGATGAGTATGCTGTTGGGCAATTGAAAGAGTATGATGGGAAGAAGTTGGTTTCTGCTACTA AGGAGGGATTGAAATTGGATGATGAAAGCGAGGAAGAGAAGAAGAAGAAAGAGGAAAAGAAGAAGTCATTTGAGGATCTT TGCAGGACAATGAAGGACATCTTGGGAGACAGAGTTGAGAAAGTGGTTGTCTCTGACAGGATTGTGGATTCACCCTGCTG TTTGGTGACAGGGGAATACGGATGGACTGCGAACATGGAGAGGATCATGAAGGCTCAGGCGTTGAGGGATAGCAGCATGA GCAGCTACATGTCGAGCAAGAAGACCATGGAGATTAACCCGGATAATGGGATCATGGAGGAGCTGAGGAAGAGGGCTGAA GCTGATAAAAATGATAAATCAGTGAAGGATTTGGTGTTGCTTCTCTTTGAGACTGCACTCTTGACTTCTGGTTTCAGCCT TGATGATCCAAACACATTTGCTGCTAGAATTCACAGGATGTTGAAGCTTGGTCTTAGCATTGATGAGGAGGAGACTGGTG GAGATGAAGATATGCCTCCACTGGAGGAGGATGGTGCTGAGGAGAGTAAGATGGAGGAAGTTGACTAAGGATATATCATA TATCATGTAAGTATGGTGGCAGATGCATTGTGTCTGAAAGTCTGTCTACAAAGTTTAGTGTGTTATATTCTTTCTTGGTC TTTGGTTTATAGTTTTGTGTTGTCAAAATGTGTTATGATGAGCCTAAGCTGATTTTGTACTACTAGAACAAACATCAATG AAGCTGATCTGTGTATGTCTTCCATCCAAATTCCCTC
CDS sequence (LotjaGi5g1v0296600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGATGTTCAAATGTGTGACGCCGAGACCTTCGCATTCCAGGCTGAGATCAACCAACTCCTCAGCCTCATCATCAA CACCTTCTACAGCAACAAGGAGATTTTCCTCCGTGAACTCATCAGTAATGCCTCCGACGCTCTGGATAAAATTCGATTTG AGAGCCTCACCGATAAGACGAAGCTTGATGCTCAACCAGAGCTTTTCATTAGACTCGTTCCTGACAAGGCTAACAAGACT CTCTCCATCATTGACAGTGGCGTTGGCATGACCAAAGCAGATTTGGTGAACAATTTGGGAACCATTGCGAGGTCTGGGAC GAAGGAATTCATGGAAGCGTTACAGGCTGGGGCTGATGTTAGCATGATTGGCCAATTTGGCGTTGGTTTCTACTCTGCTT ACCTTGTTGCTGAGAAGGTCATTGTGACCACCAAGCACAATGACGATGAACAGTACATTTGGGAATCACAGGCTGGTGGA TCCTTCACTGTGATCAGGGATGTGAATGGTGAACAATTAGGAAGAGGAACTAAGATTACCTTGTTCCTCAAGGAGGATCA GTTGGAGTATTTGGAGGAGAGAAGGATTAAGGATCTTGTGAAGAAGCACTCTGAATTCATTAGCTATCCAATTTACCTCT GGACTGAGAAGACAACTGAGAAGGAGATCAGTGATGATGAGGAGGATGATGAGTCCAAGAAGGAGAAGGAAGGAGAAGTT GAGGATGTTGATGAAGAGAAGGAGAAGGATTCTAAGAAGAAGAAGATTAAGGAGGTTTCTCATGAGTGGGAACTCATCAA CAAGCAGAAACCAATCTGGCTGCGAAAGCCAGAGGAGATTACCAAGGATGAGTATGCTTCCTTCTACAAGAGCCTCACCA ATGACTGGGAAGACCACTTGGCTGTCAAGCATTTCTCAGTGGAGGGTCAGCTTGAGTTCAAGGCCATTCTATTTGTTCCC AAAAGGGCACCTTTTGATCTGTTTGACACAAGAAAGAAGATGAACAACATCAAGCTTTATGTGAGGAGGGTGTTCATCAT GGACAATTGTGAGGAGCTGATTCCTGAGTATCTTGGGTTTGTCAAGGGTGTGGTTGACTCTGATGACTTGCCACTCAACA TTTCCAGGGAGATGCTGCAGCAGAACAAGATCTTGAAGGTGATCAGGAAGAATCTTGTGAAGAAATGCATTGAGATGTTC AACGAGATCGCGGAGAATAAAGAGGATTACAACAAATTCTATGATGCTTTCTCCAAGAACTTGAAGCTGGGTATCCATGA AGATAGTCAGAACAGGGCTAAATTGGCTGATTTGCTGAGATACTATTCTACAAAGAGTGGAGATGAGTTGACTAGTCTCA AGGACTATGTTACCAGAATGAAGGAGGGGCAGAAGGACATTTACTATATCACAGGAGAGAGCAAGAAGGCTGTGGAGAAT TCACCATTCTTGGAGAGGCTGAAAAAGAAGGGGTATGAGGTGCTGTTCATGGTGGATGCAATTGATGAGTATGCTGTTGG GCAATTGAAAGAGTATGATGGGAAGAAGTTGGTTTCTGCTACTAAGGAGGGATTGAAATTGGATGATGAAAGCGAGGAAG AGAAGAAGAAGAAAGAGGAAAAGAAGAAGTCATTTGAGGATCTTTGCAGGACAATGAAGGACATCTTGGGAGACAGAGTT GAGAAAGTGGTTGTCTCTGACAGGATTGTGGATTCACCCTGCTGTTTGGTGACAGGGGAATACGGATGGACTGCGAACAT GGAGAGGATCATGAAGGCTCAGGCGTTGAGGGATAGCAGCATGAGCAGCTACATGTCGAGCAAGAAGACCATGGAGATTA ACCCGGATAATGGGATCATGGAGGAGCTGAGGAAGAGGGCTGAAGCTGATAAAAATGATAAATCAGTGAAGGATTTGGTG TTGCTTCTCTTTGAGACTGCACTCTTGACTTCTGGTTTCAGCCTTGATGATCCAAACACATTTGCTGCTAGAATTCACAG GATGTTGAAGCTTGGTCTTAGCATTGATGAGGAGGAGACTGGTGGAGATGAAGATATGCCTCCACTGGAGGAGGATGGTG CTGAGGAGAGTAAGATGGAGGAAGTTGACTAA
Protein sequence (LotjaGi5g1v0296600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADVQMCDAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKTKLDAQPELFIRLVPDKANKT LSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGG SFTVIRDVNGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEEDDESKKEKEGEV EDVDEEKEKDSKKKKIKEVSHEWELINKQKPIWLRKPEEITKDEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVP KRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMF NEIAENKEDYNKFYDAFSKNLKLGIHEDSQNRAKLADLLRYYSTKSGDELTSLKDYVTRMKEGQKDIYYITGESKKAVEN SPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDESEEEKKKKEEKKKSFEDLCRTMKDILGDRV EKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLV LLLFETALLTSGFSLDDPNTFAARIHRMLKLGLSIDEEETGGDEDMPPLEEDGAEESKMEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 248 | 248 | 0.0 | ||
PANTHER | 1 | 248 | 248 | 0.0 | – | |
PIRSF | 2 | 703 | 702 | 6.4E-262 | ||
Hamap | 7 | 670 | 664 | 27.334 | ||
PRINTS | 10 | 30 | 21 | 4.2E-84 | ||
SUPERFAMILY | 10 | 218 | 209 | 4.82E-75 | ||
Gene3D | 10 | 215 | 206 | 1.6E-106 | ||
CDD | 19 | 207 | 189 | 1.42481E-109 | – | |
ProSitePatterns | 30 | 39 | 10 | - | ||
PRINTS | 31 | 53 | 23 | 4.2E-84 | ||
SMART | 32 | 187 | 156 | 3.5E-9 | ||
Pfam | 32 | 186 | 155 | 2.4E-14 | ||
PRINTS | 80 | 97 | 18 | 4.2E-84 | ||
PRINTS | 98 | 115 | 18 | 4.2E-84 | ||
PRINTS | 123 | 145 | 23 | 4.2E-84 | ||
PRINTS | 175 | 192 | 18 | 4.2E-84 | ||
Pfam | 189 | 699 | 511 | 1.1E-237 | ||
PRINTS | 193 | 211 | 19 | 4.2E-84 | ||
Gene3D | 216 | 257 | 42 | 1.6E-106 | – | |
MobiDBLite | 220 | 251 | 32 | - | – | |
Coils | 233 | 253 | 21 | - | – | |
MobiDBLite | 236 | 251 | 16 | - | – | |
PANTHER | 250 | 703 | 454 | 0.0 | – | |
PANTHER | 250 | 703 | 454 | 0.0 | ||
Gene3D | 267 | 440 | 174 | 1.9E-82 | – | |
SUPERFAMILY | 268 | 523 | 256 | 9.1E-110 | ||
Gene3D | 441 | 528 | 88 | 5.7E-41 | – | |
Coils | 522 | 548 | 27 | - | – | |
MobiDBLite | 523 | 542 | 20 | - | – | |
Gene3D | 529 | 674 | 146 | 2.3E-64 | ||
SUPERFAMILY | 547 | 669 | 123 | 1.57E-38 | ||
MobiDBLite | 676 | 703 | 28 | - | – | |
MobiDBLite | 678 | 703 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi5g1v0296600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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