Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0296600 |
| Transcript ID | LotjaGi5g1v0296600.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein htpG family protein; TAIR: AT5G52640.1 heat shock-like protein; Swiss-Prot: sp|P51819|HSP83_IPONI Heat shock protein 83; TrEMBL-Plants: tr|A0A0V0IQG0|A0A0V0IQG0_SOLCH Putative heat shock protein 83-like; Found in the gene: LotjaGi5g1v0296600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61348484..61351028) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCAGATGTTCAAATGTGTGACGCCGAGACCTTCGCATTCCAGGCTGAGATCAACCAACTCCTCAGCCTCATCATCAA CACCTTCTACAGCAACAAGGAGATTTTCCTCCGTGAACTCATCAGTAATGCCTCCGACGTAAGCCTCTCCTCCTTCCACC ACCACCATTAACATTTTACTTTCCTTCGTTTCGTTAATCACTCAATTTGATTTGTGTGTTTGTTACATTTAGGCTCTGGA TAAAATTCGATTTGAGAGCCTCACCGATAAGACGAAGCTTGATGCTCAACCAGAGCTTTTCATTAGACTCGTTCCTGACA AGGCTAACAAGACTCTCTCCATCATTGACAGTGGCGTTGGCATGACCAAAGCAGGTACGTAGTTGTAATGTACCTCTTTA TCCGTTTTATTTAAATTGAGGTTGCGATCGCGGTTGCAGTTGTCGCGGAATTGTAGACAAATGCAGGTTGATGCGGCCGC AACTGGGTGTGACCCTGAAATATATTATGTTGCGGCCGCAATTTGAAACAATGGTTTTATTGTGAGAATTTGATTAAATG TGCTGTGCTATGCTTCTTATTGTGTGTGTTTATGTGGTGTGGTTTGGTTTCAGATTTGGTGAACAATTTGGGAACCATTG CGAGGTCTGGGACGAAGGAATTCATGGAAGCGTTACAGGCTGGGGCTGATGTTAGCATGATTGGCCAATTTGGCGTTGGT TTCTACTCTGCTTACCTTGTTGCTGAGAAGGTCATTGTGACCACCAAGCACAATGACGATGAACAGTACATTTGGGAATC ACAGGCTGGTGGATCCTTCACTGTGATCAGGGATGTGAATGGTGAACAATTAGGAAGAGGAACTAAGATTACCTTGTTCC TCAAGGAGGATCAGGTAAAGAAATTGAAGTTTTAACTACGATTGTTTTTTCTTTTTCTTTTGGGTGTTTGTTTTAGTCAA ATTGTTAATTGGTTGAGTCTTGTTTGTGCAACAGTTGGAGTATTTGGAGGAGAGAAGGATTAAGGATCTTGTGAAGAAGC ACTCTGAATTCATTAGCTATCCAATTTACCTCTGGACTGAGAAGACAACTGAGAAGGAGATCAGTGATGATGAGGAGGAT GATGAGTCCAAGAAGGAGAAGGAAGGAGAAGTTGAGGATGTTGATGAAGAGAAGGAGAAGGATTCTAAGAAGAAGAAGAT TAAGGAGGTTTCTCATGAGTGGGAACTCATCAACAAGCAGAAACCAATCTGGCTGCGAAAGCCAGAGGAGATTACCAAGG ATGAGTATGCTTCCTTCTACAAGAGCCTCACCAATGACTGGGAAGACCACTTGGCTGTCAAGCATTTCTCAGTGGAGGGT CAGCTTGAGTTCAAGGCCATTCTATTTGTTCCCAAAAGGGCACCTTTTGATCTGTTTGACACAAGAAAGAAGATGAACAA CATCAAGCTTTATGTGAGGAGGGTGTTCATCATGGACAATTGTGAGGAGCTGATTCCTGAGTATCTTGGGTTTGTCAAGG GTGTGGTTGACTCTGATGACTTGCCACTCAACATTTCCAGGGAGATGCTGCAGCAGAACAAGATCTTGAAGGTGATCAGG AAGAATCTTGTGAAGAAATGCATTGAGATGTTCAACGAGATCGCGGAGAATAAAGAGGATTACAACAAATTCTATGATGC TTTCTCCAAGAACTTGAAGCTGGGTATCCATGAAGATAGTCAGAACAGGGCTAAATTGGCTGATTTGCTGAGATACTATT CTACAAAGAGTGGAGATGAGTTGACTAGTCTCAAGGACTATGTTACCAGAATGAAGGAGGGGCAGAAGGACATTTACTAT ATCACAGGAGAGAGCAAGAAGGCTGTGGAGAATTCACCATTCTTGGAGAGGCTGAAAAAGAAGGGGTATGAGGTGCTGTT CATGGTGGATGCAATTGATGAGTATGCTGTTGGGCAATTGAAAGAGTATGATGGGAAGAAGTTGGTTTCTGCTACTAAGG AGGGATTGAAATTGGATGATGAAAGCGAGGAAGAGAAGAAGAAGAAAGAGGAAAAGAAGAAGTCATTTGAGGATCTTTGC AGGACAATGAAGGACATCTTGGGAGACAGAGTTGAGAAAGTGGTTGTCTCTGACAGGATTGTGGATTCACCCTGCTGTTT GGTGACAGGGGAATACGGATGGACTGCGAACATGGAGAGGATCATGAAGGCTCAGGCGTTGAGGGATAGCAGCATGAGCA GCTACATGTCGAGCAAGAAGACCATGGAGATTAACCCGGATAATGGGATCATGGAGGAGCTGAGGAAGAGGGCTGAAGCT GATAAAAATGATAAATCAGTGAAGGATTTGGTGTTGCTTCTCTTTGAGACTGCACTCTTGACTTCTGGTTTCAGCCTTGA TGATCCAAACACATTTGCTGCTAGAATTCACAGGATGTTGAAGCTTGGTCTTAGCATTGATGAGGAGGAGACTGGTGGAG ATGAAGATATGCCTCCACTGGAGGAGGATGGTGCTGAGGAGAGTAAGATGGAGGAAGTTGACTAA
CDS sequence (LotjaGi5g1v0296600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGATGTTCAAATGTGTGACGCCGAGACCTTCGCATTCCAGGCTGAGATCAACCAACTCCTCAGCCTCATCATCAA CACCTTCTACAGCAACAAGGAGATTTTCCTCCGTGAACTCATCAGTAATGCCTCCGACGCTCTGGATAAAATTCGATTTG AGAGCCTCACCGATAAGACGAAGCTTGATGCTCAACCAGAGCTTTTCATTAGACTCGTTCCTGACAAGGCTAACAAGACT CTCTCCATCATTGACAGTGGCGTTGGCATGACCAAAGCAGATTTGGTGAACAATTTGGGAACCATTGCGAGGTCTGGGAC GAAGGAATTCATGGAAGCGTTACAGGCTGGGGCTGATGTTAGCATGATTGGCCAATTTGGCGTTGGTTTCTACTCTGCTT ACCTTGTTGCTGAGAAGGTCATTGTGACCACCAAGCACAATGACGATGAACAGTACATTTGGGAATCACAGGCTGGTGGA TCCTTCACTGTGATCAGGGATGTGAATGGTGAACAATTAGGAAGAGGAACTAAGATTACCTTGTTCCTCAAGGAGGATCA GTTGGAGTATTTGGAGGAGAGAAGGATTAAGGATCTTGTGAAGAAGCACTCTGAATTCATTAGCTATCCAATTTACCTCT GGACTGAGAAGACAACTGAGAAGGAGATCAGTGATGATGAGGAGGATGATGAGTCCAAGAAGGAGAAGGAAGGAGAAGTT GAGGATGTTGATGAAGAGAAGGAGAAGGATTCTAAGAAGAAGAAGATTAAGGAGGTTTCTCATGAGTGGGAACTCATCAA CAAGCAGAAACCAATCTGGCTGCGAAAGCCAGAGGAGATTACCAAGGATGAGTATGCTTCCTTCTACAAGAGCCTCACCA ATGACTGGGAAGACCACTTGGCTGTCAAGCATTTCTCAGTGGAGGGTCAGCTTGAGTTCAAGGCCATTCTATTTGTTCCC AAAAGGGCACCTTTTGATCTGTTTGACACAAGAAAGAAGATGAACAACATCAAGCTTTATGTGAGGAGGGTGTTCATCAT GGACAATTGTGAGGAGCTGATTCCTGAGTATCTTGGGTTTGTCAAGGGTGTGGTTGACTCTGATGACTTGCCACTCAACA TTTCCAGGGAGATGCTGCAGCAGAACAAGATCTTGAAGGTGATCAGGAAGAATCTTGTGAAGAAATGCATTGAGATGTTC AACGAGATCGCGGAGAATAAAGAGGATTACAACAAATTCTATGATGCTTTCTCCAAGAACTTGAAGCTGGGTATCCATGA AGATAGTCAGAACAGGGCTAAATTGGCTGATTTGCTGAGATACTATTCTACAAAGAGTGGAGATGAGTTGACTAGTCTCA AGGACTATGTTACCAGAATGAAGGAGGGGCAGAAGGACATTTACTATATCACAGGAGAGAGCAAGAAGGCTGTGGAGAAT TCACCATTCTTGGAGAGGCTGAAAAAGAAGGGGTATGAGGTGCTGTTCATGGTGGATGCAATTGATGAGTATGCTGTTGG GCAATTGAAAGAGTATGATGGGAAGAAGTTGGTTTCTGCTACTAAGGAGGGATTGAAATTGGATGATGAAAGCGAGGAAG AGAAGAAGAAGAAAGAGGAAAAGAAGAAGTCATTTGAGGATCTTTGCAGGACAATGAAGGACATCTTGGGAATACGGATG GACTGCGAACATGGAGAGGATCATGAAGGCTCAGGCGTTGAGGGATAG
Protein sequence (LotjaGi5g1v0296600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADVQMCDAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKTKLDAQPELFIRLVPDKANKT LSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGG SFTVIRDVNGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEEDDESKKEKEGEV EDVDEEKEKDSKKKKIKEVSHEWELINKQKPIWLRKPEEITKDEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVP KRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMF NEIAENKEDYNKFYDAFSKNLKLGIHEDSQNRAKLADLLRYYSTKSGDELTSLKDYVTRMKEGQKDIYYITGESKKAVEN SPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDESEEEKKKKEEKKKSFEDLCRTMKDILGIRM DCEHGEDHEGSGVEG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 248 | 248 | 0.0 | ||
| PANTHER | 1 | 248 | 248 | 0.0 | – | |
| PIRSF | 2 | 561 | 560 | 1.8E-222 | ||
| Hamap | 7 | 574 | 568 | 22.266 | ||
| PRINTS | 10 | 30 | 21 | 1.4E-84 | ||
| SUPERFAMILY | 10 | 218 | 209 | 3.16E-75 | ||
| Gene3D | 10 | 215 | 206 | 1.0E-106 | ||
| CDD | 19 | 207 | 189 | 7.43347E-111 | – | |
| ProSitePatterns | 30 | 39 | 10 | - | ||
| PRINTS | 31 | 53 | 23 | 1.4E-84 | ||
| Pfam | 32 | 186 | 155 | 1.7E-14 | ||
| SMART | 32 | 187 | 156 | 3.5E-9 | ||
| PRINTS | 80 | 97 | 18 | 1.4E-84 | ||
| PRINTS | 98 | 115 | 18 | 1.4E-84 | ||
| PRINTS | 123 | 145 | 23 | 1.4E-84 | ||
| PRINTS | 175 | 192 | 18 | 1.4E-84 | ||
| Pfam | 189 | 557 | 369 | 3.5E-177 | ||
| PRINTS | 193 | 211 | 19 | 1.4E-84 | ||
| Gene3D | 216 | 257 | 42 | 1.0E-106 | – | |
| MobiDBLite | 220 | 251 | 32 | - | – | |
| Coils | 233 | 253 | 21 | - | – | |
| MobiDBLite | 236 | 251 | 16 | - | – | |
| PANTHER | 250 | 559 | 310 | 0.0 | – | |
| PANTHER | 250 | 559 | 310 | 0.0 | ||
| Gene3D | 267 | 440 | 174 | 1.3E-82 | – | |
| SUPERFAMILY | 268 | 523 | 256 | 5.61E-110 | ||
| Gene3D | 441 | 533 | 93 | 4.2E-41 | – | |
| Coils | 522 | 548 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi5g1v0296600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…