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LotjaGi5g1v0330600.1

Overview

Field Value
Gene ID LotjaGi5g1v0330600
Transcript ID LotjaGi5g1v0330600.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description ABC transporter G family member; TAIR: AT2G01320.1 ABC-2 type transporter family protein; Swiss-Prot: sp|Q9ZU35|AB7G_ARATH ABC transporter G family member 7; TrEMBL-Plants: tr|I1LEM3|I1LEM3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0330600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:64767889..64774844) extracted from Lotus japonicus Gifu genome v1.2.

ATGGTGCCTTTTGGCGGGAAAAAGGTGACCCAAATTGTCACCGGCTTCGGCGGCAGTGGCCTCGGCCAGGTCGTAATCGC CGTCGCCGTCTCCTTCCTCGTCCGCGTCTTCTCCGTCCCCGGCCCTGCCCTCTCGCCGGAAAACGACGATGCACCCAACG ACGATTCCCACGACGGTGAAACTTCACCCTCCGGGAAGGTCACGCCGGTCACTATCCGATGGAGTAACATCAACTGCTCC CTTTCTGATAAATCCTCCAAGTCCGTGAGTTCCTACTCTCTCTCTCTCTCTAAGTCCTATTAGAACTGGATTTTCATGTT AAGCAAACTGTTAATTACTTCGTTACCTGCAAATCTTGGTTAAATTTCTGTGATAATCCTGTTGCATTATGGTGATTTTG TTATTCTTCTGGTGAGGTTTTGATTTGGTGATGATTGTGAAGCTGATGTTAACTGAATAGGTGAGGTTTTTGCTTAAGAA TGTGAGTGGAGAAGCGAAGCCTGGAAGATTATTAGCCATAATGGGGCCTTCAGGTTCAGGGAAGACAACGTTGCTGAATG TTCTCGCGGGTCAGCTGGCCGCATCGCCGCGGCTGCATTTGTCTGGTCTTTTGGAGTTCAATGGAAAGCCTGGTTCCAAG AATGCTTACAAGTATGTGTTTGGTTTGTTAGGAATTTGTACTTGCTGATATTTCTTTTGAGTTGCTATGGTTTTTTGTGT ATGCGGATCAATGAAAGAAAATGCTTGTTTTGTTGCTGTAGGTTTGCTTATGTGAGACAGGAGGATCTCTTTTTCTCGCA GCTCACTGTGCGGGAAACATTGTCTCTTGCTACTGAACTTCAGCTTCCCAATATATCTTCTGCGGAAGAGAGAGATGAAT ACGTGAACAATCTCCTTTTCAAATTAGGCTTGGTGAGTTTCCATATTTTTGGAAGTTATGCTTATGTGATGCATGCTTGC CCACCATCTTTACATGTTTCAAAAATAGTAATCACCGTTAGAATCAGAAGTTACTTGTGTGTCTTATGTAATTATTTTTA GTTTTCCTCTTTGAAACGGGTTATTCTCGTATTATGGTTCAATGTTACTGATATTACTCCCTTTGGCATCTGTATGATTT TTGTTTAAAAGGTCAGCTGTGCTGATACCAATGTTGGTGATTCAAAAGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGC TTATCCATGGCATGTGAACTGCTCGCAAGCCCATCGGTTATATTTGCTGATGAACCCACAACAGGTAAGCATGCACTTTG GAATTTGCTTTGCAGTGGATTTGAAGTTTGCTTACTTTGTAGGATGATGTAACAATAAAAGAACTTTGCGCTGAAGTGTA TTCCTGCCTTCCTGGTTTACATTCTAAAATAAGAAAATAGCAATGTCTGAAATTTCAATATGCATGTTTAGCTTCAGATG CTTTCTGACAATTACCACTGATATTAGCGGTATAGGAATTTCAATTTCAACATGCTCCCATGGTGGATATCTGTTAGGAA ACCAAAAAAGAATGATCTTATTTCTTGACTGAAAATGAACAGAACAAGGAGAAAGATATACCTAAGGGTTTCCCCTTCAC AAGGGGTTTCCTCTTTCTCAACTGAGCTTTGCTTGCTCTATCAATACAATTCCCTTAATGATCCCCCACCCTTGCTTCCC CCTATTTATATATCTTACTAATCCCTCCTGACTCTATGTCCTAAATTTCTAATTGCCTATATTAACTAACCCCTTACTGT CCCCTTTATTCTTTCAAGCGACTACCATTCTTTCTAAACAGTATCCTCTAATCACTCCGGGGCTGCTAAGATTTCGGGTT GCTTCTTAAAAAGGAAAAGAAGTCTACTTTGTTGCCTTGCTGCTTGTTCAGCATTGGCTTTATCATATTTAAACCCTGTC CTATAGAATTGTACTCATGGTTTAACCTGTTTTGCTGGGCTTCAAGCTAATGAAAGTTCTCGAATCTTGTAATTCTATCT TGGTTTGAGGGATATGATATGCATCTGATGACCTGGGTATGTCTACAATTTTACACAGATGTTATCTTGGTTGCTCACAC CATTTTAACCATTTATCAGAAAATAAGTTCAATTTATCATTTAAGGTTCAGATAGTCTGAATTACTTATCAAGTTAATGG AGTATCTGAATAGTAATAACTTCATTTTAAAGTAGGCTAAGTGCAAGAAACCCCATTCAACTTACAAGTGAATTTCAGAA AACTATCTTGTGGTTACAGCTCGTCTTCTCCAACTTATGACTGTTCATATCAACTCCTTACATGGCATCTTTCGTACATG CACAAGGGGTTAGCTTCACATTAAGTTTTCACCCTTTGGTGGGTTTAGGTTGTTGAGTTTTTACGTGTTGAACCACAAGG GATTTTTATGATGCTGACCTATAGTTAGAGGGAGGTTGTTCCCATTTTGGCTTATAAAATATATAGCGGAATAATGTGCA TTGTCCTGTCTGCCTTTGATGATTTTTCTGTTAAGAACTCTTGTTTTCATTTTAATTTTGAGGTTATAATGTGTGAATGG AATTTCCCAGCTAGTAGCTGCTACCAGATGCGGTTATTTTGTACATACAATTATAACATCTTCCTATCTCCCCCTCCTCC CACTTACTTTGTCATAAAGTTACTTTCAGGACTTGATGCGTTCCAGGCTGAGAAAGTCATGGAAACTCTCCAACAACTTG CACAAGATGGTCATACTGTAATTTGCTCTATACATCAGCCGAGAGGTTCAGTGTATAGTAAATTCGATGACATTGTCTTG CTAACTGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGACGAACCATTGACATACTTCTCAAAATTCGGGTAATTGGC TACCTTATTTATGTCACGCCATCATACATCTTTCACATTGGGAATTCTCTCAGTATTTTATTATTTAAGAAACTGAGGCT GAGTTAACTTATTTATTAATTGATTCATTTTATTGTAACTAATTATTTATAATAACATGATAACACAGACTTTTCTGTCT ATTATTTGAGAATCTTACTTTGAAACACTATACTTTTAGAAAAGCCAATGAATCCAGATTATAAAAGCTTGTCAGAATTT CAAATTTAATCTTTACATTTAATTTATCATTTTATCAACTCTTTAATTAGTTGATATTGATAGCAACATTGTGGTAAGTG ATAATCCTTGGAGTAACATCATGCATCTATAGTTATTCCACTTATTTACTTTTTAATCAAACTGTATTACGAATGAGGCT TTTATGCCACATGTCAAAGAATTTTTATAGTAAAGTCATAATTTGAATAGATGCACTTGTAACTCTCTTCACTGTGTTCA AAACTTCATATTTGACTACTACCCAATTTTTACGCAGTTGATAGATATTTCTGTTTTGGCTTCAATTTGAGATGGCAATT GATAAAAAAAATTATGAATTAGTCTTGAATTTTTCATCATTGTTTTTTTTTTCAAGTTAAAGGTCGATATGTATTCATAT TTCATCCGATCAACCAAAAAAGCCTAGTCTCTTTCTTTGTATGGTTTTTTTGTTGTTAAAATCTCAACAGATGTAAGAAA TAATGCATTGAAATGATAATCTTGTTTAACTTATATCTATCACTTTTGGACCAGTAGTTCTGAACAATTGGTTGATGATT GTCGATGAAACAGGTACCACTGCCCGGATCATGTAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATAGACTACAGT TCTGCTGACAGTGTCTATTCATCTCGAAAAAGGATTGATGGGCTTGTTGAGTCATTCTCTCAAAGACTATCTACAGTAAT ATATGCAACACCAATTACTATAGATGATATCTCAAAAAGTAGAAAGAAAATCAGCCAGAGGACTGTAGCAAAGAAGAAAG GTGGTTGGTGGAAGCAATTTTGGTTGCTCCTTAAACGAGCATGGATGCAGGTCTGGCCTTTTAATTTCATCTTTTTTTTG TACTCGTCAAATGGCAGGACCTAGATAAATTGCATGATAGGACCTGTATTTAGTTTTCCTTCTTTCCCATGAACACATTT GATGTGCCTTACTTAAAAGACTTCGGAACTTGATCAAGTCATCTGGCAAGACATAATCACAAAATTTGCATTATTTCTTG CTTTTATGTTGTGAAGTTAAATTATTTATTTTCTCAATTGTGAATTACACGGCAGAGAGAAGTATATATAATACGCGTCA TTAATATAAGATCCTTAGTTTCTCTAATTACGGTAATTATAAAATAATACACAACACATAATCAGCCCATACTTGTCCTA TTTTCATTTTTCTAACAAACCATATGACCTATATATTTTCTAGTTTTGGAGCATAAAAAAGGATAATTTATTTCTTGCAC ACAGGGTAAGGAGAATGGAATTTATTTCTCATCTATTTGACTCATAGTTCTCTGGATGACTAGGCTTCACGTGATGCTCC TACCAACAAAGTTCGGGCAAGGATGTCAATTGCATCAGCAATTATTTTTGGGTCAGTTTTCTGGAGGATGGGAAAATCTC AGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTTGCGATGTTCTTGATTCCTGCATGCTTGTTTTTCATATTGGC CTGCTGCTAACATGCATTGGAGAACCACTTTGATTTTTGGCAAGACACATGATTTGCTTATTAACCTAAAGTAAAACTTA ATATTATGATAACCACCAACTAATTGGGCTTGGCTAGTGTTATATTAAATCTAGTACACTTGACTTGACTACATGAGCTC CATCTTTTATTTAATTATGCTGACGAATGCTTTGAAGTTTAAACTCAAATCTTGTTCTGTTATTAAAATGAAAGTCTCAC TTGGCTAAGTTTGCTTTCTTGAATTACATGGACTGTACTCAGGTTGCTGCAATTAACACAGCTATGGCCGCTCTCACAAA GACTACTGGTGTGTTTCCGAAGGAACGGGCAATTGTTGATAGAGAACGTGCTAAAGGCTCCTATTCCTTGGGTCCTTATC TGTTTTCAAAACTGTTGGCCGAGGCTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTGCTGTTCTGTACCCTATGGCG CGCCTTCATCCTACATTGATGAGGTCAGTTTCCTATCTTGGCCCCTAGGAGCTTTAGTTTCAGTCATATTTCAATTTCTC TTCATTTTATTTTGCTCTTTTTTGTCAGTAGATCAAAATCTTATGTAATGCTTCATACAATGAAAATGGCCATGAAATGT GCATGATTTTCTATTTTCCTCATAATCCATAAATGCCTTTATTTTATTTTCAAAGATTATTTATATTGGCAAATCCCAAT GGCCACAGGGGTATACATATCCATAGCCATAGGTGATGAATCATGAATGAATGTTCTGTAGAAAAAGAAATAATAAACTA AATATTTTTTGATTTTCTCTTGATCTGTTTTGCCTCCATTCTAAAAACAAGAAAAAGTGAAATGGAAAGTGGGAAAAAGT TCATTCCCCATGTTATTATCTTGTCACTCCTTACTTTCTACCTTTGCTCTTGAGATCTTCTATTTAATTCTTTCAATCTC ATATTATAACTAATTAGTTTTAAATTGTAGATTTGGAAAATTCTGTGGAATTGTCACTATGGAATCTTTTGCGGCATCTG CGATGGGTCTTACTGTTGGAGCTATGGTTCCAACTACTGAAGCAGCTATGGCAGTAGGCCCCTCTCTTATGACTGTTTTT ATTGTTTTTGGAGGCTACTATGTTAATCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAGTGTTTCTCTGATTAG ATGGTAAGCACAATTCTGATTTGAGTAAGAGGTGTTAACTTCAACTGTATAGGTCAAACAGAAGTTTAGTTGAGCTAAAC ATCCATGTAAAGTTTGATATTTGTTTCTCTTGCTCTGATACTAATGACTACCATATTGATTTATGCATTCTTTCAGGGCC TTTCAGGGACTTTGCATTAATGAATTTAGAGGTCTTCAATTTGATCATCAGCATTCATTTGATGTTCAAACAGGAGAACA GGTGAGGGGAGAGAGACAAATATTCTACCTCAATTTAGAACTATTGTCAAGTTCAATAGAATTGAATAAAAACAACATAT CTTATGACTAGTGCACTCCAAAACCAAAGGGAAATTTTATCTTTTCTTTTTCTAATATAAAAACACTTACAAAGGGAAGA ACCAAGCCAGAAAACATGATTGCTTTTGGGTATGATAAGGATGTATAAATGAGGGAGGAAAAAACAACTAACCCTATTAG CTGGCCTGATTGAATAGACTAATCACCATCAGTTTTTACCGAAATGGTTTTGTTCCTTGAGCAGTAATGGTTTCTAACTC CTTCATGTAAGCGCTAAATTTAGAACATTAACATGGGCTAATAATTTGCCATTGTTCAACCATTTCTTTAAGTTGAAATT GTGATACTGTCATAGTTTATTGGATATCTATTTAAGTAGAAGAGATAGTAATTAAACATAATACCTATCTGGTTTTCTAC TGTCACATACGTGGAAAAAGTAGTAGTTTATCTGCATGTGGTTTCTTGAATGCTGATGTGTTTCCCTTTCTTATCCCCTT CCCTCATTCACAGGCACTCGAGCGAATTTCCTTTGGAAAAAGTAGGATTATGGATACGGTGGTAGCACAAAATAGAATAC TGTTGTTTTGGTATTGCACCACCTACCTTCTCCTGGAGAAAAATAAGCCCAAATACCAGCAACTTGAAACACCCCCTCTT GACCATGAAAGACCACATTTAGAACTGGAGGAGTTCAATTCTGAACAACCTGACCAGACACCTGAAGCTCCACCCGTTAA CCAAGTTGATTCCAATCAGCCCCTTGAGTCACCTGATGTAGATCCTGTTGGCCCTTTTATGCTAGAAGGTTTGTAA 

CDS sequence (LotjaGi5g1v0330600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTGCCTTTTGGCGGGAAAAAGGTGACCCAAATTGTCACCGGCTTCGGCGGCAGTGGCCTCGGCCAGGTCGTAATCGC CGTCGCCGTCTCCTTCCTCGTCCGCGTCTTCTCCGTCCCCGGCCCTGCCCTCTCGCCGGAAAACGACGATGCACCCAACG ACGATTCCCACGACGGTGAAACTTCACCCTCCGGGAAGGTCACGCCGGTCACTATCCGATGGAGTAACATCAACTGCTCC CTTTCTGATAAATCCTCCAAGTCCGTGAGGTTTTTGCTTAAGAATGTGAGTGGAGAAGCGAAGCCTGGAAGATTATTAGC CATAATGGGGCCTTCAGGTTCAGGGAAGACAACGTTGCTGAATGTTCTCGCGGGTCAGCTGGCCGCATCGCCGCGGCTGC ATTTGTCTGGTCTTTTGGAGTTCAATGGAAAGCCTGGTTCCAAGAATGCTTACAAGTTTGCTTATGTGAGACAGGAGGAT CTCTTTTTCTCGCAGCTCACTGTGCGGGAAACATTGTCTCTTGCTACTGAACTTCAGCTTCCCAATATATCTTCTGCGGA AGAGAGAGATGAATACGTGAACAATCTCCTTTTCAAATTAGGCTTGGTCAGCTGTGCTGATACCAATGTTGGTGATTCAA AAGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGCTTATCCATGGCATGTGAACTGCTCGCAAGCCCATCGGTTATATTT GCTGATGAACCCACAACAGGACTTGATGCGTTCCAGGCTGAGAAAGTCATGGAAACTCTCCAACAACTTGCACAAGATGG TCATACTGTAATTTGCTCTATACATCAGCCGAGAGGTTCAGTGTATAGTAAATTCGATGACATTGTCTTGCTAACTGAGG GTTCACTTGTTTATGCTGGTCCTGCTCGTGACGAACCATTGACATACTTCTCAAAATTCGGGTACCACTGCCCGGATCAT GTAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATAGACTACAGTTCTGCTGACAGTGTCTATTCATCTCGAAAAAG GATTGATGGGCTTGTTGAGTCATTCTCTCAAAGACTATCTACAGTAATATATGCAACACCAATTACTATAGATGATATCT CAAAAAGTAGAAAGAAAATCAGCCAGAGGACTGTAGCAAAGAAGAAAGGTGGTTGGTGGAAGCAATTTTGGTTGCTCCTT AAACGAGCATGGATGCAGGCTTCACGTGATGCTCCTACCAACAAAGTTCGGGCAAGGATGTCAATTGCATCAGCAATTAT TTTTGGGTCAGTTTTCTGGAGGATGGGAAAATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAA TTAACACAGCTATGGCCGCTCTCACAAAGACTACTGGTGTGTTTCCGAAGGAACGGGCAATTGTTGATAGAGAACGTGCT AAAGGCTCCTATTCCTTGGGTCCTTATCTGTTTTCAAAACTGTTGGCCGAGGCTCCCATTGGAGCAGCATTTCCATTAAT GTTTGGTGCTGTTCTGTACCCTATGGCGCGCCTTCATCCTACATTGATGAGATTTGGAAAATTCTGTGGAATTGTCACTA TGGAATCTTTTGCGGCATCTGCGATGGGTCTTACTGTTGGAGCTATGGTTCCAACTACTGAAGCAGCTATGGCAGTAGGC CCCTCTCTTATGACTGTTTTTATTGTTTTTGGAGGCTACTATGTTAATCCTGAGAATACCCCAATCATCTTCCGCTGGAT TCCTAGTGTTTCTCTGATTAGATGGGCCTTTCAGGGACTTTGCATTAATGAATTTAGAGGTCTTCAATTTGATCATCAGC ATTCATTTGATGTTCAAACAGGAGAACAGGCACTCGAGCGAATTTCCTTTGGAAAAAGTAGGATTATGGATACGGTGGTA GCACAAAATAGAATACTGTTGTTTTGGTATTGCACCACCTACCTTCTCCTGGAGAAAAATAAGCCCAAATACCAGCAACT TGAAACACCCCCTCTTGACCATGAAAGACCACATTTAGAACTGGAGGAGTTCAATTCTGAACAACCTGACCAGACACCTG AAGCTCCACCCGTTAACCAAGTTGATTCCAATCAGCCCCTTGAGTCACCTGATGTAGATCCTGTTGGCCCTTTTATGCTA GAAGGTTTGTAA 

Protein sequence (LotjaGi5g1v0330600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVPFGGKKVTQIVTGFGGSGLGQVVIAVAVSFLVRVFSVPGPALSPENDDAPNDDSHDGETSPSGKVTPVTIRWSNINCS LSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEFNGKPGSKNAYKFAYVRQED LFFSQLTVRETLSLATELQLPNISSAEERDEYVNNLLFKLGLVSCADTNVGDSKVRGISGGEKKRLSMACELLASPSVIF ADEPTTGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYSKFDDIVLLTEGSLVYAGPARDEPLTYFSKFGYHCPDH VNPAEFLADLISIDYSSADSVYSSRKRIDGLVESFSQRLSTVIYATPITIDDISKSRKKISQRTVAKKKGGWWKQFWLLL KRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAALTKTTGVFPKERAIVDRERA KGSYSLGPYLFSKLLAEAPIGAAFPLMFGAVLYPMARLHPTLMRFGKFCGIVTMESFAASAMGLTVGAMVPTTEAAMAVG PSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCINEFRGLQFDHQHSFDVQTGEQALERISFGKSRIMDTVV AQNRILLFWYCTTYLLLEKNKPKYQQLETPPLDHERPHLELEEFNSEQPDQTPEAPPVNQVDSNQPLESPDVDPVGPFML EGL 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 11 11 -
SignalP_GRAM_POSITIVE 1 45 45 -
Phobius 12 34 23 -
TMHMM 12 34 23 -
Phobius 35 417 383 -
MobiDBLite 43 68 26 -
CDD 69 300 232 1.04943E-88
ProSiteProfiles 72 318 247 18.621
SUPERFAMILY 73 304 232 1.69E-42
Gene3D 82 308 227 2.3E-52
Pfam 93 245 153 1.4E-23
SMART 102 295 194 8.8E-13
PANTHER 117 665 549 7.7E-197
PANTHER 117 665 549 7.7E-197
ProSitePatterns 218 232 15 -
Pfam 395 605 211 2.8E-43
Phobius 418 436 19 -
Phobius 437 447 11 -
Phobius 448 469 22 -
Phobius 470 488 19 -
Phobius 489 513 25 -
TMHMM 494 516 23 -
Phobius 514 524 11 -
Phobius 525 549 25 -
TMHMM 528 550 23 -
Phobius 550 554 5 -
Phobius 555 575 21 -
TMHMM 555 577 23 -
Phobius 576 723 148 -
MobiDBLite 667 723 57 -
MobiDBLite 668 685 18 -
MobiDBLite 686 707 22 -
Coils 720 723 4 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Molecular function ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0330600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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