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LotjaGi5g1v0341300.1

Overview

Field Value
Gene ID LotjaGi5g1v0341300
Transcript ID LotjaGi5g1v0341300.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Serine/threonine protein phosphatase 2A regulatory subunit A; TAIR: AT3G25800.1 protein phosphatase 2A subunit A2; Swiss-Prot: sp|Q38950|2AAB_ARATH Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform; TrEMBL-Plants: tr|A0A072W1U6|A0A072W1U6_MEDTR Serine/threonine protein phosphatase 2A regulatory subunit A; Found in the gene: LotjaGi5g1v0341300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:65862419..65870375) extracted from Lotus japonicus Gifu genome v1.2.

TGTTTAGAGGCTTTGTCCTCGATTTTGGCGGAAGCTATTGGTTTCCATTAGACGTTATCTTTGGCTTATAATTTCTATTT CTTACAAGTATGCTTTAAGACCAATTGTCTTCGGCTGCTAGAAACTTGGCAAGTTGGCCTGAGCCACTTCTCAAGCGAGG ATCAAAGCTAGCTATTTCCCTATGTGGAGACAGTTTTGGAAAATTACATCAGCGAGGGGCTAAAGTCAGCACTCACTCAA AGTTCAGGGACCAAAGGCTTTAGTTAACTCAAAACTTAAAATCTAGAAAACACGGACCAATGCTATTTCCGGAGACATAT AGCTCCGTTCCTCCGTCGTCTTCCTCCTCCGCCTCCTCCTCCTCCTCCGGTGTTAGGGTTTTCAGTGTCCAGTCCATGCA TTTCACCTCCCAATAATACGTCTCTAAAATCCACCTTCAACTGCATCCAACGATTCACCACAAGAAGATTGCAACACCTC CATAGTTTCGTTTCTTCAGCTCGCTAAATCGAAGCAAATCATCACTTTCGCGTTACAGGTTCACGATACTTTGCTCCTTG CTACCTGGATTTTACGCGCTAGCTTGTATTTGATCTTCTAACAGTGTGATTTATTTGCTGATTCTTCCAGAGGCAGCAAT GGCTGATGAACCACTATATCCAATAGCGGTGCTTATAGACGAGCTCAAAAACGATGATATCCAGCTGCGTTTGAATTCAA TTCGCAGGCTATCGACGATTGCGCGTGCTCTCGGGGAGGAGCGAACGCGTAAAGAGTTGATTCCGTTTTTGATTGAGAAT AATGATGATGATGATGAGGTGCTTCTTGCCATGGCAGAGGAGTTGGGAGTATTTATTCCTTATGTTGGGGGAGTGGAGCA TGCCAGTGTGTTGCTTCCACCTCTTGAGACACTTGGCAGTGTTGAGGAAACTTGTGTGAGGGATAAAGCTGTGGAGTCAC TTTGTAGAATTGGATCTCAGATGAGGGAGAGTGATTTGGTTGAATTTTTCATACCCTTGGTGAAGGTTAGTGAACATTTT TCCTAATCAGTGTAAATGTTTATATTATGACTTTAACTGGAATCTATCATGAATGCTACTTAAGAATTTTCCTTTTCATG GTTTTGGTGCCTAGTGTGTTTTGATTATCACATTGATTTTACTTTCCTGGAATTTGACATTTTCCTATTATGTGAACTAC TTGATACAATGATACTTATGAATATATAGATTGGTTAATGGACCTGGGTTTGACTTAAATGATGTTTAATATGTTCCTTA TTTCACTCAACAAATATTTTGTTCCAGTATCTAGCATTTTTTTTGTTGCTAAGTGATAATACAAGTCCTAGTCTTTGAAG CATGTACAAAGCTATGGACACACCAACAAGCACATTGTTGCTACATAGATATGCATGCATATGTGTGTCTATATATGTAG TATAGATGCATGTCAGTATGTGTGTGTCCGAAGAGGAGTGTATTATTTTCGAGTAAGAAAGGAATTAATCTTAACCATCT ATGCATGGTTGTATGGTCAAGATTAGCTCCTCTCTCACTTAATACGGCCCATATATATACATGCTATGGGGCATAAGGAG CGAATGGAGGAAGAACTGACATTTCCAAATGAAGTGTGTAGGAGACATTTCTTAACATTTCGACTTTTTTACTATAATCT AAGTTGGCCTTCCCTAAGTTATTAAAAAAGAAAATTAAACTTTTCGTTAAGAGCTGTATCCTTCAAATCTCAAGCTTTGT TTGAATATTTGTGAAGTGTCAAAGTTGCGTTTCCATGCTGTCTTGGCTAAGTTTCATAGCCAATAAAAGATAGTTTTTTA ATAGGACACCTGATCAGGAGTGTCTAACATGTAGTCAGTATCGAAAACATGTCCAACACTTCGCCATGTCAAGAAGGAAA AGTATTTATTCTTCGTAAGATCAGATCGTGCTTGTTTATCGTTTATGATGTTCTATATATATCCTTCCAGTTCTCATCTG CTGTATTGGTTAAACATTCTGACATGATATCATTTCTGTGTTCAGAGATTGGCAGCAGGTGAGTGGTTTACTGCCCGAGT CTCTGCATGTGGACTATTCCACATTGCATACCCAAGTGCTCCAGAAAACTCGAAGACAGAGCTGAGATCAATATACAACC AATTATGTCAGGACGACATGCCTATGGTTAGAAGATCTGCTGCAGCAAACCTTGGGAAATTTGCTGCAACTGTTGAATAT GCTCATTTGAAGGCAGACATTATGTCAATTTTCGAGGAACTTACGCAGGATGGTAATGATATAAACATTTCATGTTCTAT TTAGATGGAAGTGTTTGTCATTTGTCTAGTGCACTGGGTCGTTTGATTGTTTTCTAGAATCTATTATCTGTTCCTGAATG TACTTTGCTTTGTCAATATGTGATTGTATTTTTTTTCACTTCGATCAGATCAAGATTCTGTCAGATTGTTGGCTGTGGAG GGCTGTGCTGCTCTTGGCAAGCTGTTGGAGCCACAAGATTGTGTTTCCCATATACTCCCGGTTATTGTCAGTTTCTCCCA GGTACATTTAGGGGTGGATAAAACTTCTTAGAATATAGATATGAATCAATTGATTTTGTCAGTTTAGGTATTTATGGGAA AAGAAATCAATTAATATATGTAGACTGTAGTCATTAAGCTTTGTTGCACGGATACGGTACAGGTTACAAGTACGAGATAC TAGATTTTCGAAAATCTAAAGTACGGGTGTGCTGATATATGGATACACACAACAAATTACATAAAAGGTAAAAATATAAT CATAATAACATCTAACGTAAATGAGATTACATATTTAATAAGCCAACTAAACATCTCATATTAAAAAAACTCAAATACAT TGGTGTAAAAACTAACAATTAATGAAGTACATAAGAGAAGTGGAGATTCGTGCATGAACCGAGAAAGGAAATGTGAATTT GGTGACTTCTCCCCGTCGGCCATTGCAGGCAAGCATCGACCAAGAATGAACATGCGAATGAGTTGATGAGGCGGGTTTTC ATTCTTGCATATATTCCACGCTCCAGATGTCTAGCCCTAGGCATGAGAGGGGTGTTGAGAAGTCCCAATTGACTATAGAT ATGGCCAAGATAGCCCTTATATATGGGAAGACAATCCTCACCTCTTGAGCTAGCTTTTGGGGTAGAGTTAGGTCTCCAAA ATTCTAATAATTATTTTCCTTTTTTATTTAACCGTTCTTTTTCCTAATGTATATTTAAAAAATCCAAGGAGGTAAAGTAA ATCATAATTTAATTCCCTCCCGGTGGAAAAATCTCTTTTTCCCTTTGTTTTTATTATATTCCTTTTCCTTCCCAATGGTC CAACATACCTTGGTTAATTCATGTCCCTGCATTTACATATCTGTAAAATGTTATGTGCACCATACCAAATATTTTTTTAG TTTTATTTATTTATTTGATCTGATTTAAGTTGATCTTGGATAGGATAAGTCTTGGCGTGTGCGTTACATGGTTGCAAATC AGTTATACGAGCTCTGTGAAGCTGTAGGCCCTGAACCTACCAGGTATTATTTTTTTGGCTAAACATCATTAGTGCTGCAT ATCTTATTATGCTTCCATCACTGTGCTATGCTCTGTGAATATATTGTATCCTCATATTATGGCTTATAAGCTGAGTTCAC TACTTTGGATTTTGAATGTTCATGATAATAGCTTAATGCTAAAACTTGTGATTCCCATATTGATTTTTCTGTTGCATTTA CTAAGGTCCAACTGTCAAGCTCAAGCTATGTATCTATCTTTCTTGAGATTTTAATTTCTTGTTACTATTGTTGTGAAGAA CGGAATTGGTCCCTGCCTATGTGCGGTTGCTTCGAGATAATGAAGCTGAAGTACGCATAGCAGCTGCCGGAAAAGTAACT AAGTTTTGCCGGATTTTAAGTCCAGATCTTGCAATTCAGCATATTCTTCCTTGTGTGAAGGTGTGAAGAAATTCTGATTC ATGTTTAATATTACCATTTATACATAGACCCTCTTTTGTTTTGGTTGTGCAATTCTGTACTGTAAATTTATACTTACTAG TTTAAAAACTCCGGAACAACTTTTGCAGGAATTGTCATCAGATTCTTCTCAGCATGTCCGCTCTGCTTTGGCTTCTGTAA TAATGGGAATGGCTCCAGTGTTAGGAAAGGTATAAGTATCAAATAGCAGTCTCTGCTGTCATTCTGCTCTTGACAGTAAT GTTCAGTATCTCTATTTGTGAAGGTGTAATCTATTGCATTGAATTTTGTCTAGGTGCATAATCATGAACTAAAACTGAAT TCTGGACAAGTGTTTTAGGTGGTAAAGTATGTCTCCCAACTTCCAGAAATGCCACCTGATTGTTTTGTGTAGGCCATTGG AATATGAAAAACTAAGTGCTAAAATATGTCCCCTGTGAGTGGGAAGGGCATATGTCATACTGCAGGCTTGGATTATCTAT GCAGTAATTAACTAGATTGACCTTTGAATCCTCCCCTTCCTTCATCCTCCCAGCCTGCAATGAAGGAAAAGATGTCACTG CCATTGCCAAATCTTGGTTTGATGCGGTTTCCAGGCATTATAAATTGGCAAAGACATTCTTTATTTGGTCCACACATCAT ACCATTTCAAAAGATTACTTTGTTTCTTAATTTTGCTAGTGATCTGTATATGGTTATGCTTGGCTGCTTGTGTGTTTACT TTATGGTAACTGACTCCGTCATTTTGCTGTATTAAATTTACTGGATTGGGATATTCGAGTTCTAGAACTAATCACGAAGC AGCATTTTTTAGCCCTTTTATAGTTTCCAATAGATCACAACCTTTCTTCTTTTTCCAATAAATATTACTCCTCTAAGCCT TTTTCCCCTGCACTGATTGTGATTGTAGTAACTTTTATAGCAAATTTGATTCTTAGTTCTACCTTATCTTCAATGCAGGA AGCAACAATTGAGCAGCTTCTTCCTATTTTCCTTTGCCTTTTGAAGGATGAATTTCCTGATGTGCGCCTAAACATCATCA GCAAGCTTGATCAAGTGAATCAGGTTGTTACAGTTTTTCTAGTTTTTTGCTTTAGACTCTTGAAAGCCTTTTTCTTTTCT TCTACTGATGCCACAAAACTAGCATACAATACCTATTCTTTAATTTATGGCCTTTCGTGAGCACAACCATATACTCACAA AAAGCAAAGCAACTGCAAGCTTTTCAAATTGATGTTGATCAAGATTTTCTTACAGGTTATCGGAATCGATCTGTTATCTC AATCTTTATTACCAGCAATTGTTGAGCTTGCTGAGGATAGGCATTGGAGGGTCCGGCTTGCAATTATAGAGTATATACCC TTATTGGCAAGTCAATTGGGGGTTGGTTTTTTCGATGACAAGCTTGGCAATCTCTGCATGCAGTGGTTACAAGATAAGGT TTGTGCTCTCCTTTTCCCTGCTAGTGTGGATAAATTTTGGGACTTAATTTTTCATGACTATTTTTGTTTTTGTAGGTTCA TTCAATTCGTGAAGCAGCTGCCAACAACATAAAACGTCTTGCTGAAGAATTTGGTCCTGATTGGGCTATGCAGAACATAA TTCCACAGGTTCATCTATTGGCTTAATTTATTATTGCTGCATGGTACATCAACATATGTTCCATTACTCATTTACGTATG TGTTTTGTACATGTCATCTGCTGGAAACCCATTCCTATGACTTGGATTTGTGTGTGCCTTTTCTTTTTTCTTTTTTATTT CTAAAATTTTTGTGCTCAGCCTTTCTCTCCCTTGGCTGCAGCCCCTGTTAAGTAATCCCTTTAGCGAGTTTCACTGAAAT ATTAGCTACCAATAGTATCTAGTTTCTTTGAAATATCTGCTTTCTATACGCTAATACTTTTCTGATATTGTCCTAAATAC AACTTCACAAGTATCACTATTGAATGTATGGGGACAGGTTTTGGATATGATTAACAATCCACACTATTTGTATCGGATGA CCATTCTTCGAGCTATCTCCCTGCTTGCTCCTGTAATGGGATCTGAAATCACTTGTTCAAAATTATTGCCAGTTGTTGTT TCAGCATCAAAGGACAGGTAATTTATTTTACTTTTTAAAAGGTTGCTATATGTCATAGGGTAAGGGTCGATATGATCATT TAAGTTTCTAACTGCTGCCTGTTGCCTCTATAGAGTGCCCAACATAAAGTTCAATGTGGCAAAAGTATTAGAGTCCATCT TCCCCATTGTTGATCAGTCTGTAAGTATTATACTCCATCCTCTGTTTGTTTCTCTTTCTTTCTGTCCACTCTTATCCTGT GAACGTCATTGCTATTCAGGTGGTGGAGAAGACAATCCGCCCTTGTCTAGTTGAGCTCAGTGAGGATCCTGATGTTGACG TGCGATTCTTTTCCAACCAAGCGCTCCAGGCAATTGATCATGTCATGATGTCTACCTAGGCCGGAATGTCTTAACATCCA TTTAGGTTGAAGACTTCGCTGGGCTGCTAATATTTCCAGCTAAGCTATCATATATAGTACTGCTTAGTTTTGTTAATACT GCTTAGTTATGTTTAGTGCTCTTCAGTTATCTTAAATGGTTTTTGTGAGTAACTAGCCATTGATGATTGATGTGATTTAG CTCCCCTTATATGCCATGTTCTATATATTCATATCTTTTTCTTGATTGTATTATGCATAAATTATTTTTGTCCCTTGTCC CAGGCGATGAATTACTTCTTTCAAATATTAAGTGCCATAATATCCCGAGCCCTTCCATATGAATTTCAATTCATGGAACT TTCGTTCATTGCTAATTTATGGGATATATATTATGTTAGTTTATTTGTACTGTTGTTTAACATTTTAGGCTATGTTACAA AAAACTTAGGTTAAGCAAAGCAAAACTTACAATAACCAGGGGAGTCTTTATTCTTCAATAAATGGACTTTTAATCCCAAT ATATCAGATTATGTTTGTTTTTTCGTCTGCACCATTTCAAAAGTTCGTTCAAGGCTTTCCAATGCAATGAAGGGAGATGC AAGCCTACTTTTATATTGGAATAAAAGTTCGTCCTCGTTGTGCCCAAGGGGTATATAAACGCACTCATTAACCTTAGTTT CACATTATACTTAGACTTTTGTACCTAAACAATTTTTAGTTGTTTGGATGTTTTCTTTCATAATTGGTTCTAGCTCTAAA ATTAATCATGGGATGTGGCTATAAATTTTGAACATAATTAATTGTGAGATTTCACGATATCATGTAACAACAATCACTTT TTTTCATAAATATATTTATTCAAATACGAATTACTTTACTTTCTCTCACTTTTACCTTAGTTAATTTCCCAATTTTATCC ATAATCAAATTTGACAATATTGATTTTTTTTGTTTAACGACAACATTGATCTAAATACACAAAATTATTGTAATAACCGA CACCTTTTACAAGAGTGCACTTTTTTTTTTCTTTGTCAGAGAAGTAATGATGTTCTACGGTTCAACTATTTGGAATATGT TTTGGATTGTTTATAATTTATTTTTACTATAAAATAGTTTTGTCTTTATTGGAAGCCCTGATATCCCACTGTGGTACTGT TCCACTGCCCCCCCTGCTGCAAGCTTCTGCAAAGTGCTGTATTTTTGTATTTTAACGGATGATGAGACTGATATGATGCC AGTGTTGAATAGGTCATAGCATACAATTAAGAGTATATTTAAACCTATGTTAACTTGACCTTTTTTAATATAGCTGATAT GTCCTATCAAATAATTTTCCATGCATGGCGTGAACCCATCCAAAATTTACTATTATTTACTTATTAACTGTAGGTTTCTA ATAAGTGACCCTTAAAATATAGATGTTTAAAATGTTCTTTTTTAGTAAATGACTTCTGACACGATCAGAAGAGAAAAGAC TTGTTTGGAAAGATGTGTAGCAAACTACCAATGCCGG 

CDS sequence (LotjaGi5g1v0341300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTGATGAACCACTATATCCAATAGCGGTGCTTATAGACGAGCTCAAAAACGATGATATCCAGCTGCGTTTGAATTC AATTCGCAGGCTATCGACGATTGCGCGTGCTCTCGGGGAGGAGCGAACGCGTAAAGAGTTGATTCCGTTTTTGATTGAGA ATAATGATGATGATGATGAGGTGCTTCTTGCCATGGCAGAGGAGTTGGGAGTATTTATTCCTTATGTTGGGGGAGTGGAG CATGCCAGTGTGTTGCTTCCACCTCTTGAGACACTTGGCAGTGTTGAGGAAACTTGTGTGAGGGATAAAGCTGTGGAGTC ACTTTGTAGAATTGGATCTCAGATGAGGGAGAGTGATTTGGTTGAATTTTTCATACCCTTGGTGAAGAGATTGGCAGCAG GTGAGTGGTTTACTGCCCGAGTCTCTGCATGTGGACTATTCCACATTGCATACCCAAGTGCTCCAGAAAACTCGAAGACA GAGCTGAGATCAATATACAACCAATTATGTCAGGACGACATGCCTATGGTTAGAAGATCTGCTGCAGCAAACCTTGGGAA ATTTGCTGCAACTGTTGAATATGCTCATTTGAAGGCAGACATTATGTCAATTTTCGAGGAACTTACGCAGGATGATCAAG ATTCTGTCAGATTGTTGGCTGTGGAGGGCTGTGCTGCTCTTGGCAAGCTGTTGGAGCCACAAGATTGTGTTTCCCATATA CTCCCGGTTATTGTCAGTTTCTCCCAGGATAAGTCTTGGCGTGTGCGTTACATGGTTGCAAATCAGTTATACGAGCTCTG TGAAGCTGTAGGCCCTGAACCTACCAGAACGGAATTGGTCCCTGCCTATGTGCGGTTGCTTCGAGATAATGAAGCTGAAG TACGCATAGCAGCTGCCGGAAAAGTAACTAAGTTTTGCCGGATTTTAAGTCCAGATCTTGCAATTCAGCATATTCTTCCT TGTGTGAAGGAATTGTCATCAGATTCTTCTCAGCATGTCCGCTCTGCTTTGGCTTCTGTAATAATGGGAATGGCTCCAGT GTTAGGAAAGGAAGCAACAATTGAGCAGCTTCTTCCTATTTTCCTTTGCCTTTTGAAGGATGAATTTCCTGATGTGCGCC TAAACATCATCAGCAAGCTTGATCAAGTGAATCAGGTTATCGGAATCGATCTGTTATCTCAATCTTTATTACCAGCAATT GTTGAGCTTGCTGAGGATAGGCATTGGAGGGTCCGGCTTGCAATTATAGAGTATATACCCTTATTGGCAAGTCAATTGGG GGTTGGTTTTTTCGATGACAAGCTTGGCAATCTCTGCATGCAGTGGTTACAAGATAAGGTTCATTCAATTCGTGAAGCAG CTGCCAACAACATAAAACGTCTTGCTGAAGAATTTGGTCCTGATTGGGCTATGCAGAACATAATTCCACAGGTTTTGGAT ATGATTAACAATCCACACTATTTGTATCGGATGACCATTCTTCGAGCTATCTCCCTGCTTGCTCCTGTAATGGGATCTGA AATCACTTGTTCAAAATTATTGCCAGTTGTTGTTTCAGCATCAAAGGACAGAGTGCCCAACATAAAGTTCAATGTGGCAA AAGTATTAGAGTCCATCTTCCCCATTGTTGATCAGTCTGTGGTGGAGAAGACAATCCGCCCTTGTCTAGTTGAGCTCAGT GAGGATCCTGATGTTGACGTGCGATTCTTTTCCAACCAAGCGCTCCAGGCAATTGATCATGTCATGATGTCTACCTAG 

Protein sequence (LotjaGi5g1v0341300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MADEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLIENNDDDDEVLLAMAEELGVFIPYVGGVE HASVLLPPLETLGSVEETCVRDKAVESLCRIGSQMRESDLVEFFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPENSKT ELRSIYNQLCQDDMPMVRRSAAANLGKFAATVEYAHLKADIMSIFEELTQDDQDSVRLLAVEGCAALGKLLEPQDCVSHI LPVIVSFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCRILSPDLAIQHILP CVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPIFLCLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAI VELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGNLCMQWLQDKVHSIREAAANNIKRLAEEFGPDWAMQNIIPQVLD MINNPHYLYRMTILRAISLLAPVMGSEITCSKLLPVVVSASKDRVPNIKFNVAKVLESIFPIVDQSVVEKTIRPCLVELS EDPDVDVRFFSNQALQAIDHVMMST 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D 1 581 581 5.9E-252
PANTHER 3 584 582 0.0
PANTHER 3 584 582 0.0
SUPERFAMILY 6 578 573 6.37E-106
ProSiteProfiles 8 46 39 9.815
ProSiteProfiles 162 200 39 8.747
ProSiteProfiles 201 239 39 9.983
ProSiteProfiles 240 278 39 13.552
Pfam 240 268 29 2.3E-4
ProSiteProfiles 279 317 39 12.85
ProSiteProfiles 318 356 39 12.288
ProSiteProfiles 357 395 39 12.035
Pfam 364 458 95 4.4E-10
ProSiteProfiles 396 434 39 11.669
ProSiteProfiles 474 512 39 10.011
ProSiteProfiles 513 551 39 10.911
ProSiteProfiles 552 585 34 10.124

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0341300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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