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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0341300 |
| Transcript ID | LotjaGi5g1v0341300.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 2A regulatory subunit A; TAIR: AT3G25800.1 protein phosphatase 2A subunit A2; Swiss-Prot: sp|Q38950|2AAB_ARATH Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform; TrEMBL-Plants: tr|A0A072W1U6|A0A072W1U6_MEDTR Serine/threonine protein phosphatase 2A regulatory subunit A; Found in the gene: LotjaGi5g1v0341300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:65863048..65868877) extracted from Lotus japonicus Gifu genome v1.2.
GAGGCAGCAATGGCTGATGAACCACTATATCCAATAGCGGTGCTTATAGACGAGCTCAAAAACGATGATATCCAGCTGCG TTTGAATTCAATTCGCAGGCTATCGACGATTGCGCGTGCTCTCGGGGAGGAGCGAACGCGTAAAGAGTTGATTCCGTTTT TGATTGAGAATAATGATGATGATGATGAGGTGCTTCTTGCCATGGCAGAGGAGTTGGGAGTATTTATTCCTTATGTTGGG GGAGTGGAGCATGCCAGTGTGTTGCTTCCACCTCTTGAGACACTTGGCAGTGTTGAGGAAACTTGTGTGAGGGATAAAGC TGTGGAGTCACTTTGTAGAATTGGATCTCAGATGAGGGAGAGTGATTTGGTTGAATTTTTCATACCCTTGGTGAAGGTTA GTGAACATTTTTCCTAATCAGTGTAAATGTTTATATTATGACTTTAACTGGAATCTATCATGAATGCTACTTAAGAATTT TCCTTTTCATGGTTTTGGTGCCTAGTGTGTTTTGATTATCACATTGATTTTACTTTCCTGGAATTTGACATTTTCCTATT ATGTGAACTACTTGATACAATGATACTTATGAATATATAGATTGGTTAATGGACCTGGGTTTGACTTAAATGATGTTTAA TATGTTCCTTATTTCACTCAACAAATATTTTGTTCCAGTATCTAGCATTTTTTTTGTTGCTAAGTGATAATACAAGTCCT AGTCTTTGAAGCATGTACAAAGCTATGGACACACCAACAAGCACATTGTTGCTACATAGATATGCATGCATATGTGTGTC TATATATGTAGTATAGATGCATGTCAGTATGTGTGTGTCCGAAGAGGAGTGTATTATTTTCGAGTAAGAAAGGAATTAAT CTTAACCATCTATGCATGGTTGTATGGTCAAGATTAGCTCCTCTCTCACTTAATACGGCCCATATATATACATGCTATGG GGCATAAGGAGCGAATGGAGGAAGAACTGACATTTCCAAATGAAGTGTGTAGGAGACATTTCTTAACATTTCGACTTTTT TACTATAATCTAAGTTGGCCTTCCCTAAGTTATTAAAAAAGAAAATTAAACTTTTCGTTAAGAGCTGTATCCTTCAAATC TCAAGCTTTGTTTGAATATTTGTGAAGTGTCAAAGTTGCGTTTCCATGCTGTCTTGGCTAAGTTTCATAGCCAATAAAAG ATAGTTTTTTAATAGGACACCTGATCAGGAGTGTCTAACATGTAGTCAGTATCGAAAACATGTCCAACACTTCGCCATGT CAAGAAGGAAAAGTATTTATTCTTCGTAAGATCAGATCGTGCTTGTTTATCGTTTATGATGTTCTATATATATCCTTCCA GTTCTCATCTGCTGTATTGGTTAAACATTCTGACATGATATCATTTCTGTGTTCAGAGATTGGCAGCAGGTGAGTGGTTT ACTGCCCGAGTCTCTGCATGTGGACTATTCCACATTGCATACCCAAGTGCTCCAGAAAACTCGAAGACAGAGCTGAGATC AATATACAACCAATTATGTCAGGACGACATGCCTATGGTTAGAAGATCTGCTGCAGCAAACCTTGGGAAATTTGCTGCAA CTGTTGAATATGCTCATTTGAAGGCAGACATTATGTCAATTTTCGAGGAACTTACGCAGGATGGTAATGATATAAACATT TCATGTTCTATTTAGATGGAAGTGTTTGTCATTTGTCTAGTGCACTGGGTCGTTTGATTGTTTTCTAGAATCTATTATCT GTTCCTGAATGTACTTTGCTTTGTCAATATGTGATTGTATTTTTTTTCACTTCGATCAGATCAAGATTCTGTCAGATTGT TGGCTGTGGAGGGCTGTGCTGCTCTTGGCAAGCTGTTGGAGCCACAAGATTGTGTTTCCCATATACTCCCGGTTATTGTC AGTTTCTCCCAGGTACATTTAGGGGTGGATAAAACTTCTTAGAATATAGATATGAATCAATTGATTTTGTCAGTTTAGGT ATTTATGGGAAAAGAAATCAATTAATATATGTAGACTGTAGTCATTAAGCTTTGTTGCACGGATACGGTACAGGTTACAA GTACGAGATACTAGATTTTCGAAAATCTAAAGTACGGGTGTGCTGATATATGGATACACACAACAAATTACATAAAAGGT AAAAATATAATCATAATAACATCTAACGTAAATGAGATTACATATTTAATAAGCCAACTAAACATCTCATATTAAAAAAA CTCAAATACATTGGTGTAAAAACTAACAATTAATGAAGTACATAAGAGAAGTGGAGATTCGTGCATGAACCGAGAAAGGA AATGTGAATTTGGTGACTTCTCCCCGTCGGCCATTGCAGGCAAGCATCGACCAAGAATGAACATGCGAATGAGTTGATGA GGCGGGTTTTCATTCTTGCATATATTCCACGCTCCAGATGTCTAGCCCTAGGCATGAGAGGGGTGTTGAGAAGTCCCAAT TGACTATAGATATGGCCAAGATAGCCCTTATATATGGGAAGACAATCCTCACCTCTTGAGCTAGCTTTTGGGGTAGAGTT AGGTCTCCAAAATTCTAATAATTATTTTCCTTTTTTATTTAACCGTTCTTTTTCCTAATGTATATTTAAAAAATCCAAGG AGGTAAAGTAAATCATAATTTAATTCCCTCCCGGTGGAAAAATCTCTTTTTCCCTTTGTTTTTATTATATTCCTTTTCCT TCCCAATGGTCCAACATACCTTGGTTAATTCATGTCCCTGCATTTACATATCTGTAAAATGTTATGTGCACCATACCAAA TATTTTTTTAGTTTTATTTATTTATTTGATCTGATTTAAGTTGATCTTGGATAGGATAAGTCTTGGCGTGTGCGTTACAT GGTTGCAAATCAGTTATACGAGCTCTGTGAAGCTGTAGGCCCTGAACCTACCAGGTATTATTTTTTTGGCTAAACATCAT TAGTGCTGCATATCTTATTATGCTTCCATCACTGTGCTATGCTCTGTGAATATATTGTATCCTCATATTATGGCTTATAA GCTGAGTTCACTACTTTGGATTTTGAATGTTCATGATAATAGCTTAATGCTAAAACTTGTGATTCCCATATTGATTTTTC TGTTGCATTTACTAAGGTCCAACTGTCAAGCTCAAGCTATGTATCTATCTTTCTTGAGATTTTAATTTCTTGTTACTATT GTTGTGAAGAACGGAATTGGTCCCTGCCTATGTGCGGTTGCTTCGAGATAATGAAGCTGAAGTACGCATAGCAGCTGCCG GAAAAGTAACTAAGTTTTGCCGGATTTTAAGTCCAGATCTTGCAATTCAGCATATTCTTCCTTGTGTGAAGGTGTGAAGA AATTCTGATTCATGTTTAATATTACCATTTATACATAGACCCTCTTTTGTTTTGGTTGTGCAATTCTGTACTGTAAATTT ATACTTACTAGTTTAAAAACTCCGGAACAACTTTTGCAGGAATTGTCATCAGATTCTTCTCAGCATGTCCGCTCTGCTTT GGCTTCTGTAATAATGGGAATGGCTCCAGTGTTAGGAAAGGTATAAGTATCAAATAGCAGTCTCTGCTGTCATTCTGCTC TTGACAGTAATGTTCAGTATCTCTATTTGTGAAGGTGTAATCTATTGCATTGAATTTTGTCTAGGTGCATAATCATGAAC TAAAACTGAATTCTGGACAAGTGTTTTAGGTGGTAAAGTATGTCTCCCAACTTCCAGAAATGCCACCTGATTGTTTTGTG TAGGCCATTGGAATATGAAAAACTAAGTGCTAAAATATGTCCCCTGTGAGTGGGAAGGGCATATGTCATACTGCAGGCTT GGATTATCTATGCAGTAATTAACTAGATTGACCTTTGAATCCTCCCCTTCCTTCATCCTCCCAGCCTGCAATGAAGGAAA AGATGTCACTGCCATTGCCAAATCTTGGTTTGATGCGGTTTCCAGGCATTATAAATTGGCAAAGACATTCTTTATTTGGT CCACACATCATACCATTTCAAAAGATTACTTTGTTTCTTAATTTTGCTAGTGATCTGTATATGGTTATGCTTGGCTGCTT GTGTGTTTACTTTATGGTAACTGACTCCGTCATTTTGCTGTATTAAATTTACTGGATTGGGATATTCGAGTTCTAGAACT AATCACGAAGCAGCATTTTTTAGCCCTTTTATAGTTTCCAATAGATCACAACCTTTCTTCTTTTTCCAATAAATATTACT CCTCTAAGCCTTTTTCCCCTGCACTGATTGTGATTGTAGTAACTTTTATAGCAAATTTGATTCTTAGTTCTACCTTATCT TCAATGCAGGAAGCAACAATTGAGCAGCTTCTTCCTATTTTCCTTTGCCTTTTGAAGGATGAATTTCCTGATGTGCGCCT AAACATCATCAGCAAGCTTGATCAAGTGAATCAGGTTGTTACAGTTTTTCTAGTTTTTTGCTTTAGACTCTTGAAAGCCT TTTTCTTTTCTTCTACTGATGCCACAAAACTAGCATACAATACCTATTCTTTAATTTATGGCCTTTCGTGAGCACAACCA TATACTCACAAAAAGCAAAGCAACTGCAAGCTTTTCAAATTGATGTTGATCAAGATTTTCTTACAGGTTATCGGAATCGA TCTGTTATCTCAATCTTTATTACCAGCAATTGTTGAGCTTGCTGAGGATAGGCATTGGAGGGTCCGGCTTGCAATTATAG AGTATATACCCTTATTGGCAAGTCAATTGGGGGTTGGTTTTTTCGATGACAAGCTTGGCAATCTCTGCATGCAGTGGTTA CAAGATAAGGTTTGTGCTCTCCTTTTCCCTGCTAGTGTGGATAAATTTTGGGACTTAATTTTTCATGACTATTTTTGTTT TTGTAGGTTCATTCAATTCGTGAAGCAGCTGCCAACAACATAAAACGTCTTGCTGAAGAATTTGGTCCTGATTGGGCTAT GCAGAACATAATTCCACAGGTTCATCTATTGGCTTAATTTATTATTGCTGCATGGTACATCAACATATGTTCCATTACTC ATTTACGTATGTGTTTTGTACATGTCATCTGCTGGAAACCCATTCCTATGACTTGGATTTGTGTGTGCCTTTTCTTTTTT CTTTTTTATTTCTAAAATTTTTGTGCTCAGCCTTTCTCTCCCTTGGCTGCAGCCCCTGTTAAGTAATCCCTTTAGCGAGT TTCACTGAAATATTAGCTACCAATAGTATCTAGTTTCTTTGAAATATCTGCTTTCTATACGCTAATACTTTTCTGATATT GTCCTAAATACAACTTCACAAGTATCACTATTGAATGTATGGGGACAGGTTTTGGATATGATTAACAATCCACACTATTT GTATCGGATGACCATTCTTCGAGCTATCTCCCTGCTTGCTCCTGTAATGGGATCTGAAATCACTTGTTCAAAATTATTGC CAGTTGTTGTTTCAGCATCAAAGGACAGGTAATTTATTTTACTTTTTAAAAGGTTGCTATATGTCATAGGGTAAGGGTCG ATATGATCATTTAAGTTTCTAACTGCTGCCTGTTGCCTCTATAGAGTGCCCAACATAAAGTTCAATGTGGCAAAAGTATT AGAGTCCATCTTCCCCATTGTTGATCAGTCTGTAAGTATTATACTCCATCCTCTGTTTGTTTCTCTTTCTTTCTGTCCAC TCTTATCCTGTGAACGTCATTGCTATTCAGGTGGTGGAGAAGACAATCCGCCCTTGTCTAGTTGAGCTCAGTGAGGATCC TGATGTTGACGTGCGATTCTTTTCCAACCAAGCGCTCCAGGCAATTGATCATGTCATGATGTCTACCTAG
CDS sequence (LotjaGi5g1v0341300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGATGAACCACTATATCCAATAGCGGTGCTTATAGACGAGCTCAAAAACGATGATATCCAGCTGCGTTTGAATTC AATTCGCAGGCTATCGACGATTGCGCGTGCTCTCGGGGAGGAGCGAACGCGTAAAGAGTTGATTCCGTTTTTGATTGAGA ATAATGATGATGATGATGAGGTGCTTCTTGCCATGGCAGAGGAGTTGGGAGTATTTATTCCTTATGTTGGGGGAGTGGAG CATGCCAGTGTGTTGCTTCCACCTCTTGAGACACTTGGCAGTGTTGAGGAAACTTGTGTGAGGGATAAAGCTGTGGAGTC ACTTTGTAGAATTGGATCTCAGATGAGGGAGAGTGATTTGGTTGAATTTTTCATACCCTTGGTGAAGAGATTGGCAGCAG GTGAGTGGTTTACTGCCCGAGTCTCTGCATGTGGACTATTCCACATTGCATACCCAAGTGCTCCAGAAAACTCGAAGACA GAGCTGAGATCAATATACAACCAATTATGTCAGGACGACATGCCTATGGTTAGAAGATCTGCTGCAGCAAACCTTGGGAA ATTTGCTGCAACTGTTGAATATGCTCATTTGAAGGCAGACATTATGTCAATTTTCGAGGAACTTACGCAGGATGATCAAG ATTCTGTCAGATTGTTGGCTGTGGAGGGCTGTGCTGCTCTTGGCAAGCTGTTGGAGCCACAAGATTGTGTTTCCCATATA CTCCCGGTTATTGTCAGTTTCTCCCAGGATAAGTCTTGGCGTGTGCGTTACATGGTTGCAAATCAGTTATACGAGCTCTG TGAAGCTGTAGGCCCTGAACCTACCAGAACGGAATTGGTCCCTGCCTATGTGCGGTTGCTTCGAGATAATGAAGCTGAAG TACGCATAGCAGCTGCCGGAAAAGTAACTAAGTTTTGCCGGATTTTAAGTCCAGATCTTGCAATTCAGCATATTCTTCCT TGTGTGAAGGAATTGTCATCAGATTCTTCTCAGCATGTCCGCTCTGCTTTGGCTTCTGTAATAATGGGAATGGCTCCAGT GTTAGGAAAGGAAGCAACAATTGAGCAGCTTCTTCCTATTTTCCTTTGCCTTTTGAAGGATGAATTTCCTGATGTGCGCC TAAACATCATCAGCAAGCTTGATCAAGTGAATCAGGTTATCGGAATCGATCTGTTATCTCAATCTTTATTACCAGCAATT GTTGAGCTTGCTGAGGATAGGCATTGGAGGGTCCGGCTTGCAATTATAGAGTATATACCCTTATTGGCAAGTCAATTGGG GGTTGGTTTTTTCGATGACAAGCTTGGCAATCTCTGCATGCAGTGGTTACAAGATAAGGTTCATTCAATTCGTGAAGCAG CTGCCAACAACATAAAACGTCTTGCTGAAGAATTTGGTCCTGATTGGGCTATGCAGAACATAATTCCACAGGTTTTGGAT ATGATTAACAATCCACACTATTTGTATCGGATGACCATTCTTCGAGCTATCTCCCTGCTTGCTCCTGTAATGGGATCTGA AATCACTTGTTCAAAATTATTGCCAGTTGTTGTTTCAGCATCAAAGGACAGAGTGCCCAACATAAAGTTCAATGTGGCAA AAGTATTAGAGTCCATCTTCCCCATTGTTGATCAGTCTGTGGTGGAGAAGACAATCCGCCCTTGTCTAGTTGAGCTCAGT GAGGATCCTGATGTTGACGTGCGATTCTTTTCCAACCAAGCGCTCCAGGCAATTGATCATGTCATGATGTCTACCTAG
Protein sequence (LotjaGi5g1v0341300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLIENNDDDDEVLLAMAEELGVFIPYVGGVE HASVLLPPLETLGSVEETCVRDKAVESLCRIGSQMRESDLVEFFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPENSKT ELRSIYNQLCQDDMPMVRRSAAANLGKFAATVEYAHLKADIMSIFEELTQDDQDSVRLLAVEGCAALGKLLEPQDCVSHI LPVIVSFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCRILSPDLAIQHILP CVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPIFLCLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAI VELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGNLCMQWLQDKVHSIREAAANNIKRLAEEFGPDWAMQNIIPQVLD MINNPHYLYRMTILRAISLLAPVMGSEITCSKLLPVVVSASKDRVPNIKFNVAKVLESIFPIVDQSVVEKTIRPCLVELS EDPDVDVRFFSNQALQAIDHVMMST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 581 | 581 | 5.9E-252 | ||
| PANTHER | 3 | 584 | 582 | 0.0 | – | |
| PANTHER | 3 | 584 | 582 | 0.0 | – | |
| SUPERFAMILY | 6 | 578 | 573 | 6.37E-106 | ||
| ProSiteProfiles | 8 | 46 | 39 | 9.815 | ||
| ProSiteProfiles | 162 | 200 | 39 | 8.747 | ||
| ProSiteProfiles | 201 | 239 | 39 | 9.983 | ||
| ProSiteProfiles | 240 | 278 | 39 | 13.552 | ||
| Pfam | 240 | 268 | 29 | 2.3E-4 | ||
| ProSiteProfiles | 279 | 317 | 39 | 12.85 | ||
| ProSiteProfiles | 318 | 356 | 39 | 12.288 | ||
| ProSiteProfiles | 357 | 395 | 39 | 12.035 | ||
| Pfam | 364 | 458 | 95 | 4.4E-10 | – | |
| ProSiteProfiles | 396 | 434 | 39 | 11.669 | ||
| ProSiteProfiles | 474 | 512 | 39 | 10.011 | ||
| ProSiteProfiles | 513 | 551 | 39 | 10.911 | ||
| ProSiteProfiles | 552 | 585 | 34 | 10.124 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0341300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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