Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0358900 |
| Transcript ID | LotjaGi5g1v0358900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin-repeat protein; TAIR: AT3G12360.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9C7A2|ITN1_ARATH Ankyrin repeat-containing protein ITN1; TrEMBL-Plants: tr|A3KBV8|A3KBV8_LOTJA IGN1; Found in the gene: LotjaGi5g1v0358900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67337519..67342196) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTGTTTGAGTTACCTCAAGCCTTTTGTTTTTGAACCTACCTCATAAATTATTTTGTTCATAAATAAAGTCCTACATT TTTGAAGAAAAAGCAATAGACTGTTGATGCATTTTGTTTTTTTTTTTCCAAATTTCATCATAATTAAAAAAGAAAAAAAA ACCAAAATGTATTTGTCCATTTTTCAATCCCCTGTTTCCAATGACTTTCCTCTTTCCCTTCCCTTTCCACTCATCTTCTC TTGTTTTATCATCATCATCATCTTCTTCAATCTTCTTCCTTCACTTCCACTCTCTGCTAAATGCTTTCCACACATAACAA CACTTAGCACACCTCTCTGCTTTGTTTCCTCCATCACTCACATGGCTTCCAACTTCAACCAACCAGGTTTTTTTTTTTCT CTATTCATCCATCCAAATTTTCAATAAAGTTTTACTTTTTTGATGACCCTTTAATCTGATTGTTGTGTAGGAGGAGCTCT AGGTCAAAGGGACATAGAAAAGGAAAAGGCTGCTATGACTCCACCACAGACTCCACTTTCTGAGATTTCGCCGTCGCCGT CTCCGTCGTCATCCACGGCGCCGGCGCTGGTGCTGTCGAACTCCGGGAAGCGGATCGACCAGGCCGGGAAGAAGAAGTAC GTGAAGCAGGTGACAGGGCGCCACAACGACACGGAGCTGCACCTGGCGGCGCAGAGGGGCGATGTTGGTGCGGTCAGGCA GATCCTTCTCGACATCGATTCTCAGATAATGGGGACTCATGGCGGCGGCGGCGGCGGCGACGGCGATGTTGTTGATCTCA ACTCGGAGATTGCTGAGGTGCGTGCTTGTGTTGTGAATGAAGAGAATGAGCTTGGAGAAACTGCTTTGTTCACTGCAGCT GAGAGGGGACACCTTGATGTTGTCAAGGAGCTGTTGAAACATTCCAACCTTAAAAAGAAGAACCGATCTGGCTTTGATCC TTTGCATATTGCTGCTAGTCAAGGCCACCATGGTATCCCTCACCATCCCTTTATTTTTCCTCAGAATCAATTCTGGCAAC AAGGAGCTACTCACAAAAGCTAACTGCTTATTCACTTATACTTTTAGTTGCCAATTTCAATTTCATTTTAATATTCACTT CATTGATTTAAGCACATGAGACTAAATTTGTCATTGATCAAGTAAGTTATATGAATTAAGCACTTATGTTGCTTGAGGTG TTAATTAAAGAAAATCAATAATTATGCTTTGAATGAAAAACTTGAGAGGAAAGTTATGAAGCAATAGAATCATATATGTT TTTATGTTATGGAGAAAAGCCTACCAAATTTGGAGATAGACCAATCTTTGTTTACTACTGTATTCTCTTAATTTAATGGC TGGCTTATTTGGACTCTTAACTGGTTGGCTCTGATAGCTTTTGGTTCATCCTTTGTGATGAGGACCTTCAAATTGTTGGT GTGTGATTTTATTGCGTCTTAATGTAGTTTAATGTGAGTACTTTGTTTTTTGTTCTTCACTGTAATCCATTGTATATTTT CGTTTGCAGCCATCGTTCAGGTTTTACTAGATTATGACCCTGGATTAAGCAAAACTATTGGTCCGTCCAATGCTACTCCG CTTATAACAGCGGCGACAAGAGGGCACGTGGAAGTGGTGAACGAGCTGCTGTCAAAGGATTGCAGCTTGTTGGAAATCGC TAGATCCAATGGCAAAAGTCCATTGCATTTGGCTGCTCGTCAGGGTCATGTGGAGATTGTAAGAGCCTTGCTCAGTAAAG ATCCACAGTTGGCTCGGAGGACCGACAAGAAAGGACAAACTGCGTTGCATATGGCAGTGAAAGGGCAAAGTGCTGATGTA GTGAAATTGCTTCTTGATGCAGATGCTGCTATTGTCATGCTTCCTGACAAATTTGGTAACACAGCATTACACGTGGCAAC CAGGAAAAAGCGAGTTGAGGTATGTCAACATTTGCAAAGCGTTACAAGCACCATGCAAATATAGATGAGACAGTACTATA CTACAAATTAAGATACTGAATAAATGAGGTTTTCATCTCATCTCATGACTAAGATGCCATGTCCTAGTAGTAGGGTACCT GAGTTTTTCAGTTTTGAACCTAGGGTACTATATTATATTCTACTAAAAATGCAAACAAAGCTGCTGATTTGGGGTGCGTT TGGAACAGTGTTGTTAATGGCGGTTGGCGGACTATGGCGGAGAGCCAAAAACCCGCCATGAGATTCCACCATGGCACCGC CATGACCAATATTTGATAACACTGGTGTGGAAGAATTTATTTGGGCAAGGGTTTATCTTAAAGCATAAGAGCTTTGCTAT TTGGCTCGAAGGGTCTCAATACGAACTGAACACATGTGATGTGAGCGTAGGAGTAAATTACGGGAATAGTTAAACATACA AAAGAGGGATTTAGGAGAATGTAATGAATTCCATATTTGCTTGGTGTTTGAATATGAATTGCTCGAGCCATAGAGCATTT CCCATAGCATAAACACTTGGTTAAGCGTATGATCTACCTGTAAGCTCTTTTTAGCTTATTTTGATAAGTTCCTCTAATTA GCAATAAACACTTGTACAGTTATACCTATATAAGCTCTATTGAACTTATTTCAATTAGTTTCTCAAACTAGCTTATCAAC AAACAGCAACCTTAGTATGTGGTTTAACATAAATTTGATCAGAAGTTTGAGGTCCTTTATTTTTTTTATTAACATAGATA CATGCAAAGCCTCCAGATATTTTTAAGCACCCATTACAGTTCCTAAAATGAAAAATCTAATTTTTTAGTTTCTCAATTTC TTGCACAGATAGTGAATGAGTTGTTAAATCTGCCAGACACCAATGTTAATGCATTAACCAGAGACCACAAAACAGCCCTC GACATTGCTGAAAATCTTCCCCTCTCTGAAGAGGCGTCAGATATAAAGGACTGCCTTTCTCGGTATGGGGCACTTAGAGC GAATGAGCTGAATCAACCAAGGGATGAACTGAGGAAAACTGTTACTCAGATTAAGAAAGACGTTCACACCCAGCTGGAGC AAACCAAGAGAACCAACAAAAATGTTCATAATATTTCCAAAGAGCTAAGGAAACTCCACAGGGAAGGAATCAATAACGCC ACAAACTCCGTGACAGTGGTGGCTGTGTTGTTTGCTACAGTTGCCTTTGCTGCTATATTCACCGTGCCTGGTGGGGATAA CGATGATGGCTCAGGAGTGGTAGCGGCCTATTCTGCTTTTAAAATCTTCTTCATCTTCAATGCTATTGCGCTTTTTACAT CTTTGGCTGTTGTGGTTGTTCAAATTACCCTGGTCAGAGGTGAAACTAAAGCAGAGAAAAGGGTGGTGGAGGTGATTAAC AAGCTTATGTGGTTGGCTTCTGTATGCACCTCAGTGGCGTTTATCGCGGCTTCATACATAGTTGTAGGTCGGAAGAATGA GTGGGCTGCAATTCTGGTTACAGTAGTTGGAGGTGTGATCATATCAGGAGTTATTGGCACCATGACATACTATGTAGTGA GGTCTAAGAGAAGCAGATCAATGAGGAAGAAGGAGAAGCAGCAGGCCAGGAGGAGTGGATCCAACTCATGGCATCATTCG GAGTTCTCTAACTCCGAGGTTGATCCAATTTACGCGCTTTGATTTTGAAAAATTGCAACCTTTTGAGGGATCATGAGACC AAATTATGGTGAAAAAAAGGTCAGGTACCTTAAGAGTTTCTGTTCACATTAGCTCTCTAAAGAGTTAACTAAGAAACTCC ATTGCAACATAGTTTGTACGCTGTACAGAGTGTTTATTCAAATGAAGCCTTGATCATCATTGTAGCTGCTAACTGGTGTC TTGCAGGGCCTAAGTATGCACATGTATCTTAACAACAGGTAGTAAATTTGCGAGAAGAATAAATCAAACATTGCTTTAAT TCGCACTTGTGTTGATATATCATCAAAATATGTCTGCTACCCCTGTTTGCTTACTGATTTTTTGTTACTAGATATTTCTT GGGGGGCTTAACACAACATACTCCTGGATGCTTGATAATGTGACAGAGAATGAAGTAGTAGTTATAAACTTATAATAGGG GGTTAATTAAAATTTATAATAATTGTTGATAAACTCATGACTTAAAAACTAAGGTTTGACCAATGAGTAGTTTTTTTTTT TTGAACCTAATGAGTGGTTAGTTTAAGTGGTATATGTTTCATTCTCTTTAAGTGGTACATGTTTTGAGTTCGAGTCTCAT CTCGAATATGGAAAAAATATTTGTTGGGAAGATAGTTTTGCCATATGTGAATGTTCCCGATTCGAAAGATTCGAAAGATC GTTTCCATTGCATTGGATAAAAAGAAGGTCCGCATTATGCTGTTCAGGCTATAATTAAAATTTTAGTATTTTATTTTGGC TCTAGTATTGACCTTCAACTCTTCAAAATTGTGCTACCGAATCTGAATTATTTTAAATGGTTATATCAATGCTTTTTATT TGGTTGGAATGTTTGAATTTGATATATATAAAATAATGAAGAATTGTCGTCACATGTGGCCAATTGAATGGTTGTAACAT GACAAGTTGGTTCTATCTTATATTGACACTAGAGCATAAGATAAGAACAAAACAACAAGAATAATACAACAATAACTACT ACTGATAATAATATTTGGATATTTTGCTTGCTTTCTGC
CDS sequence (LotjaGi5g1v0358900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATTTTGTTTTTTTTTTTCCAAATTTCATCATAATTAAAAAAGAAAAAAAAACCAAAATGTATTTGTCCATTTTTCA ATCCCCTGTTTCCAATGACTTTCCTCTTTCCCTTCCCTTTCCACTCATCTTCTCTTGTTTTATCATCATCATCATCTTCT TCAATCTTCTTCCTTCACTTCCACTCTCTGCTAAATGCTTTCCACACATAACAACACTTAGCACACCTCTCTGCTTTGTT TCCTCCATCACTCACATGGCTTCCAACTTCAACCAACCAGGAGGAGCTCTAGGTCAAAGGGACATAGAAAAGGAAAAGGC TGCTATGACTCCACCACAGACTCCACTTTCTGAGATTTCGCCGTCGCCGTCTCCGTCGTCATCCACGGCGCCGGCGCTGG TGCTGTCGAACTCCGGGAAGCGGATCGACCAGGCCGGGAAGAAGAAGTACGTGAAGCAGGTGACAGGGCGCCACAACGAC ACGGAGCTGCACCTGGCGGCGCAGAGGGGCGATGTTGGTGCGGTCAGGCAGATCCTTCTCGACATCGATTCTCAGATAAT GGGGACTCATGGCGGCGGCGGCGGCGGCGACGGCGATGTTGTTGATCTCAACTCGGAGATTGCTGAGGTGCGTGCTTGTG TTGTGAATGAAGAGAATGAGCTTGGAGAAACTGCTTTGTTCACTGCAGCTGAGAGGGGACACCTTGATGTTGTCAAGGAG CTGTTGAAACATTCCAACCTTAAAAAGAAGAACCGATCTGGCTTTGATCCTTTGCATATTGCTGCTAGTCAAGGCCACCA TGCCATCGTTCAGGTTTTACTAGATTATGACCCTGGATTAAGCAAAACTATTGGTCCGTCCAATGCTACTCCGCTTATAA CAGCGGCGACAAGAGGGCACGTGGAAGTGGTGAACGAGCTGCTGTCAAAGGATTGCAGCTTGTTGGAAATCGCTAGATCC AATGGCAAAAGTCCATTGCATTTGGCTGCTCGTCAGGGTCATGTGGAGATTGTAAGAGCCTTGCTCAGTAAAGATCCACA GTTGGCTCGGAGGACCGACAAGAAAGGACAAACTGCGTTGCATATGGCAGTGAAAGGGCAAAGTGCTGATGTAGTGAAAT TGCTTCTTGATGCAGATGCTGCTATTGTCATGCTTCCTGACAAATTTGGTAACACAGCATTACACGTGGCAACCAGGAAA AAGCGAGTTGAGATAGTGAATGAGTTGTTAAATCTGCCAGACACCAATGTTAATGCATTAACCAGAGACCACAAAACAGC CCTCGACATTGCTGAAAATCTTCCCCTCTCTGAAGAGGCGTCAGATATAAAGGACTGCCTTTCTCGGTATGGGGCACTTA GAGCGAATGAGCTGAATCAACCAAGGGATGAACTGAGGAAAACTGTTACTCAGATTAAGAAAGACGTTCACACCCAGCTG GAGCAAACCAAGAGAACCAACAAAAATGTTCATAATATTTCCAAAGAGCTAAGGAAACTCCACAGGGAAGGAATCAATAA CGCCACAAACTCCGTGACAGTGGTGGCTGTGTTGTTTGCTACAGTTGCCTTTGCTGCTATATTCACCGTGCCTGGTGGGG ATAACGATGATGGCTCAGGAGTGGTAGCGGCCTATTCTGCTTTTAAAATCTTCTTCATCTTCAATGCTATTGCGCTTTTT ACATCTTTGGCTGTTGTGGTTGTTCAAATTACCCTGGTCAGAGGTGAAACTAAAGCAGAGAAAAGGGTGGTGGAGGTGAT TAACAAGCTTATGTGGTTGGCTTCTGTATGCACCTCAGTGGCGTTTATCGCGGCTTCATACATAGTTGTAGGTCGGAAGA ATGAGTGGGCTGCAATTCTGGTTACAGTAGTTGGAGGTGTGATCATATCAGGAGTTATTGGCACCATGACATACTATGTA GTGAGGTCTAAGAGAAGCAGATCAATGAGGAAGAAGGAGAAGCAGCAGGCCAGGAGGAGTGGATCCAACTCATGGCATCA TTCGGAGTTCTCTAACTCCGAGGTTGATCCAATTTACGCGCTTTGA
Protein sequence (LotjaGi5g1v0358900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHFVFFFPNFIIIKKEKKTKMYLSIFQSPVSNDFPLSLPFPLIFSCFIIIIIFFNLLPSLPLSAKCFPHITTLSTPLCFV SSITHMASNFNQPGGALGQRDIEKEKAAMTPPQTPLSEISPSPSPSSSTAPALVLSNSGKRIDQAGKKKYVKQVTGRHND TELHLAAQRGDVGAVRQILLDIDSQIMGTHGGGGGGDGDVVDLNSEIAEVRACVVNEENELGETALFTAAERGHLDVVKE LLKHSNLKKKNRSGFDPLHIAASQGHHAIVQVLLDYDPGLSKTIGPSNATPLITAATRGHVEVVNELLSKDCSLLEIARS NGKSPLHLAARQGHVEIVRALLSKDPQLARRTDKKGQTALHMAVKGQSADVVKLLLDADAAIVMLPDKFGNTALHVATRK KRVEIVNELLNLPDTNVNALTRDHKTALDIAENLPLSEEASDIKDCLSRYGALRANELNQPRDELRKTVTQIKKDVHTQL EQTKRTNKNVHNISKELRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGDNDDGSGVVAAYSAFKIFFIFNAIALF TSLAVVVVQITLVRGETKAEKRVVEVINKLMWLASVCTSVAFIAASYIVVGRKNEWAAILVTVVGGVIISGVIGTMTYYV VRSKRSRSMRKKEKQQARRSGSNSWHHSEFSNSEVDPIYAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 37 | 37 | - | – | |
| TMHMM | 35 | 57 | 23 | - | – | |
| Phobius | 38 | 57 | 20 | - | – | |
| Phobius | 58 | 507 | 450 | - | – | |
| MobiDBLite | 107 | 131 | 25 | - | – | |
| PANTHER | 114 | 671 | 558 | 1.0E-257 | – | |
| PANTHER | 114 | 671 | 558 | 1.0E-257 | – | |
| Gene3D | 137 | 277 | 141 | 6.0E-21 | ||
| SMART | 158 | 187 | 30 | 510.0 | ||
| SUPERFAMILY | 163 | 435 | 273 | 1.19E-51 | ||
| Pfam | 163 | 279 | 117 | 3.9E-14 | ||
| SMART | 221 | 252 | 32 | 0.017 | ||
| ProSiteProfiles | 221 | 245 | 25 | 8.63 | ||
| ProSiteProfiles | 221 | 431 | 211 | 44.856 | ||
| ProSiteProfiles | 253 | 275 | 23 | 9.805 | ||
| SMART | 253 | 282 | 30 | 0.008 | ||
| Gene3D | 278 | 480 | 203 | 3.3E-38 | ||
| SMART | 287 | 316 | 30 | 0.81 | ||
| Pfam | 287 | 345 | 59 | 1.8E-11 | ||
| SMART | 321 | 350 | 30 | 3.2E-5 | ||
| ProSiteProfiles | 321 | 353 | 33 | 12.823 | ||
| Pfam | 353 | 417 | 65 | 3.3E-11 | ||
| SMART | 355 | 384 | 30 | 7.5E-4 | ||
| ProSiteProfiles | 355 | 387 | 33 | 10.499 | ||
| SMART | 389 | 419 | 31 | 0.0021 | ||
| Pfam | 503 | 609 | 107 | 1.2E-27 | ||
| Phobius | 508 | 530 | 23 | - | – | |
| TMHMM | 508 | 530 | 23 | - | – | |
| Phobius | 531 | 549 | 19 | - | – | |
| Phobius | 550 | 570 | 21 | - | – | |
| TMHMM | 550 | 572 | 23 | - | – | |
| Phobius | 571 | 589 | 19 | - | – | |
| Phobius | 590 | 610 | 21 | - | – | |
| TMHMM | 592 | 609 | 18 | - | – | |
| Phobius | 611 | 615 | 5 | - | – | |
| Phobius | 616 | 641 | 26 | - | – | |
| TMHMM | 619 | 641 | 23 | - | – | |
| Phobius | 642 | 681 | 40 | - | – | |
| MobiDBLite | 649 | 681 | 33 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0358900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…