Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0359700 |
| Transcript ID | LotjaGi5g1v0359700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family member; TAIR: AT2G39350.1 ABC-2 type transporter family protein; Swiss-Prot: sp|O80946|AB1G_ARATH ABC transporter G family member 1; TrEMBL-Plants: tr|I1NJ72|I1NJ72_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0359700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67433653..67437020) extracted from Lotus japonicus Gifu genome v1.2.
CACAAATCCTCTTGTTAAGGAAAAATGAATATAAGAAGGAAGTGGCAGAGGGAACACAGTAACAGTGAGTATCCCTTGAA GCTTCTAAGAAGATAATTTCAAGAATAGAAAAGAAAAAAAATGGTCATAGTTAAAGTATTGGACCGAAATATATGGTATT GTATGGGCAATGCTTACGCCACAGTAGATGAACTCTCAACCTAACTCTCATGAACTTGAACACACATCTTAAAAATTTGA AGCCATGTGGCGTGAATGTACCAATTACAAAACCTCACATGCTCCATCTCCATGAAATGAAATTATAAAAAGAGACGTGA AAGGCAATTGATAAATTAGGAGCTGTAGGTCACCTCTCCCACACCTCCAAACATAAGTCAAATTTTAATACCTCAGTCCA TAAATAAACTACCACCCCCCACCCCTAAACACACTATTCCATTCATTACCTTCCTTCTCCATCAATCTTCCTAATTTCTC TCTCAATTTCCTCACTCCATTATATATATACACTACACTCACATATTGGCTATATATATATAATCAATCTCATCAAACAA CACAACCCTAGCTAGCAACTAGCAACTAGCAACAACACAACACAACACAACACCACCTTCATTCATTCATTCTCTTTGTT CTTCTTCACCCAATTCTGCTAAAACTACGCCGTTACTTCACGCCTCTCATGCTCTTCACTCTCTGTTACTCTTCTACTTG CAACTACTTCACCTGAAAGAGAGATAACGCTGTGAAAGTTAACGATGTCATCTCGCATTGTGGCGGAGAATGTCACTGAT GATGCGACGTCGTATCTAGACCTCATGGAGCTCAGCGACCTCACGCGCCGCCCTGCCTCCGGCGACTTGCCGACGCTCGG GCAGCTCCTCAAGCACGTGGGAGACGCGCGTAAGGAGGCTGCCGGCGACGGCAGCGAGACGCCGCTGCACCACGCGCTTG ATGTTGTCGGGATGGAGCCTCGCTCGCTGCCGTTTGTCCTCTCCTTCAGCAACCTCACCTACAGCGTTAAGGTGAAACGG AAGCTGAGCTTCTCATCTATCTTCCCTCGCCGCCGGAACCGACTGGGCGCGGTGGAGGATGCACCGGCGGTCGAGGAGAG TGTTTTCTCCCGGACGAAGACTCTTCTGAATGACATCTCCGGTGAAGCGCGCGACGGTGAAATCATGGCGGTTCTCGGCG CTAGTGGCTCCGGGAAGTCAACACTAATCGACGCGTTGGCTAACAGAATTGCTAAGGGGAGGCTGAAAGGCACTCTGGCC CTGAACGGCGAGGCGTTGGAGTCGCGCCTGCTGAAGGTGATTTCCGCTTACGTGATGCAAGACGACCTCCTCTTCCCGAT GCTCACCGTCGAGGAAACTCTCACCTTCGCCGCGGAGTTTCGATTACCTCGCACGCTCTCCAAATCGAAGAAAAAGGCTC GAGTACAGGCCTTAATCGACCAGCTAGGCCTTCGAAACGCGGCAAAAACTGTAATCGGCGATGAAGGCCACCGCGGAGTC TCCGGCGGAGAGCGCCGTCGCGTCTCAATCGGAATCGACATAATCCACGACCCGATTCTGCTCTTCCTCGACGAGCCAAC CTCCGGACTAGACTCCACCAGCGCGTTCATGGTGGTGAAGGTTCTCCAGAGAATCGCACAGAGCGGAAGCATCGTGATCA TGTCAATTCATCAACCAAGCTACAGAATCCTTGGCCTCCTTGACCGAATGATCTTCCTCTCCCGCGGCCAAACCGTTTAC AGCGGTTCTCCGACGCAATTGCCGTCGTTCTTCGCCGAATTCGGCCACCCGCTGCCGGATAGCGACAACAGAACAGAGTT CGCGTTGGATCTAATTCGCGATCTAGAAGGTTCCCCTGGCGGAACAAAAAGCTTGGTCGAGTTCAACAAATCATGGCAGA ACATGACCAAGGTTCACTCTCACTCTGTTTCATCACAACCAGAACGCCCAAACGGCATGTCATTGAAGGAAGCAATCAGC GCGAGCATTTCGCGCGGGAAGTTAGTCTCCGGCGCGACCAACACCGCAACCACAACCCCGTCGTCGATGGTTCCGACATT CGCAAACCCGTTCTGGATCGAGATGGTAACTCTGTCAAAACGATCGTTCACGGACTCAAGAAGAAAACCAGAGCTATTCG GAATTCGCCTCGGCGCGGTGATGGTAACCGGTTTCATCCTCGCCACCATGTTCTGGAACCTCGATAACTCTCCCAAAGGA GTTCAAGAGAGGCTCGGATTCTTCGCGTTTGCTATGTCCACCACCTTCTACACCACCGCCGACGCGCTCCCCGTGTTCCT CCAGGAACGGTACATCTTCATGCGGGAAACTGCTTACAACGCGTACCGGAGATCCTCCTATCTCATCTCACACGCTCTGG TGTCATTACCGCCGCTGGCGTTTCTCTCGCTCGCTTTCGCTGTTATAACGTTTTGGGCTGTGGGCTTAGACGGCGGAGCT TCGGGCTTTTTGTTTTATTTTCTGATCATCTTCGCTTCTTTCTGGGCTGGAAACTCGTTCGTCACGTTCCTATCCGGTGT AGTACCTCATGTGATGCTTGGTTACACCATTGTTGTTGCAATTCTAGCTTATTTCTTGCTGCTTAGTGGATTCTTCATCA ACAGGGACAGGATTCCGAGCTACTGGATTTGGTTCCATTACTTGTCTCTAGTGAAGTATCCTTATGAAGCTGTGTTGCAG AACGAGTTTGATGATCCTGTGAAGTGTTTTGTTAGAGGGGTGCAGATTTTTGACAACAGTCCACTGAGGTCAGTGCCGTA TGAGCTGAAATTGAAGCTTCTGGGGAGCATGAGCGGCACGCTGGGGACGAACATCACGGCCACGACGTGCTTGACGACGG GTGCTGATATATTGCAGCAGAATGGGGTGACGGAGTTGAGCAAGTGGAACTGTTTGTGGATCACTGTGGCTTGGGGATTC TTCTTCAGGTTTTTGTTCTACTTGGCTTTGTTAGTGGGTAGCAAGAACAAGAGGAGTTGATGATGGATTGTAGTTAAGTT AATTAACCTATAAGATCAGGAAAAAAAAAATGTTTGGGTTTCGGTTTTAATCGGTTTGAATTTGTGTATCATTATATGAT AATAAATTTTTTTTCTCTATTTTATTTGTTCATGATTTATGATTAGTTCTGTAATCTGTTCTTGGTGAGTGCAGACATTT CTGGCACAAAATGTGATCTCACTTTGGTTGATTAGTTTGGAATTTGCATATGATATGATGTGATACAAACATTCGTCAAT AGTGAACAGTTTTATAAGTTATAGTACTGGATGCATGTAGGAATATATCTTTTGGGGCCTATGATGTTACTCAAATGAAA AGAGAGCC
CDS sequence (LotjaGi5g1v0359700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCATCTCGCATTGTGGCGGAGAATGTCACTGATGATGCGACGTCGTATCTAGACCTCATGGAGCTCAGCGACCTCAC GCGCCGCCCTGCCTCCGGCGACTTGCCGACGCTCGGGCAGCTCCTCAAGCACGTGGGAGACGCGCGTAAGGAGGCTGCCG GCGACGGCAGCGAGACGCCGCTGCACCACGCGCTTGATGTTGTCGGGATGGAGCCTCGCTCGCTGCCGTTTGTCCTCTCC TTCAGCAACCTCACCTACAGCGTTAAGGTGAAACGGAAGCTGAGCTTCTCATCTATCTTCCCTCGCCGCCGGAACCGACT GGGCGCGGTGGAGGATGCACCGGCGGTCGAGGAGAGTGTTTTCTCCCGGACGAAGACTCTTCTGAATGACATCTCCGGTG AAGCGCGCGACGGTGAAATCATGGCGGTTCTCGGCGCTAGTGGCTCCGGGAAGTCAACACTAATCGACGCGTTGGCTAAC AGAATTGCTAAGGGGAGGCTGAAAGGCACTCTGGCCCTGAACGGCGAGGCGTTGGAGTCGCGCCTGCTGAAGGTGATTTC CGCTTACGTGATGCAAGACGACCTCCTCTTCCCGATGCTCACCGTCGAGGAAACTCTCACCTTCGCCGCGGAGTTTCGAT TACCTCGCACGCTCTCCAAATCGAAGAAAAAGGCTCGAGTACAGGCCTTAATCGACCAGCTAGGCCTTCGAAACGCGGCA AAAACTGTAATCGGCGATGAAGGCCACCGCGGAGTCTCCGGCGGAGAGCGCCGTCGCGTCTCAATCGGAATCGACATAAT CCACGACCCGATTCTGCTCTTCCTCGACGAGCCAACCTCCGGACTAGACTCCACCAGCGCGTTCATGGTGGTGAAGGTTC TCCAGAGAATCGCACAGAGCGGAAGCATCGTGATCATGTCAATTCATCAACCAAGCTACAGAATCCTTGGCCTCCTTGAC CGAATGATCTTCCTCTCCCGCGGCCAAACCGTTTACAGCGGTTCTCCGACGCAATTGCCGTCGTTCTTCGCCGAATTCGG CCACCCGCTGCCGGATAGCGACAACAGAACAGAGTTCGCGTTGGATCTAATTCGCGATCTAGAAGGTTCCCCTGGCGGAA CAAAAAGCTTGGTCGAGTTCAACAAATCATGGCAGAACATGACCAAGGTTCACTCTCACTCTGTTTCATCACAACCAGAA CGCCCAAACGGCATGTCATTGAAGGAAGCAATCAGCGCGAGCATTTCGCGCGGGAAGTTAGTCTCCGGCGCGACCAACAC CGCAACCACAACCCCGTCGTCGATGGTTCCGACATTCGCAAACCCGTTCTGGATCGAGATGGTAACTCTGTCAAAACGAT CGTTCACGGACTCAAGAAGAAAACCAGAGCTATTCGGAATTCGCCTCGGCGCGGTGATGGTAACCGGTTTCATCCTCGCC ACCATGTTCTGGAACCTCGATAACTCTCCCAAAGGAGTTCAAGAGAGGCTCGGATTCTTCGCGTTTGCTATGTCCACCAC CTTCTACACCACCGCCGACGCGCTCCCCGTGTTCCTCCAGGAACGGTACATCTTCATGCGGGAAACTGCTTACAACGCGT ACCGGAGATCCTCCTATCTCATCTCACACGCTCTGGTGTCATTACCGCCGCTGGCGTTTCTCTCGCTCGCTTTCGCTGTT ATAACGTTTTGGGCTGTGGGCTTAGACGGCGGAGCTTCGGGCTTTTTGTTTTATTTTCTGATCATCTTCGCTTCTTTCTG GGCTGGAAACTCGTTCGTCACGTTCCTATCCGGTGTAGTACCTCATGTGATGCTTGGTTACACCATTGTTGTTGCAATTC TAGCTTATTTCTTGCTGCTTAGTGGATTCTTCATCAACAGGGACAGGATTCCGAGCTACTGGATTTGGTTCCATTACTTG TCTCTAGTGAAGTATCCTTATGAAGCTGTGTTGCAGAACGAGTTTGATGATCCTGTGAAGTGTTTTGTTAGAGGGGTGCA GATTTTTGACAACAGTCCACTGAGGTCAGTGCCGTATGAGCTGAAATTGAAGCTTCTGGGGAGCATGAGCGGCACGCTGG GGACGAACATCACGGCCACGACGTGCTTGACGACGGGTGCTGATATATTGCAGCAGAATGGGGTGACGGAGTTGAGCAAG TGGAACTGTTTGTGGATCACTGTGGCTTGGGGATTCTTCTTCAGGTTTTTGTTCTACTTGGCTTTGTTAGTGGGTAGCAA GAACAAGAGGAGTTGA
Protein sequence (LotjaGi5g1v0359700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSRIVAENVTDDATSYLDLMELSDLTRRPASGDLPTLGQLLKHVGDARKEAAGDGSETPLHHALDVVGMEPRSLPFVLS FSNLTYSVKVKRKLSFSSIFPRRRNRLGAVEDAPAVEESVFSRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALAN RIAKGRLKGTLALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRTLSKSKKKARVQALIDQLGLRNAA KTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLD RMIFLSRGQTVYSGSPTQLPSFFAEFGHPLPDSDNRTEFALDLIRDLEGSPGGTKSLVEFNKSWQNMTKVHSHSVSSQPE RPNGMSLKEAISASISRGKLVSGATNTATTTPSSMVPTFANPFWIEMVTLSKRSFTDSRRKPELFGIRLGAVMVTGFILA TMFWNLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRSSYLISHALVSLPPLAFLSLAFAV ITFWAVGLDGGASGFLFYFLIIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLLSGFFINRDRIPSYWIWFHYL SLVKYPYEAVLQNEFDDPVKCFVRGVQIFDNSPLRSVPYELKLKLLGSMSGTLGTNITATTCLTTGADILQQNGVTELSK WNCLWITVAWGFFFRFLFYLALLVGSKNKRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 464 | 464 | - | – | |
| PANTHER | 35 | 748 | 714 | 0.0 | – | |
| PANTHER | 35 | 748 | 714 | 0.0 | – | |
| ProSiteProfiles | 110 | 352 | 243 | 17.721 | ||
| Gene3D | 118 | 343 | 226 | 7.0E-52 | – | |
| SUPERFAMILY | 123 | 343 | 221 | 1.87E-43 | ||
| Pfam | 128 | 280 | 153 | 1.1E-23 | ||
| SMART | 137 | 329 | 193 | 7.4E-10 | ||
| ProSitePatterns | 252 | 266 | 15 | - | ||
| Pfam | 448 | 655 | 208 | 9.4E-42 | ||
| TMHMM | 464 | 486 | 23 | - | – | |
| Phobius | 465 | 486 | 22 | - | – | |
| Phobius | 487 | 497 | 11 | - | – | |
| TMHMM | 497 | 519 | 23 | - | – | |
| Phobius | 498 | 519 | 22 | - | – | |
| Phobius | 520 | 539 | 20 | - | – | |
| TMHMM | 539 | 561 | 23 | - | – | |
| Phobius | 540 | 566 | 27 | - | – | |
| Phobius | 567 | 571 | 5 | - | – | |
| Phobius | 572 | 593 | 22 | - | – | |
| TMHMM | 574 | 596 | 23 | - | – | |
| Phobius | 594 | 604 | 11 | - | – | |
| TMHMM | 603 | 625 | 23 | - | – | |
| Phobius | 605 | 625 | 21 | - | – | |
| Phobius | 626 | 723 | 98 | - | – | |
| TMHMM | 724 | 746 | 23 | - | – | |
| Phobius | 724 | 745 | 22 | - | – | |
| Phobius | 746 | 751 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi5g1v0359700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…