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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0363500 |
| Transcript ID | LotjaGi5g1v0363500.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transporter; TAIR: AT2G43330.1 inositol transporter 1; Swiss-Prot: sp|Q8VZR6|INT1_ARATH Inositol transporter 1; TrEMBL-Plants: tr|I1NJB7|I1NJB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0363500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67833658..67837471) extracted from Lotus japonicus Gifu genome v1.2.
GAAATAGCAAAAAAAGATAAGAGCGAGTCATGTGGTGGTGGTGGAGCTATCTGCCGAGTCAGACGATAAGCACATTTGCA GCTTATGATCCAAATAATGAATAATTGAATTGAATCTGATCCATCCATGTAAGCTAAAGCAGAACAAGCTAATAGTAGTT AATTTCCTTTCCTAAGTAAGCAAGTTGCAGTGGCCAGTTGGGATCACCACACAACAGAACAGTTGACCCTCCTGCTCTGT TATTGTTGTTCTTTCTGTTTCTGCTGCTTAATTAATTCATCATTCAACATATTCACCATGACGATTAGTACTACTACTAC TACTACTGTACCGTCGTCCATGCCAGGAAGCTCAGGGTATTTGGAGATGTACCCTCAGAGGAAAATTTCCCTCTTCAAGA ATCCTTACATTTTGGGCCTCACTGCTGTCGCTAGCATTGGTGGACTCCTCTTTGGCTACGACACAGGTGTTATCTCGGGA GCCCTTCTCTATATCAAAGATGATTTTCAGGAGGTCAGAGACAGTTATTTTCTACAGGTACGTTCAATACTTTTCCCCCT CTTTCAATCTTAACAATGTACTTTACTTTATTTTAATCAGTGTATTCAATTCAAAGGAACTAGTTTTCATATTTGATATG GTCACGGTCACACTCACACACAACCTAACCTCACTACAAAATGGAATTTGTTGTGGAGAAGTAGCTAGGGTGATCTCACT ATAATTTTTTTCTCACTGGATTTTCTAATTGTTTAAGTTGGCAGGAAACAATTGTCAGCATGGCAGTGGCTGGTGCAATT GTTGGGGCAGCAGCAGGTGGTTGGATAAATGATGCTTATGGAAGAAAGAAGGCAACCATCATTGCAGATGTTATCTTTGC ACTGGGAGCAATTGTCATGGCTGCTGCACCAGATCCTTATATTCTCATAGTTGGCCGTCTTTTGGTTGGTTTCGGTGTTG GTATAGCTTCTGTTACTGCTCCTGTGTATATTGCAGAGCTGTCACCATCAGAAATAAGGGGGAGCTTAGTAAGCACTAAT GTGCTTATGATCACTGGAGGACAGTTTCTTTCCTATCTCATAAATCTTGCTTTTACACAGGTCAATTTTCCATATTTGTT TTTATATTAAATAGAGCATTGTTTTGTATCACGTTAAATAAGTTGCTGAACACTAAGGCTGCATTTGGGGTTAACAACTT AATTAAGTGCTTATTTATAAGTTTATTTGAAAAACTAGTTGAAATATGCTCAGAATAGTTTATTGGTAGATATAAACGTT TACTCATTAGCGGATTCGAGCAGCTTACGAAAATAGGTCCAAAACAGCTTATAGGTAGGTCATAAGTTATTTTCGTAAGC TTATCCCAACACTTGCATAAGTGTTTATGATGTAAGATAAACTTAAATTAGTTATTTCAAACGCAGACTAATTATGTCTT GTTTCCTAAATTATATAGACCTCTTATTTGAAATGGTAAAGTTCAGTTTCTCTCATGTGGTTTGGCATGTTATCCTTGTT CCACCTTGTGACGTGAACTTTATACCACACTTCCTTTCACTTTCTCTATTCTCACATATCTAGTGTTTCTTTTTCTCGCC CCCTCATGATTTGGCATGTTTTCATTAATCTGCCTAGCAATGTGAACTTTATTACTCTTCATTTCACTTTGCTTCAATTT CACATAACAGTTGTCTCTTTTTCCTGCCTCCATCCATTTTCTAATGGAATCAATAGATGAACATCTCTTGCAATCTAACT TACTGAAAAAAGGGCAAAGAAATACATAGTTAAATATGGGATTATGCTACCTTTTCAAGGTCAAGGGTGTTATTCCGCTG ACCCCTCACATTCTTAATCAAGCAGGTCCCCGGAACATGGCGATGGATGCTGGGAGTTTCAGGTTTGCCTGCAGTAGTTC AGTTTTTCCTCATGCTCTTACTGCCTGAATCCCCCAGATGGCTCTTTATAAAGGTCACAGAATTTTCATAAGCTTACCTT CAAAGTCTATTTTCTTTAATATAATTTTTTCCTACTTGTTCAGAATAGGGAAGATGAAGCTATTGCCGTGCTTACTAGGA TCTATGACTTTGATCGTTTAGAGGATGAAGTTTCCTCAATTACAACTCAGTTAGAGCAAGACCCCCAAAAAAGGGATGAT ATCAGATATTTGGATGTTTTTAAATCAAAAGAAATCAGGCTTGCATTCCTTGCTGGAGGTGGATTGCAGGTAAGAAAAAG TTCACTTGGGATATCATTGTTGGGAAAATAACTTCTCTCTTGCTATTAAAGGATTGATTTGCATAAATATTCTTTTCGTA AACAAGCCATGGTGGCACTGCAAAACTGGATTTCACAACATTACCCTAAAAAACAACTTTTTCATCAATGTATCAGACAT AAATAACTTCACTTTCGCCATAATCAATTTTGCCAAAACCAATTTTATCCAAAATCAATTGTGACAAATGATCAAACATG TAAGAAATGTGTTACTTATAGCATCCCATTTTGTCTGTGAAGGCTTTTCAGCAATTCACAGGTATAAACACAGTGATGTA CTACAGCCCCACCATTGTCCAAATGGCTGGCTTCCACTCTAATGAGTTGGCTCTTCTCCTCTCTCTCATAATTGCCGGCA TGAATGCCACCGGAACAATTCTCGGCATATACCTTATTGACCATGCAGGGAGGAAGAAACTAGCTCTATATAGCTTAGGA GGAGTAATAGCATCTCTGATCATCCTCTCCTTTTCATTCTTTAACCAATCATCTGCAAATGGTTTGTATGGATGGTTTGC AGTTTTAGGTTTGGCCCTATATATCTCGTTCTTCTCACCGGGGATGGGGACAGTGCCATGGACAGTAAACTCAGAGATAT ATCCTCAAAAATACAGAGGAATGTGTGGAGGCATGTCAGCTACTGTGAATTGGGTTTCAAACTTGATTGTGGCTCAGTCG TTTCTGTCACTTGCTGGTGCTGCAGGGGCTGGTTTTACTTTCTTGCTTCTTGCTGTTATAGCTGTGCTTGCCTTTCTTTT TGTGGTTTTGTATGTTCCTGAGACCAAAGGTTTGACATTTGATGAAGTGGAGCTGTTATGGAAGGAGAGAGCTTGGGGCA AGAATCCTGAAACTCTAAGCCTTCTTCAGTCCTAGGAATATATCCAAACCTTAAATACAGTGCACTGTATATGTATGTTG TTAATTATGCTGTGATTGATTGTTGATGAGAGGTAAGCACAGTTAAGAAAGCACAAGAGTGAGAGAGTGACCACCATAAA TCCAAAACACACACTATTTTTTGTTTTACAAATGATCTTTTGGGCACTTAGCTTGAAGTTGGAGACAAGAAGTTGGCATT CAAACTTTTGCTTGTGTTGCAAGTTTGCAACATGAACATTCTATTTTTATAGTTGATTCATATTTTTTTTTTCTTCCAAT TCCAACATAAGTGAAAAAGGGTTCTTTACAGTTTACACAATTTCTTCAGAATCTGTGAAGTTATTTCATTTCATCCATTT TGTTATGTGTATGACAGGTTCCTTTTGTAAGCATGACTCAGAAAGCTTAATTGACTAATGGAATTCTTAACTAAATTTAA AACTCGTTGTAATCTATATTCATGATGGGGATAGAAACACGTGTTCCTCTTCCTATGGTGTGAATAGATTTGGTTTCGTC AAACTCGTGCTGATACTGTATTATAATCCAATTCCATCAAAATACAGGGAACTTTATTTTCATTAATCTTTTGAGATAAA CATCTGAGTAGATAAATCTTTAGATGCGTGATGCAATTTGATGTGAAAGAAAAC
CDS sequence (LotjaGi5g1v0363500.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGATTAGTACTACTACTACTACTACTGTACCGTCGTCCATGCCAGGAAGCTCAGGGTATTTGGAGATGTACCCTCA GAGGAAAATTTCCCTCTTCAAGAATCCTTACATTTTGGGCCTCACTGCTGTCGCTAGCATTGGTGGACTCCTCTTTGGCT ACGACACAGGTGTTATCTCGGGAGCCCTTCTCTATATCAAAGATGATTTTCAGGAGGTCAGAGACAGTTATTTTCTACAG GAAACAATTGTCAGCATGGCAGTGGCTGGTGCAATTGTTGGGGCAGCAGCAGGTGGTTGGATAAATGATGCTTATGGAAG AAAGAAGGCAACCATCATTGCAGATGTTATCTTTGCACTGGGAGCAATTGTCATGGCTGCTGCACCAGATCCTTATATTC TCATAGTTGGCCGTCTTTTGGTTGGTTTCGGTGTTGGTATAGCTTCTGTTACTGCTCCTGTGTATATTGCAGAGCTGTCA CCATCAGAAATAAGGGGGAGCTTAGTAAGCACTAATGTGCTTATGATCACTGGAGGACAGTTTCTTTCCTATCTCATAAA TCTTGCTTTTACACAGGTCCCCGGAACATGGCGATGGATGCTGGGAGTTTCAGGTTTGCCTGCAGTAGTTCAGTTTTTCC TCATGCTCTTACTGCCTGAATCCCCCAGATGGCTCTTTATAAAGAATAGGGAAGATGAAGCTATTGCCGTGCTTACTAGG ATCTATGACTTTGATCGTTTAGAGGATGAAGTTTCCTCAATTACAACTCAGTTAGAGCAAGACCCCCAAAAAAGGGATGA TATCAGATATTTGGATGTTTTTAAATCAAAAGAAATCAGGCTTGCATTCCTTGCTGGAGGTGGATTGCAGGCTTTTCAGC AATTCACAGGTATAAACACAGTGATGTACTACAGCCCCACCATTGTCCAAATGGCTGGCTTCCACTCTAATGAGTTGGCT CTTCTCCTCTCTCTCATAATTGCCGGCATGAATGCCACCGGAACAATTCTCGGCATATACCTTATTGACCATGCAGGGAG GAAGAAACTAGCTCTATATAGCTTAGGAGGAGTAATAGCATCTCTGATCATCCTCTCCTTTTCATTCTTTAACCAATCAT CTGCAAATGGTTTGTATGGATGGTTTGCAGTTTTAGGTTTGGCCCTATATATCTCGTTCTTCTCACCGGGGATGGGGACA GTGCCATGGACAGTAAACTCAGAGATATATCCTCAAAAATACAGAGGAATGTGTGGAGGCATGTCAGCTACTGTGAATTG GGTTTCAAACTTGATTGTGGCTCAGTCGTTTCTGTCACTTGCTGGTGCTGCAGGGGCTGGTTTTACTTTCTTGCTTCTTG CTGTTATAGCTGTGCTTGCCTTTCTTTTTGTGGTTTTGTATGTTCCTGAGACCAAAGGTTTGACATTTGATGAAGTGGAG CTGTTATGGAAGGAGAGAGCTTGGGGCAAGAATCCTGAAACTCTAAGCCTTCTTCAGTCCTAG
Protein sequence (LotjaGi5g1v0363500.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTISTTTTTTVPSSMPGSSGYLEMYPQRKISLFKNPYILGLTAVASIGGLLFGYDTGVISGALLYIKDDFQEVRDSYFLQ ETIVSMAVAGAIVGAAAGGWINDAYGRKKATIIADVIFALGAIVMAAAPDPYILIVGRLLVGFGVGIASVTAPVYIAELS PSEIRGSLVSTNVLMITGGQFLSYLINLAFTQVPGTWRWMLGVSGLPAVVQFFLMLLLPESPRWLFIKNREDEAIAVLTR IYDFDRLEDEVSSITTQLEQDPQKRDDIRYLDVFKSKEIRLAFLAGGGLQAFQQFTGINTVMYYSPTIVQMAGFHSNELA LLLSLIIAGMNATGTILGIYLIDHAGRKKLALYSLGGVIASLIILSFSFFNQSSANGLYGWFAVLGLALYISFFSPGMGT VPWTVNSEIYPQKYRGMCGGMSATVNWVSNLIVAQSFLSLAGAAGAGFTFLLLAVIAVLAFLFVVLYVPETKGLTFDEVE LLWKERAWGKNPETLSLLQS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | - | – | |
| PANTHER | 13 | 499 | 487 | 6.9E-258 | – | |
| PANTHER | 13 | 499 | 487 | 6.9E-258 | – | |
| TIGRFAM | 32 | 479 | 448 | 7.7E-119 | ||
| Gene3D | 34 | 487 | 454 | 1.9E-132 | – | |
| SUPERFAMILY | 34 | 480 | 447 | 1.44E-72 | ||
| TMHMM | 37 | 59 | 23 | - | – | |
| Phobius | 37 | 66 | 30 | - | – | |
| ProSiteProfiles | 41 | 472 | 432 | 54.594 | ||
| Pfam | 42 | 483 | 442 | 5.8E-119 | ||
| CDD | 44 | 470 | 427 | 5.2456E-167 | – | |
| PRINTS | 49 | 59 | 11 | 3.0E-27 | ||
| Phobius | 67 | 77 | 11 | - | – | |
| Phobius | 78 | 100 | 23 | - | – | |
| TMHMM | 79 | 101 | 23 | - | – | |
| Phobius | 101 | 111 | 11 | - | – | |
| TMHMM | 110 | 129 | 20 | - | – | |
| Phobius | 112 | 129 | 18 | - | – | |
| Phobius | 130 | 134 | 5 | - | – | |
| TMHMM | 134 | 156 | 23 | - | – | |
| PRINTS | 135 | 154 | 20 | 3.0E-27 | ||
| Phobius | 135 | 156 | 22 | - | – | |
| ProSitePatterns | 140 | 165 | 26 | - | ||
| Phobius | 157 | 167 | 11 | - | – | |
| Phobius | 168 | 190 | 23 | - | – | |
| TMHMM | 169 | 191 | 23 | - | – | |
| Phobius | 191 | 195 | 5 | - | – | |
| TMHMM | 196 | 218 | 23 | - | – | |
| Phobius | 196 | 218 | 23 | - | – | |
| Phobius | 219 | 280 | 62 | - | – | |
| Phobius | 281 | 304 | 24 | - | – | |
| PRINTS | 293 | 303 | 11 | 3.0E-27 | ||
| Phobius | 305 | 318 | 14 | - | – | |
| Phobius | 319 | 343 | 25 | - | – | |
| TMHMM | 319 | 341 | 23 | - | – | |
| ProSitePatterns | 338 | 354 | 17 | - | ||
| Phobius | 344 | 349 | 6 | - | – | |
| Phobius | 350 | 370 | 21 | - | – | |
| TMHMM | 351 | 370 | 20 | - | – | |
| Phobius | 371 | 381 | 11 | - | – | |
| TMHMM | 377 | 399 | 23 | - | – | |
| Phobius | 382 | 405 | 24 | - | – | |
| PRINTS | 384 | 405 | 22 | 3.0E-27 | ||
| Phobius | 406 | 416 | 11 | - | – | |
| PRINTS | 407 | 419 | 13 | 3.0E-27 | ||
| Phobius | 417 | 438 | 22 | - | – | |
| Phobius | 439 | 443 | 5 | - | – | |
| Phobius | 444 | 468 | 25 | - | – | |
| TMHMM | 446 | 468 | 23 | - | – | |
| Phobius | 469 | 500 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0363500.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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