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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0363500 |
| Transcript ID | LotjaGi5g1v0363500.7 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transporter; TAIR: AT2G43330.1 inositol transporter 1; Swiss-Prot: sp|Q8VZR6|INT1_ARATH Inositol transporter 1; TrEMBL-Plants: tr|I1NJB7|I1NJB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0363500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67834226..67837156) extracted from Lotus japonicus Gifu genome v1.2.
ACTACTACTACTGTACCGTCGTCCATGCCAGGAAGCTCAGGGTATTTGGAGATGTACCCTCAGAGGAAAATTTCCCTCTT CAAGAATCCTTACATTTTGGGCCTCACTGCTGTCGCTAGCATTGGTGGACTCCTCTTTGGCTACGACACAGGTGTTATCT CGGGAGCCCTTCTCTATATCAAAGATGATTTTCAGGAGGTCAGAGACAGTTATTTTCTACAGGTACGTTCAATACTTTTC CCCCTCTTTCAATCTTAACAATGTACTTTACTTTATTTTAATCAGTGTATTCAATTCAAAGGAACTAGTTTTCATATTTG ATATGGTCACGGTCACACTCACACACAACCTAACCTCACTACAAAATGGAATTTGTTGTGGAGAAGTAGCTAGGGTGATC TCACTATAATTTTTTTCTCACTGGATTTTCTAATTGTTTAAGTTGGCAGGAAACAATTGTCAGCATGGCAGTGGCTGGTG CAATTGTTGGGGCAGCAGCAGGTGGTTGGATAAATGATGCTTATGGAAGAAAGAAGGCAACCATCATTGCAGATGTTATC TTTGCACTGGGAGCAATTGTCATGGCTGCTGCACCAGATCCTTATATTCTCATAGTTGGCCGTCTTTTGGTTGGTTTCGG TGTTGGTATAGCTTCTGTTACTGCTCCTGTGTATATTGCAGAGCTGTCACCATCAGAAATAAGGGGGAGCTTAGTAAGCA CTAATGTGCTTATGATCACTGGAGGACAGTTTCTTTCCTATCTCATAAATCTTGCTTTTACACAGGTCAATTTTCCATAT TTGTTTTTATATTAAATAGAGCATTGTTTTGTATCACGTTAAATAAGTTGCTGAACACTAAGGCTGCATTTGGGGTTAAC AACTTAATTAAGTGCTTATTTATAAGTTTATTTGAAAAACTAGTTGAAATATGCTCAGAATAGTTTATTGGTAGATATAA ACGTTTACTCATTAGCGGATTCGAGCAGCTTACGAAAATAGGTCCAAAACAGCTTATAGGTAGGTCATAAGTTATTTTCG TAAGCTTATCCCAACACTTGCATAAGTGTTTATGATGTAAGATAAACTTAAATTAGTTATTTCAAACGCAGACTAATTAT GTCTTGTTTCCTAAATTATATAGACCTCTTATTTGAAATGGTAAAGTTCAGTTTCTCTCATGTGGTTTGGCATGTTATCC TTGTTCCACCTTGTGACGTGAACTTTATACCACACTTCCTTTCACTTTCTCTATTCTCACATATCTAGTGTTTCTTTTTC TCGCCCCCTCATGATTTGGCATGTTTTCATTAATCTGCCTAGCAATGTGAACTTTATTACTCTTCATTTCACTTTGCTTC AATTTCACATAACAGTTGTCTCTTTTTCCTGCCTCCATCCATTTTCTAATGGAATCAATAGATGAACATCTCTTGCAATC TAACTTACTGAAAAAAGGGCAAAGAAATACATAGTTAAATATGGGATTATGCTACCTTTTCAAGGTCAAGGGTGTTATTC CGCTGACCCCTCACATTCTTAATCAAGCAGGTCCCCGGAACATGGCGATGGATGCTGGGAGTTTCAGGTTTGCCTGCAGT AGTTCAGTTTTTCCTCATGCTCTTACTGCCTGAATCCCCCAGATGGCTCTTTATAAAGGTCACAGAATTTTCATAAGCTT ACCTTCAAAGTCTATTTTCTTTAATATAATTTTTTCCTACTTGTTCAGAATAGGGAAGATGAAGCTATTGCCGTGCTTAC TAGGATCTATGACTTTGATCGTTTAGAGGATGAAGTTTCCTCAATTACAACTCAGTTAGAGCAAGACCCCCAAAAAAGGG ATGATATCAGATATTTGGATGTTTTTAAATCAAAAGAAATCAGGCTTGCATTCCTTGCTGGAGGTGGATTGCAGGTAAGA AAAAGTTCACTTGGGATATCATTGTTGGGAAAATAACTTCTCTCTTGCTATTAAAGGATTGATTTGCATAAATATTCTTT TCGTAAACAAGCCATGGTGGCACTGCAAAACTGGATTTCACAACATTACCCTAAAAAACAACTTTTTCATCAATGTATCA GACATAAATAACTTCACTTTCGCCATAATCAATTTTGCCAAAACCAATTTTATCCAAAATCAATTGTGACAAATGATCAA ACATGTAAGAAATGTGTTACTTATAGCATCCCATTTTGTCTGTGAAGGCTTTTCAGCAATTCACAGGTATAAACACAGTG ATGTACTACAGCCCCACCATTGTCCAAATGGCTGGCTTCCACTCTAATGAGTTGGCTCTTCTCCTCTCTCTCATAATTGC CGGCATGAATGCCACCGGAACAATTCTCGGCATATACCTTATTGACCATGCAGGGAGGAAGAAACTAGCTCTATATAGCT TAGGAGGAGTAATAGCATCTCTGATCATCCTCTCCTTTTCATTCTTTAACCAATCATCTGCAAATGGTTTGTATGGATGG TTTGCAGTTTTAGGTTTGGCCCTATATATCTCGTTCTTCTCACCGGGGATGGGGACAGTGCCATGGACAGTAAACTCAGA GATATATCCTCAAAAATACAGAGGAATGTGTGGAGGCATGTCAGCTACTGTGAATTGGGTTTCAAACTTGATTGTGGCTC AGTCGTTTCTGTCACTTGCTGGTGCTGCAGGGGCTGGTTTTACTTTCTTGCTTCTTGCTGTTATAGCTGTGCTTGCCTTT CTTTTTGTGGTTTTGTATGTTCCTGAGACCAAAGGTTTGACATTTGATGAAGTGGAGCTGTTATGGAAGGAGAGAGCTTG GGGCAAGAATCCTGAAACTCTAAGCCTTCTTCAGTCCTAGGAATATATCCAAACCTTAAATACAGTGCACTGTATATGTA TGTTGTTAATTATGCTGTGATTGATTGTTGATGAGAGGTAAGCACAGTTAA
CDS sequence (LotjaGi5g1v0363500.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAGGAAGCTCAGGGTATTTGGAGATGTACCCTCAGAGGAAAATTTCCCTCTTCAAGAATCCTTACATTTTGGGCCT CACTGCTGTCGCTAGCATTGGTGGACTCCTCTTTGGCTACGACACAGGTGTTATCTCGGGAGCCCTTCTCTATATCAAAG ATGATTTTCAGGAGGTCAGAGACAGTTATTTTCTACAGGAAACAATTGTCAGCATGGCAGTGGCTGGTGCAATTGTTGGG GCAGCAGCAGGTGGTTGGATAAATGATGCTTATGGAAGAAAGAAGGCAACCATCATTGCAGATGTTATCTTTGCACTGGG AGCAATTGTCATGGCTGCTGCACCAGATCCTTATATTCTCATAGTTGGCCGTCTTTTGGTTGGTTTCGGTGTTGGTATAG CTTCTGTTACTGCTCCTGTGTATATTGCAGAGCTGTCACCATCAGAAATAAGGGGGAGCTTAGTAAGCACTAATGTGCTT ATGATCACTGGAGGACAGTTTCTTTCCTATCTCATAAATCTTGCTTTTACACAGGTCCCCGGAACATGGCGATGGATGCT GGGAGTTTCAGGTTTGCCTGCAGTAGTTCAGTTTTTCCTCATGCTCTTACTGCCTGAATCCCCCAGATGGCTCTTTATAA AGAATAGGGAAGATGAAGCTATTGCCGTGCTTACTAGGATCTATGACTTTGATCGTTTAGAGGATGAAGTTTCCTCAATT ACAACTCAGTTAGAGCAAGACCCCCAAAAAAGGGATGATATCAGATATTTGGATGTTTTTAAATCAAAAGAAATCAGGCT TGCATTCCTTGCTGGAGGTGGATTGCAGGCTTTTCAGCAATTCACAGGTATAAACACAGTGATGTACTACAGCCCCACCA TTGTCCAAATGGCTGGCTTCCACTCTAATGAGTTGGCTCTTCTCCTCTCTCTCATAATTGCCGGCATGAATGCCACCGGA ACAATTCTCGGCATATACCTTATTGACCATGCAGGGAGGAAGAAACTAGCTCTATATAGCTTAGGAGGAGTAATAGCATC TCTGATCATCCTCTCCTTTTCATTCTTTAACCAATCATCTGCAAATGGTTTGTATGGATGGTTTGCAGTTTTAGGTTTGG CCCTATATATCTCGTTCTTCTCACCGGGGATGGGGACAGTGCCATGGACAGTAAACTCAGAGATATATCCTCAAAAATAC AGAGGAATGTGTGGAGGCATGTCAGCTACTGTGAATTGGGTTTCAAACTTGATTGTGGCTCAGTCGTTTCTGTCACTTGC TGGTGCTGCAGGGGCTGGTTTTACTTTCTTGCTTCTTGCTGTTATAGCTGTGCTTGCCTTTCTTTTTGTGGTTTTGTATG TTCCTGAGACCAAAGGTTTGACATTTGATGAAGTGGAGCTGTTATGGAAGGAGAGAGCTTGGGGCAAGAATCCTGAAACT CTAAGCCTTCTTCAAGGTAAGCACAGTTAA
Protein sequence (LotjaGi5g1v0363500.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPGSSGYLEMYPQRKISLFKNPYILGLTAVASIGGLLFGYDTGVISGALLYIKDDFQEVRDSYFLQETIVSMAVAGAIVG AAAGGWINDAYGRKKATIIADVIFALGAIVMAAAPDPYILIVGRLLVGFGVGIASVTAPVYIAELSPSEIRGSLVSTNVL MITGGQFLSYLINLAFTQVPGTWRWMLGVSGLPAVVQFFLMLLLPESPRWLFIKNREDEAIAVLTRIYDFDRLEDEVSSI TTQLEQDPQKRDDIRYLDVFKSKEIRLAFLAGGGLQAFQQFTGINTVMYYSPTIVQMAGFHSNELALLLSLIIAGMNATG TILGIYLIDHAGRKKLALYSLGGVIASLIILSFSFFNQSSANGLYGWFAVLGLALYISFFSPGMGTVPWTVNSEIYPQKY RGMCGGMSATVNWVSNLIVAQSFLSLAGAAGAGFTFLLLAVIAVLAFLFVVLYVPETKGLTFDEVELLWKERAWGKNPET LSLLQGKHS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | - | – | |
| PANTHER | 2 | 485 | 484 | 2.7E-257 | – | |
| PANTHER | 2 | 485 | 484 | 2.7E-257 | – | |
| TIGRFAM | 19 | 465 | 447 | 1.1E-118 | ||
| Gene3D | 20 | 473 | 454 | 1.8E-132 | – | |
| SUPERFAMILY | 21 | 466 | 446 | 1.31E-72 | ||
| TMHMM | 23 | 45 | 23 | - | – | |
| Phobius | 23 | 52 | 30 | - | – | |
| ProSiteProfiles | 27 | 458 | 432 | 54.594 | ||
| Pfam | 28 | 469 | 442 | 5.3E-119 | ||
| CDD | 30 | 456 | 427 | 8.47418E-168 | – | |
| PRINTS | 35 | 45 | 11 | 2.7E-27 | ||
| Phobius | 53 | 63 | 11 | - | – | |
| Phobius | 64 | 86 | 23 | - | – | |
| TMHMM | 65 | 87 | 23 | - | – | |
| Phobius | 87 | 97 | 11 | - | – | |
| TMHMM | 96 | 115 | 20 | - | – | |
| Phobius | 98 | 115 | 18 | - | – | |
| Phobius | 116 | 120 | 5 | - | – | |
| TMHMM | 120 | 142 | 23 | - | – | |
| PRINTS | 121 | 140 | 20 | 2.7E-27 | ||
| Phobius | 121 | 142 | 22 | - | – | |
| ProSitePatterns | 126 | 151 | 26 | - | ||
| Phobius | 143 | 153 | 11 | - | – | |
| Phobius | 154 | 176 | 23 | - | – | |
| TMHMM | 155 | 177 | 23 | - | – | |
| Phobius | 177 | 181 | 5 | - | – | |
| Phobius | 182 | 204 | 23 | - | – | |
| TMHMM | 182 | 204 | 23 | - | – | |
| Phobius | 205 | 266 | 62 | - | – | |
| Phobius | 267 | 290 | 24 | - | – | |
| PRINTS | 279 | 289 | 11 | 2.7E-27 | ||
| Phobius | 291 | 304 | 14 | - | – | |
| Phobius | 305 | 329 | 25 | - | – | |
| TMHMM | 305 | 327 | 23 | - | – | |
| ProSitePatterns | 324 | 340 | 17 | - | ||
| Phobius | 330 | 335 | 6 | - | – | |
| Phobius | 336 | 356 | 21 | - | – | |
| TMHMM | 337 | 356 | 20 | - | – | |
| Phobius | 357 | 367 | 11 | - | – | |
| TMHMM | 363 | 385 | 23 | - | – | |
| Phobius | 368 | 391 | 24 | - | – | |
| PRINTS | 370 | 391 | 22 | 2.7E-27 | ||
| Phobius | 392 | 402 | 11 | - | – | |
| PRINTS | 393 | 405 | 13 | 2.7E-27 | ||
| Phobius | 403 | 424 | 22 | - | – | |
| Phobius | 425 | 429 | 5 | - | – | |
| Phobius | 430 | 454 | 25 | - | – | |
| TMHMM | 432 | 454 | 23 | - | – | |
| Phobius | 455 | 489 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0363500.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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