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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0365200 |
| Transcript ID | LotjaGi5g1v0365200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Signal peptide peptidase-like protein; TAIR: AT2G43070.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 3; Swiss-Prot: sp|Q53P98|SIPL2_ORYSJ Signal peptide peptidase-like 2; TrEMBL-Plants: tr|A0A072VS87|A0A072VS87_MEDTR Signal peptide peptidase-like protein; Found in the gene: LotjaGi5g1v0365200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67978054..67985394) extracted from Lotus japonicus Gifu genome v1.2.
GGTTTGTAAAATAGAAGAGGATCGAAATGGTTGGTTGGGAATGGGAATGGGAATGGGAATGGGAATGGGAATGGGAGGGT GAGAAGAGTAATTTGGAATAAATAAATAAATAAATAGTGAAACCAGAAACGATTTTCCCGTTTATGCGAGGGAGGGAGAG GCCATTCTCATTGTCAGACCTCAAACAAACAAACAAACAATCAAACAATCAATCATCCCACCCAAAATGATATTGCATTC TCCACACTTGGCGGCCGTCGTCCTTCTCTTCCTCGCGTTTGCCGCGGCCGCCGAGGATGATTCCTGCAATCACACCGTGC AATTGGTAATTTATTTTTGAAATGTGAATGAATGATAGTATATTGATCATGGATTCTATTCTATTCTATTCTGTGGAACT TGAATTGCATTTTCATTTTGAATTCCTTCAGGTCAAGGTCAAGAACTGGGTTGATGGCAAGGAAGGTGACATGTTCAATG CCATGTCTGCAACATTTGGCTCTTATTTGCCTCAGAAACCCGACCAAACTGTCACCGCTCCTGCCCTTTTTCCTAATCCT ACAGACTGCTGTTCCCCTTCAACTTCAAAGGTATAAATAAATAAATAAATAAATAAATACATTAACACAATAAATAAATA AATACTATTACTATGTCTTATCTTATTTATCAAAATAACCACCTTATTCTATTTTTCCAGTTATCAGGATCAGTTGCTCT TTGTCAACGGGGTACTTGTGACTTCACAGCTAAAGCTGCATCCGTGCAGTCAGGAGGTGCTACTGCCATGATCATGATAA ATGAGTCAGAAGATTTATTTGAGATGGAGTGCTCCAACACCACTAGGGAAAATATTTCAATTCCAGTTGTCATGATAACA AAGTCAGCGGGAGAAGCTTTCAACAATTTTTTCAAGTCTGGAACGAGAGTGCAAGTTTTGCTATATGCTCCAACACGCCC AGTTGTAGACTTCTCAGTTGCATTTTTGTGGTTCATGGCTGTTGGAACAGTTATATGCGCTTCACTATGGTCAGATATAA CTGCTGCTCCTGATCATTTTGATTCTCCTAAGGTGCAACCTATACCTGTCTTCAACTTTATCATACATGCTTAAATCTGT TCTTATTTACTTTTTTTTAATTAGCTGCTGAGCATTTCAGTCAGTTAACTATTACAAGTTAGAATGGTGCTATGGAGCAA GTCTTCTTCTGTTCATTTTGTTTACTGAAATTTTAGTTCATTTTTTAATACATCTTCATATGCAAATTAGTTTATACATG TTAAGTTTCTTGTCTTTTGATAGGGATCTTCCAGGGATGAAACAGTGAAAGATGATTCTGATAATGAAATTATCAACATA GATGTAAAGGGTGCCATCATCTTTGTCATTACGGCATCCACTTTCCTTGTGCTACTGTTCTTCTTCATGTCATCTTGGTT TATTTGGGTGCTCATTATACTTTTCTGCATTGGCGGTGTTGAGGTAAGGTAGCTAGTTTTAATGAATTTTACTCCTAAGA GAACAAATATCAGCACAATCACTATCATAAACATACACAACTAAAATAATATAATCCACACAAGATTACTGATAGAAATG GGATGTCATAACTCATAACTACTCACCAGTAAGTTAAAGTCCGCATCTAAGTCTAAGACTATACATGCTCAATCCAATTA TTTGGAAACTGCTTTAACCCATAACTGATTTGCCTTCTATTCAAAACTCTCCTTCTGCAATACAACCAGGCAATGGCTCC ACACGTGCCAGCAAACAACCATAAAAAACACATCTAATTGTGATAAGGCCAGTGGTGAGTGACATCTGAGGTAATAAATA GGTGAACAAAGCAAGATTAAAAGGAAGTAGAAAAGTCTCAAGCAGTCTCCTCCATAAGTTCGCACATAGCCAAACCAGGC TTTTATGCAGGCAATGGACCCATCCAGATTTACTTCCATTGTATAAACCTGTTTATTCGCTCGTGCTTGAATATTGCTGT TTGACATTCACAGAGATTGGAAAACTTCACTACTTCTTGAGTCTGTTTCCTGTTGTATCATTTTTTATTTTCACTTGAAG GATATTTTGTCTGGCCCCTGGATTTACTTTTCCACCTTTATTAAAATCACATCAGACCGTACTTATTCTATTTTTTTTTC TAACTTGTAAGCTGATCTATTTGAAACCTTGATACATGTAAACTGATGACAGGCATTTGGGTTTTGGTTTTTCTTAATTG CTTTAAATTCCTCTTTCCATTAATTGAAGTGTGCTTTCACTTTCAGGGGATGCACAATTGTATTGTAGGCCTCACTTTAA GGTACAATAAGTGTCTTATTTCTTCTAATAAAAAATGAAACTAGTGTTCTTTCTTCATGTTATGTGTCAAATATCTCAAT TCTCATTTATTTTTCAAATATATGAGCAGAAAATGTCCAAATTGTGGTCAGAAGACAGTGAATTTTCCTTTGTTTGGAGA GGTTTCTGTTTTCTCACTAGCTGTGTTAATATTTTGTTTGGCATTTGCCGTAATATGGGCTGCTACTCGGAAGGGATCAT TTTCATGGTTTGGCCAAGATGTTCTTGTAAGTTTCAGTTTCTAGTACCTGTGCAGTAGGTCTTTTGATTATCATTGCAGT TTCTTAATTAAAGCTTTAGAACAGTGAGGCAAACGTTCCAAAGTGTTGTTCATGATGCTTACTATATAAGGTTCAGTCTC TTTTCTGGAAAGTTGTCATTGAATACTAATTCTGATTTGAGGAGCTTAGATGAACACGGGACATTGGTTTTAGGAGTAAA GGCAGAAGTTTCACTGCTTTCTAGTTCTAGGTCTGCCTGTGTTCATTAAGCTTTTGCATGCATTTAACTGCACCCACTTA TCTACACATATACTGATATACACACAATCGTATGGACCGTGCATTGTCAAGGACAAAACTGCTATTTTGTTTGATTCCAT ATAGAGCTTCTGCAGCATTTTACTGAAAAGCAGTTTATTGTCTCAATTATTTCTTATTATTCATGGCTGATTAGCTGTTT AATTAATCTTCTATTGATGTGATTCCCTTGAAATATGACTTTACTTCTTGACAGGGCATCTGTTTGATGATAACAGTCTT GCAATTGGCTCGATTGCCTAATATTAAGGTTACCTGAATGGGTTCCTTTTGTTTATAATAATTGTTCCTTTACTTATTCT GTTTCGATATTTATCATAACTTTTCTGATAATTGGTTTATGCATTTGATATCCTAGGTTGCAACTGTACTCCTTTGTTGT GCATTTGTATATGATATATTTTGGGTATTCATATCTCCAGTGATATTCCAAAAGAGTGTAATGATCACGGTAAGTCTTAT CTTTTGATAGTATTAGTTCATTGCAGTTTGGATCTCAAATATAATTCTCAAATCATATACCCCAACTCATACTGTTCATT TCCTTTCTAATATTTTTTATTTCTTTTGTTTTGGTTCTCTTGTCACAAAATTCATTTAGTATTTGTCACTCATTCATCTT TTTTATAAATACCTAGATTATTTCTTTTTCTTTTTCATTACCGTTGCTGAGTCGAACTTCTTATATTTCTTTCTAAATGT GCCTTGTGTTTTCTCTCTCTGACAGAAGTTATTTATTAGACCTAAGAAAAAAGGTGTCTATAATTGCGGGTTTTCTGTTC TAGGTTGCTCGCGGTGACAAGGCTGGTGGTGAAGCAATTCCTATGCTTTTGAGATTTCCCCGTCCTTCTGATCCTTGGGG TGGCTATGATATGATTGGATTTGGAGATATTCTCTTTCCTGGTTTACTTGTTTCCTTTACTCGTAGGTATTGAATTCCTT GTTTAGTAACAACTTAGATAAATGGAAGATTTATAAAGTTGAAAATAAATGCACTAATAGCTTTGAATAGAATAAAATTC AATGCATATTTGTAATGATAAGCATGGGACCTTTCCATATTTTTAGTTTGGTAAATACTTTCCTTTTGATTTTAAAGCTT CATTACTGGGTAATTTTTCTTTGCCTTAATATCTATAGAACTGGGAGATCTACTACTTGGTTTAAGTTACTTCACTTGTG ACTGAGCATATGAAATAGATGCACTAGTTTGAGTTTTGACAAATATCTTTCATGAAATTGAGTACCCGGCCAGTAATGCT CTGAATGTTTTTACATGTGTCAGTGATAATGATAATAAAAATGACAATGTGAACTTTTCTTCCATGTCTCTATTGTACAT GGAAATGTGCATGCAATATAAAAGGGGGCTATGGTTGGGATAGCAGTATCTAGCTGGAACAGAGGATAAAGTCTAAAAAT ATCTAATTCTTTTCATGCAGCACACATTTGTTTTGTCTTTAAATTTGTTTCACCTTAAAAAAATTCCTAAGTCAGGGAAA AATGAAAATGAATGTTCTATGGAGTGAGTTAAAGTAATTGGATTGAATGTTAGCTGTTATATTTGCTTGCTCTGTGAGCA TGGAAATGCTATGCTCTTGTCCATGACAACGTGAAAATAAATGATGATACCAAGTTTTGATTTCTCTAACATACAACACT AGTTTTCTATGTGCCACTGACATTGATAGTTGATATTACAAGACCTGACACCACAGTAGGATGTGCAATGCTGTGAAGAA GGTGCTGCTGTTAGTTTATTTTTGGGAGATAAGAGATGAAAGGAGAAATATTAGTTTAGAAAAGTGAAGAGAAAATAATT AAGTACCTAAGAAAAGGATCAATGCAAATCAGAACAAAATATAAAAGCACGTCTCAGCAAAGCTTGTGAGTCTTTTTTAA CGTCTAGAAGAGGCCAAGAGGAGCAAGAAAACCACTGCCTCTCCAGATTGGTTTAGGGCTTAGGAATGAGTTACTTGAGT GTGGACTATATAAATGTAAGACCTATATACTTATTGCCTTAAGGTTTTGGGTCTAAGATGTGATGTCACCCCCACTAAAT GCTTCTACTTGAGGGGGAGCTTACCAATGTTGGAACTCACACTTGAGAGATAGAATAATTCAAGTTTGAGTGATGAATTC TTATATTGGTTAGGAGTGGATTAAGTGAGGACTATGATCCATGTACTTATTGCCTCAAGATTTTGTAAAGTATCAATGAT GAAACCTCATATTGGTTAGGAATGAATTGAGGGCTAAATAAGTGTAAAACTCGCGTTCTCATTGAGCGAGGATTATATAA GACTCATATTTATAGCCTTGAAAAGGTTTTAGCTCAAAGTTGTGGTTTCCTAGCTATAGCATAAAATTGTCCTTTAAAAC TCTGATGAACTCCATAGTGTGCGTTTGACATATTTAGTTTTTGATGTATGTGTTATGGCTTTTCTCAGATTCGACAAAGA TAACGACAAGGGGGTCTTAAACGGTTATTTTCTTTACTTGGTAATTGGCTATGGCATCGGTAAGTTCTTTTGCAATATGT GTATTGATAACTACTTCCTCAGTTTCGAAATAGTTGTCATTTTAGATGTTTTGGTTTGTTTCAAATTATCTGTTCTAGGT ATTAATTACTTTGCGCTTCCTTGAAATTCAGAATGATTAATAAATATTGAGAAATGCTAGTAACACACTCTTTTGAGCAC TTTCTCTAGCACACTTTATGTGATTGGTTTATTTCTTGAAAAGTCAACACATTTTTTAAAAAGTGAGACAAAATGTGTTG ACTTTTCAAAAAAATAAATCTATCACATGATGTGTGTAGGAGAAAGTGTTCAAAAGAGTGTGTTTGTTGCACTCATAATT ATTTCAAGGGTTTTTGCTATGCGTGTTTTAGAAGCATTTGATACAGTATATTAAATACTCTTACTTGAAATAAATACATT AAATTATTTTTCTTTTCATTATAATATTTGCTTTCATTTTCATTAAATAGTTTGTACTTTTGTTTCTTTAATCAGTGATT AAAGGGCACTCAGTCAGGATCTGTCTCTTTTCATTACTTATGTGAAACCTTAAACGAGAACTTTTCAATGTTAATTTCCC TCCTAGCAGAGGAAAAATTGTCTGAAAATGAGTTTCATTCGTTTCCTTGTAGTATAAATTTAATTCTAACCATTGGTTGA TTAGAGTTGCTAAGAACAGCCTTATTCTATTAACCTAACGCTTGAATATGCAATAACCCACTGCTTAAGAACTGAAGCAG ATATTCATGATGTCTAGTCCGTGCTAGATGATGTGTATGTTGAACTATGCTACTTGTGTTAACAGTATCCACAATGTCTT GGGTCAATTTATGGCCTTTTGCATCTTGATTAGTCATTTAGTTGAAATTGTTTTAGATTTAAAGATATCATTTCTTAAGG TCCTTCCTCAGAGGATGGTTTCCTGTTTCAGGCCTCTGCTTCACATATTTGGGGCTATATATGATGAACGGTCATGGACA ACCTGCCCTGCTCTACCTTGTTCCATGTACACTAGGTAACTAGTTTTGTGATTTGGATTACATTAACGGATCAATGGTTC CTTATCATTTTAGCTTGTGTCATGCCCTCTCATATTTAAATCCACAGGAGTTGCTGTGATATTGGGATGCATAAGAGGGG AGTTGAAGAAACTTTGGGGTTATAACGAAGACCCGTCATCCAGTCCTGAAGTTTAAATCAGTAAGCTGTTCAAAACAATT GGGGAATGATCTTAGATACATCAACACAATGCTTTGGAAAGATAGCAGGTGTACAGGCGACTCTCCTTGGGCCTCCATGA TTATTTCCATAGTGTGCGTTTGATTTGTAATTTGCATGTGTTCCATAGTTTGCATCGAGAAGCATGTAATTTCTGGATAA AGGGACATTTGGGGGTCCTTCAACAGAAAAACAAATACACTAAGTTCTTGCAAAAGTTATATGGTTCCGTGCAACATTTT TTTTAATAATTAATAGCCACGATTTTGAAAGGGTTGCCAGGAGAATCGGTTATTTAGGTTTGGGGAAAATACTCCAAACA ATCCTCTTTGTGTATTCATCAGCACCCCACTCTTTCTTTGTCTACCATCTATCTATATACTATAGAAAAGAATAACATTG TGAGACTCACTTAGAACACTTGGCATTCCATGACTTACTCTCACCAAACCCCCTTCATTAGATGACAAGTGTCAACCTCT TCTTCATTCAGACCACCTCATTGAAACTCATTTTTCTTGGACTTTTGTTTTAAGGTCCATCATTGACAACTCATTTAATG ATCATTATATATTTCATTAATAATTGATTTTTAAAATCAAATCTCCCTTATGAATTAATCCTTTCTAAATTAAAGCAAGA TAGGCTAGAAATTTATAGTTTCGTTTTTTTTTTCTCCCTTATGAATTAGTTTGCCTTTACT
CDS sequence (LotjaGi5g1v0365200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATATTGCATTCTCCACACTTGGCGGCCGTCGTCCTTCTCTTCCTCGCGTTTGCCGCGGCCGCCGAGGATGATTCCTG CAATCACACCGTGCAATTGGTCAAGGTCAAGAACTGGGTTGATGGCAAGGAAGGTGACATGTTCAATGCCATGTCTGCAA CATTTGGCTCTTATTTGCCTCAGAAACCCGACCAAACTGTCACCGCTCCTGCCCTTTTTCCTAATCCTACAGACTGCTGT TCCCCTTCAACTTCAAAGTTATCAGGATCAGTTGCTCTTTGTCAACGGGGTACTTGTGACTTCACAGCTAAAGCTGCATC CGTGCAGTCAGGAGGTGCTACTGCCATGATCATGATAAATGAGTCAGAAGATTTATTTGAGATGGAGTGCTCCAACACCA CTAGGGAAAATATTTCAATTCCAGTTGTCATGATAACAAAGTCAGCGGGAGAAGCTTTCAACAATTTTTTCAAGTCTGGA ACGAGAGTGCAAGTTTTGCTATATGCTCCAACACGCCCAGTTGTAGACTTCTCAGTTGCATTTTTGTGGTTCATGGCTGT TGGAACAGTTATATGCGCTTCACTATGGTCAGATATAACTGCTGCTCCTGATCATTTTGATTCTCCTAAGGGATCTTCCA GGGATGAAACAGTGAAAGATGATTCTGATAATGAAATTATCAACATAGATGTAAAGGGTGCCATCATCTTTGTCATTACG GCATCCACTTTCCTTGTGCTACTGTTCTTCTTCATGTCATCTTGGTTTATTTGGGTGCTCATTATACTTTTCTGCATTGG CGGTGTTGAGGGGATGCACAATTGTATTGTAGGCCTCACTTTAAGAAAATGTCCAAATTGTGGTCAGAAGACAGTGAATT TTCCTTTGTTTGGAGAGGTTTCTGTTTTCTCACTAGCTGTGTTAATATTTTGTTTGGCATTTGCCGTAATATGGGCTGCT ACTCGGAAGGGATCATTTTCATGGTTTGGCCAAGATGTTCTTGGCATCTGTTTGATGATAACAGTCTTGCAATTGGCTCG ATTGCCTAATATTAAGGTTGCAACTGTACTCCTTTGTTGTGCATTTGTATATGATATATTTTGGGTATTCATATCTCCAG TGATATTCCAAAAGAGTGTAATGATCACGGTTGCTCGCGGTGACAAGGCTGGTGGTGAAGCAATTCCTATGCTTTTGAGA TTTCCCCGTCCTTCTGATCCTTGGGGTGGCTATGATATGATTGGATTTGGAGATATTCTCTTTCCTGGTTTACTTGTTTC CTTTACTCGTAGATTCGACAAAGATAACGACAAGGGGGTCTTAAACGGTTATTTTCTTTACTTGGTAATTGGCTATGGCA TCGGCCTCTGCTTCACATATTTGGGGCTATATATGATGAACGGTCATGGACAACCTGCCCTGCTCTACCTTGTTCCATGT ACACTAGGAGTTGCTGTGATATTGGGATGCATAAGAGGGGAGTTGAAGAAACTTTGGGGTTATAACGAAGACCCGTCATC CAGTCCTGAAGTTTAA
Protein sequence (LotjaGi5g1v0365200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MILHSPHLAAVVLLFLAFAAAAEDDSCNHTVQLVKVKNWVDGKEGDMFNAMSATFGSYLPQKPDQTVTAPALFPNPTDCC SPSTSKLSGSVALCQRGTCDFTAKAASVQSGGATAMIMINESEDLFEMECSNTTRENISIPVVMITKSAGEAFNNFFKSG TRVQVLLYAPTRPVVDFSVAFLWFMAVGTVICASLWSDITAAPDHFDSPKGSSRDETVKDDSDNEIINIDVKGAIIFVIT ASTFLVLLFFFMSSWFIWVLIILFCIGGVEGMHNCIVGLTLRKCPNCGQKTVNFPLFGEVSVFSLAVLIFCLAFAVIWAA TRKGSFSWFGQDVLGICLMITVLQLARLPNIKVATVLLCCAFVYDIFWVFISPVIFQKSVMITVARGDKAGGEAIPMLLR FPRPSDPWGGYDMIGFGDILFPGLLVSFTRRFDKDNDKGVLNGYFLYLVIGYGIGLCFTYLGLYMMNGHGQPALLYLVPC TLGVAVILGCIRGELKKLWGYNEDPSSSPEV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 8 | 18 | 11 | - | – | |
| Phobius | 19 | 22 | 4 | - | – | |
| Phobius | 23 | 176 | 154 | - | – | |
| PANTHER | 28 | 510 | 483 | 1.5E-275 | – | |
| PANTHER | 28 | 510 | 483 | 1.5E-275 | ||
| Gene3D | 31 | 171 | 141 | 2.1E-22 | – | |
| SUPERFAMILY | 47 | 141 | 95 | 6.93E-7 | – | |
| Pfam | 77 | 152 | 76 | 2.3E-11 | ||
| TMHMM | 174 | 196 | 23 | - | – | |
| Phobius | 177 | 196 | 20 | - | – | |
| Phobius | 197 | 233 | 37 | - | – | |
| Pfam | 224 | 503 | 280 | 1.9E-81 | ||
| SMART | 225 | 492 | 268 | 2.6E-85 | ||
| TMHMM | 234 | 251 | 18 | - | – | |
| Phobius | 234 | 251 | 18 | - | – | |
| Phobius | 252 | 256 | 5 | - | – | |
| TMHMM | 255 | 277 | 23 | - | – | |
| Phobius | 257 | 281 | 25 | - | – | |
| Phobius | 282 | 301 | 20 | - | – | |
| TMHMM | 297 | 319 | 23 | - | – | |
| Phobius | 302 | 320 | 19 | - | – | |
| Phobius | 321 | 325 | 5 | - | – | |
| TMHMM | 324 | 346 | 23 | - | – | |
| Phobius | 326 | 346 | 21 | - | – | |
| Phobius | 347 | 352 | 6 | - | – | |
| TMHMM | 353 | 375 | 23 | - | – | |
| Phobius | 353 | 376 | 24 | - | – | |
| Phobius | 377 | 407 | 31 | - | – | |
| TMHMM | 407 | 429 | 23 | - | – | |
| Phobius | 408 | 428 | 21 | - | – | |
| Phobius | 429 | 439 | 11 | - | – | |
| Phobius | 440 | 461 | 22 | - | – | |
| TMHMM | 441 | 463 | 23 | - | – | |
| Phobius | 462 | 472 | 11 | - | – | |
| TMHMM | 473 | 491 | 19 | - | – | |
| Phobius | 473 | 491 | 19 | - | – | |
| Phobius | 492 | 511 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi5g1v0365200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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