Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi6g1v0013100.1

Overview

Field Value
Gene ID LotjaGi6g1v0013100
Transcript ID LotjaGi6g1v0013100.1
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description ATP-dependent RNA helicase, putative; TAIR: AT5G13010.1 RNA helicase family protein; Swiss-Prot: sp|F4K2E9|PRP16_ARATH Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7; TrEMBL-Plants: tr|A0A151SUL8|A0A151SUL8_CAJCA Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16; Found in the gene: LotjaGi6g1v0013100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:2436992..2445912) extracted from Lotus japonicus Gifu genome v1.2.

GTTTGGTGAAAAAGAAAACGAGAAACGAAAAGAGTTAGTTTGTTCGGTTATTCCTAGGTTAGGGTTTTGTCATGACAGAG ACGATGTTAATGTTTGGCGGCGGCGGCGGCGAGGACAGAGTGAAGTTTGTGGCGAGAAAAAGAAAAGTGCGAGAAGATGT TGTTGGTAGACGCAGTTCTGTGTATGATGCTGTTGTTGCGAAGAAGAAATTGTCTCACTGGGAGGACCGACAATTGATTA ATTCAGGTGTTGTTAGAAGAGGTATTCAGACTTGTGAATTTGATGATGATGAAGAAGAACACACAAAGGTTACTCTTCTT GTCCATGATACAAAGCCTCCTTTTCTTGATGGCAGACTTGTTTTCACCAAGCAGGCAGACCCAATAATGCCAATCAAAGA TCCAACCTCTGACATGGCCATAATTTCCTGCAAAGGGTCCAATCTAGTCCGAAAAATCCATGAGAAGCAGAGTATGGATA AATCTCGCAAGCACTTTTGGGAGCTAGCAGGTTCAAAGCTTGGTGATATCTTAGGAGTTGAGAAGACAGCAGAAGAGATG GATGCAGTGGGTCAAGATGGTAAAATCGATTTACCTAAGTTTTCACAGCACTTGAACAAGAGGGAAGAAGCCGTGAGTGA GTTTGCTAAGTCAAAATCCATGTCAGAGCAAAGGCAATACCTGCCAATTTTTTCAGTGCGAGAAGAGTTATTGCAGGTCA TTCGCGAAAATCAGGTCGTGGTAGTGGTTGGAGAAACTGGTTCAGGAAAATCAACCCAATTGGCACAGTATCTTCATGAG GATGGCTATACTGTAGGTGGTGGTATTGTAGGTTGCACGCAGCCGAGGCGTGTGGCAGCTATGAGTGTTGCTAAGAGAGT TAGTGAGGAGATGGAAACCGAGTTGGGTGATCAAGTTGGTTATGCTATCCGTTTTGAAGATGTCACTGGCCCAAATACCA TTATAAAGTACATGACTGATGGGGTACTTCTGCGCGAAACACTCAAAGACTCTGATCTAGACAAATATCGGGTTATTGTC ATGGATGAAGCCCATGAAAGATCATTAAACACAGATGTTCTTTTTGGAATTCTCAAGAAAGTTGTAGCTCAACGTCGCGA TTTCAAGCTAATTGTCACTTCAGCTACCCTCAATGCACAGAAATTTTCAAATTTCTTTGGAAGTGCACCTGTTTTTCATA TTCCTGGGAGAACATTTGATGTGAATACAATATGGAGTAAAACCCCTTGTGAAGACTATGTGGAAGGTGCAGTGAAGCAG GCTATGACTATTCACCTAACCAGCCCTCCAGGTGACATCCTTATCTTCATGACTGGCCAAGATGACATTGAGGCAGCTTG CTATGCCCTTGCTGAAAGAATGGACCAGATCATGGTGTCCTCTTCTTCTTCAAAGAAACAAGTTCCTAAACTATTGATCC TTCCCATATACTCTCAACTCCCTGCTGACTTGCAAGCCAAAATTTTTCAGAAAGCTGAAGATGGAGCCCGAAAATGCATT GTCGCCACTAATATTGCAGAGACATCCTTGACTGTGGACGGCATTCACTATGTCATAGATACAGGCTATGGTAAAATGAA GGTGTATAACCCTAGGTTGGGCATGGACGCTCTCCAAGTCTTCCCAGTTAGCCGTGCTGCTGCGGACCAGCGTGCTGGTC GAGCCGGCAGAACTGGACCCGGTACTTGCTATCGGCTGTATACTGAGAGCGCTTACCTGAATGAGATGCTTCCCAGTCCC GTTCCAGAGATCCAGAGGGCCAACCTCAGCAACGTGATCTTGCTGCTGAAATCCCTCAGAGTTGAAGACGTGCTTGATTT CGATTTCATGGATCCACCCCCGCGAGATAACATCCTCAACTCTATGTACCAGTTGTGGGTGTTGGGAGCCCTGAACAATG TAGGAGGATTAACCGATCTCGGCTGGAAAATGGTCGAGTTTCCACTCGACCCTCCGCTCGCGAAGATGCTTCTGATGGGC GAAAAGCTAGGCTGCCTCGAGGAGGTTCTAACCATCGTCTCGATGCTTTCCGTACCATCCGTTTTCTTCCGACCCAAGGA CCGAGCTGAGGAGAGTGATGCTGCGCGGGAAAGATTTTCCGTTCCGGAATCCGATCATTTGACCCTCTACAACGTTTACC AGCAGTGGAAACAGCATGACTACCGAGGGGATTGGTGCAATGACCACTTTTTACATGTTAAAGGTCTACGAAAGGCTAGA GAGGTTAGATCCCAGCTGCTCGACATCCTCAAGAAGCTTAACATTCCCTTGACCACATGCTTTCCTGATACTGACATTGT CAGAAAAGCGGTTTGTTCCGCCTACTTCCACAACTCGGCCAGATCAAAGGGGGTACGGGAATACATCAACTGCCGGAGTG GGATGCCGTGCCACCTTCACCCCAGCAGCGCTCTATACGGTATGGGTTGCACTCCCGAGTACGTTGTCTATCACGAGTTG GTCCTGACCTCGAAGGAGTACATGCAGTGTACCACAGCAGTGGAGCCCCAGTGGCTGGCCGAACTGGGACCCATGTTTTT CTCTATTAAGGAGTCTGATACATCGTTACTGGAACACAAGAAGAAACAAAATCAGGAGAAAACAAGCATGGAGGAGGAGA TGGAGAATTTGGAGAAGGTACAAGCAGAGGTTGAGAGAAAAAGGAAACAGAAGGAGAAGGAAAAGATGGCTCAGCATCAG CAGCAAATTTCCATGCCAGGTTTAAGAAAGAATTCTTCCACATACATGAGACCAAAGAAGCTTGGTTTGTAAATATGTTG TTATATGTGCTGATTGTAATAAGTTCTTTAGGTTGAAATTGTTGTTGATCTCTATGAGGGATGATATATTTTATGTCTGG TTTTTCAGTCCAATTATCTCATAATATTAAAAATTCCATTTTCAGAAACCTTGGAAGCTATAATGGTGGAAATTTACCCG AGGCCCTTAATTTTAAGGGCATGAGTAACTGGTAAGTTTTGTTCTGTCATTTAACATGTCACTTCTTATTGTTGCTAAGG TTTAATAGAAACGCTGACTAAGGTTTCACCGGGAGACTCTTTATTAAGGAAAGAATACGTTAAGTTATTTCTTTTTCCAT AAGCTTGGGTGAGGTGTCAGATAGAATCCCTGTTCGATTGTTTTTTTTTTTACTGAAATCACTCATAAGTGTTTTTATGT ATGAGGAACTTTTAACAAGTCATCGCTTTTTGATAGGAATAGGTTCATATGAGGATATATTGGTCGTGGACTATAACATA AATGAATCCCTAACTCAACCCATTCATTCATACCAGTGTAGTATAGTGCTTCAAAATTGGATACAAAATATGATCAAAAA AGAAGATAAAAAATTAGAAAGTCATGTCTTTTTTGGCTTTATTCCCACAACACAAACTGCATATGTATGATGTGTTTCCT GTCTTTTAGCTGTGATTTGATGCACCTCCATTTTTCATTTTGCTTTGCACAAAAAAAAAAGGACAATAGGTATTTAAACG ATCTACAAGTGTTTGAATGTACGCTGTCTGTGTTTTCTTTGAATGATGAGATCATCACATAAATTTTCCCTTCTCATGAA TGTGAACGGTATCCTTTACTGGTTTTTCTAATTCTCATCTAGCTTTTCTTTATAAATTCAAATGATGCTCAACAGTCTTC AAGCAAATGATGGGAAGTAATGAGTTATACTTTTACATGTTCATGCAATTATCTGTGCTAAAAATATAATCAGTTTTAAG TTTTTACTAGCTTACTCATTTTCCTATTCTAAAATTTAAACAGATCAATACTTTTCATTTCAGGAATAGACATTTTTATT TATATATTTACTGGTTTTGAAAGTTATTGACTACTTTCGTTTGTCATTCTAAATTGCTAGTTATTCCTAGATATATTTGC ATTAAGTTTGACAGATACTGAATGATAGATCATCAGGATTTCTTGTGTCCATAGAATGGATTTTCATAATTTCTTTAGTC TCAGCTTGAGTTGTGCCTAAAGTTTCTAGCTATACGCTATTCAGTTCATATACATTTTCTGTTGATTTTTGTTTATTGGC ATTTCTATTTAAAATTTGAATCTGATTGTGCTGTGTTTTTTTATTACAAGTGAGTCTAGATCTAGAACTTCTTCTGTTTT GAAATCTCAAATGCCCTTAAGATTTGAGTTTGAAAACTTTACTGTTTGAATGCACTTAGCATGCAAAATCATAGAAGCTC TTGTTATCCTGCCAAGAGTTCTTGCAGTATTGGTACAAAAATGAGCCACTATTAGTAGTTGGTATTACTAGATGCAAATA GAAAATTCTGGGTCCAGCGAATGAATGTAAATATAAACTTAAGGAGAATACAGTCTATACAGAGTTCGTCTCCTTAAGTG GTTGAGCTCCTCTATACAGAACACACAAAGCAGCTGAGGCTTCACTTTGGAGTTGTAGAAAGTAGAAACTCTGCTGGTGG TAGATATTGAGATGAGGTCTGCACATGCTTTAGAGTTTAGACAGAGCTTACCTTTGCTTACCTCTTACACAAGCTCTACA TTTTTTTAAATCATAGATCTAGATTCACTTCTGTGCCTAGTCTTAATTTCAAACTATCCTAAAGTTACTTTTATAGTTTT ATAGAAATTAACTTCATATCACACACTACTGATGAAGTTTGATAATGTACCAAAGAAGAAAGCGAAGATTCAATGTGGTG ATTAAGTAAGTGGGGTTAAGATCCTCTCTTTTTTCCTTGGGAACAATATAAGATCAATTTGGAGAAAGAAAGACAATTCT TCTGCAGATTATTTTTTTGACTCTGGCTCAATAATTGAAGGGTACACCTGTCCTTCTACAATGTTTTTTATCTAGAAAGT GGTGACTGAGGGTTAGTGTCCCACAATTCAGTAGGTTGGTTGGTGCTCAATGGAATTTCAGCAATAGAAAGGGAGCTGGT CATGTTGTGATTGAACACATGGTGGCTAATGTAGGAATTAAGAACTAAGAAGGAAATTAAGAGATTAATTATGTATATGT GGAAACGAAATAGAAAATCCATTTTCATTATTTTTCTTCTTCAAGCTATCTTTTGCTCTTGTATTAGATAAGCATTATAG GTGGTTGGAAAATTTTCCAATTCCAATGGGACTCATCATTGAGTTTTGCGTTTTCTAAATTGTGATTGCATATTTTCTCA CTCACTCAAAGTCAAAGTGGATGAAACTTTCCAATTTTCAGATCTGATCGAAACCTTTCCTGAGGTTCCAAGGATATCAG TTTCATTCACCATAGCAGTCCCTTGGGTAAGAAAATGTAGGTGGTGGTGCTGTTTCATTCTAAGATGTTTTTGTTTTATG TGCCTAATGTCCTGATCTTTTGATACCAATTTTCAGAAATAAGAGAGGGAAGCCAATAATTATTGACCCAAGGCTTTATG CGTGTATAGTCTTAGAGGTATTTTAGTGATAACTTAATGTTCAAGCATTTTGTTGAGATGTACTATTTAATTTCAACACT GATGGAATTTAATTTCCCAGCACAGTATGACCTTGCTCCCCTGTGGCTTATCTACTTCAATGCTCAGAGGGGAACTGGTG CGAGAAGGCGCTATGCTAGCTAGAGTGCAAGCAAAGGCGGTCAAGTATAATTAATTAATCTTCCTTTGATGCTGCTATGA ATTAAGTATGAAGGGCTTCACCTTCAATAGTAGAAATTCTCACATGTCTCCATGAAATAACTTGCAGAAGGGGAACCATT CTCTTTTCTGAGACTCTGAGTGATATATGTTATGCTTAGCTTTTTATCAAATATTGTATTGTGTATTATCTCTTTCTATC TAACAAAAAGCTCTTGAATCAGATCTCCCTCCTAACCCTCATCTTTTTTTTATCTCTTCTCCCTCTCTCAGACACTAAAT ATTTTTCTCCCATGAAGCACATGCACTATCAAAGGCTACAACTTTGTCGTTGTCACCCACCCTCATTCCACCTTTTCCTT CCTTCTTTCAATACCTCTATATCTGGAATAAACGCTAAGTCATCTCCTTCCCTCAATCTATCTTCTCCTGATTCAGATCT CCTCCTCTTTTTTCACATCTTTTAATCGATTTCCGTAATTTTCTCCATTTTCATTATCCTACCTCTTCTTCATTTGGATT ACAGTGACTGCAGTATGTGGTCTGATACTCCATCTTCTTACTTTCATTTTAATTATTCGTTAATTTTGTGTGACAGAACT TATCATCTCTGTGGCGGACGTCGGAAATTTGTCGACTTCAGAAATCAAGCATTTGTAAGTCATTATGTGTCGCGTGGAGT TGTTTCCATGGTTTTTTAGTTTCCATTTTTTGTTTTTTCCTTGTGAACACTTAATTAACCACTGAAAAAGAGAAATCGTA CAAGAGAAAGAGAAGGTTAAAACTTCTTTTTGAATTGACTGAGATCTGAAGAAATGGAGCAACCACTATCAAGGTCATGA AGCATGCCGAGATATTTTAGAGCCTCATCTCCGGAGTCCATGAAGGTAGCTGCTTAATTAATAACAAGCCTTACATGGGA ACAAAATCACACATTGAAATTAAATGGTGTGCAATTAAATGCACCTGAATCAATACAAATGATTACTTGATATTTTGAAT ATGACAACCCAGTAATCTCTAATTTTGGCAGGTAATTTGTGGCAAGGAAATATCTTCACTTTTTAATAGCAGCTCAGGTG CTATCATTATGATTTGAACAGTTTCACTAATTCTGGCATGAGTGGCATCTAATCTTTGTTTCCATCCATCATTCTATGTT GCAGGGTAGAGAATTAAGAAATGCAATTGAGAGTCTAGAGCTAACTGGTCGTGATGCTGAGGCTTTGAGCAAGCTCAGGC ATAAATTAGAAGATGGGGCATTCCCGATCTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTACCTATTTTAATTC TGAAATGTTGCATATTTATCAAGAACACTTCAAATAATCACACTGATCTGGTTTTTGAATTGGATACTATGATGAAAAGA GGACCTATTTCCTTGATAGCATATTTACTGCAAGTTCAACAATTGAGAGTCAAGCATGTTTTGTAAATGGGATTCGCATC TAATTCCTTTTCTACATCATTTTCTCAAAATATTAAAAGCTTACAAACCATTTTTCAATATGCTTTCTCTCTTTGTTATC GTCTTCGTTTGTAGGCTCTTATGGGTGCTATTTGAAACCTTAATTGATTGGTTTTGTTTCTTATACATGGGATCTTAGGA CCCATGTTTTTGTCTATTAAGGAGTCTGATACATGTTATACTGGAACATAAGAAGAAACAAGAAAACAGCCATGGAGGAG GAGATGGAGAATTTGAAGAAGGTACAAGCAGAGGTTGAGAGAAAAAGGAAACAGAAGGAGAAGGAAAAGATGGCTCAGCA TCAGCAGCAAACTTCCGTGCCAGGTTTAAGAAAGGGTTCTTCCACATACTTGAGACCAAAGAAGCTTGGTTTGTAAATTA TGTTGTATATTACTTTGATTTGATATGTTGAGAGAGGGAGGGGGAGGGAAAAGCCTACGCACTGATAATTCGGTAAAAAG TGTAAATTGTTGATTCGTTCTCCAGGTTGAAATTGTTGATCTCTATGAGGGATGGTCTCTTCATATCTGTTTTTTCAGTC GAATCATCTCATAATATTAAAACTTTCATTTTCAGAAATCTTGGAATCTACAATGGTGGAAATTTGCCGGAGGCCTTAAT TTTAAGGGCATGAGTAACTGGTGAGTTTGGCTCTGTCATGTAGCATGTTACTTCTTATTGTTGTTAAGGGATATCATTGT GCTTTGCTAAAGGTTTAATAGAAAAGCTGACCAAGATTTCACCAGATAATTTTTATTAAGGGAAGAATAGGTTAAGTTGT TTCTTGACCTGCAAGCTTGGGTGAGGTTGTCATTTTATAGCGCTTTATTTTGTCATTTTGAAGTGCTTGAGCGCCTTCAC AAGCGTTTTTGCATCTTACAGAATGCGCTCTAAATGATCATCATCAAAACATTCTGTCACTACTGATACACATTTTAAAG CCGTTTTGTATATGGAGTATGGACACAGACTACAACGATTTAAATAAAAGCGATTTAAATAAAAGCGCTGTAAAGTGGTA AGACACATTTAGCATACAAAATAGTAGGGGTGTTCGTGGGACGGGTTCGACTAGACTTTTAGACGGTCCTAAATGTTAAT TGGGTCAGTTTTTAAACCAGAACCCGTCCCTAGACCCGAAGAGATTCGATAGGTAAGGATTCAACTTAGATCAGGTCACA AAAACATTTGGATTGGCCCGAAGGACAAATTCAATTTAAATTTCAAATTTCTAAGTGTTTCCTTTGGTCTTTCTAGAATC CTTTTATTTGAAAAAACAAGCTGATCATGTTACTTTTATTTCAGGGAGGACGAATTCATGCTTTAGAATGTACATTTAAA AGCAGCTCTTTTCGTTTGGGCTTAGAGTTTTCTTCTGTGGGTAATTTAGAGTTCTAATCTTTTTTTTTATTGTGTATACT GGTCAAATATTTAGAAGAACCAATAGAGTTTTCATACTTTGTTCTACCCCTCTTATTAATAAGCATAGCAACTATGCTTG AGTCCCTCCATGATTTTTGCTTCTTCTTGAATTAAGTGCAATTTGTTGTTCACTTAGGGTAGTTTTGAGCTTCAATTGAT GCCAGCCTTTTTCTATATGCAAGTTGGCTTCCCTTATCCGAATAGGTCTCTCAAGTCTTCCAGCACCATCTGAAGCATTA TTTTGTGTACTTCTGGTGAACAGTATTGTCAACATGTTAACAATGAGATAAATAAAATGTTTACTTCAAATAGTGAATTT ATGGTTTATGAATTTGTTCTCAGCCTCAAATCCATAATTTA 

CDS sequence (LotjaGi6g1v0013100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACAGAGACGATGTTAATGTTTGGCGGCGGCGGCGGCGAGGACAGAGTGAAGTTTGTGGCGAGAAAAAGAAAAGTGCG AGAAGATGTTGTTGGTAGACGCAGTTCTGTGTATGATGCTGTTGTTGCGAAGAAGAAATTGTCTCACTGGGAGGACCGAC AATTGATTAATTCAGGTGTTGTTAGAAGAGGTATTCAGACTTGTGAATTTGATGATGATGAAGAAGAACACACAAAGGTT ACTCTTCTTGTCCATGATACAAAGCCTCCTTTTCTTGATGGCAGACTTGTTTTCACCAAGCAGGCAGACCCAATAATGCC AATCAAAGATCCAACCTCTGACATGGCCATAATTTCCTGCAAAGGGTCCAATCTAGTCCGAAAAATCCATGAGAAGCAGA GTATGGATAAATCTCGCAAGCACTTTTGGGAGCTAGCAGGTTCAAAGCTTGGTGATATCTTAGGAGTTGAGAAGACAGCA GAAGAGATGGATGCAGTGGGTCAAGATGGTAAAATCGATTTACCTAAGTTTTCACAGCACTTGAACAAGAGGGAAGAAGC CGTGAGTGAGTTTGCTAAGTCAAAATCCATGTCAGAGCAAAGGCAATACCTGCCAATTTTTTCAGTGCGAGAAGAGTTAT TGCAGGTCATTCGCGAAAATCAGGTCGTGGTAGTGGTTGGAGAAACTGGTTCAGGAAAATCAACCCAATTGGCACAGTAT CTTCATGAGGATGGCTATACTGTAGGTGGTGGTATTGTAGGTTGCACGCAGCCGAGGCGTGTGGCAGCTATGAGTGTTGC TAAGAGAGTTAGTGAGGAGATGGAAACCGAGTTGGGTGATCAAGTTGGTTATGCTATCCGTTTTGAAGATGTCACTGGCC CAAATACCATTATAAAGTACATGACTGATGGGGTACTTCTGCGCGAAACACTCAAAGACTCTGATCTAGACAAATATCGG GTTATTGTCATGGATGAAGCCCATGAAAGATCATTAAACACAGATGTTCTTTTTGGAATTCTCAAGAAAGTTGTAGCTCA ACGTCGCGATTTCAAGCTAATTGTCACTTCAGCTACCCTCAATGCACAGAAATTTTCAAATTTCTTTGGAAGTGCACCTG TTTTTCATATTCCTGGGAGAACATTTGATGTGAATACAATATGGAGTAAAACCCCTTGTGAAGACTATGTGGAAGGTGCA GTGAAGCAGGCTATGACTATTCACCTAACCAGCCCTCCAGGTGACATCCTTATCTTCATGACTGGCCAAGATGACATTGA GGCAGCTTGCTATGCCCTTGCTGAAAGAATGGACCAGATCATGGTGTCCTCTTCTTCTTCAAAGAAACAAGTTCCTAAAC TATTGATCCTTCCCATATACTCTCAACTCCCTGCTGACTTGCAAGCCAAAATTTTTCAGAAAGCTGAAGATGGAGCCCGA AAATGCATTGTCGCCACTAATATTGCAGAGACATCCTTGACTGTGGACGGCATTCACTATGTCATAGATACAGGCTATGG TAAAATGAAGGTGTATAACCCTAGGTTGGGCATGGACGCTCTCCAAGTCTTCCCAGTTAGCCGTGCTGCTGCGGACCAGC GTGCTGGTCGAGCCGGCAGAACTGGACCCGGTACTTGCTATCGGCTGTATACTGAGAGCGCTTACCTGAATGAGATGCTT CCCAGTCCCGTTCCAGAGATCCAGAGGGCCAACCTCAGCAACGTGATCTTGCTGCTGAAATCCCTCAGAGTTGAAGACGT GCTTGATTTCGATTTCATGGATCCACCCCCGCGAGATAACATCCTCAACTCTATGTACCAGTTGTGGGTGTTGGGAGCCC TGAACAATGTAGGAGGATTAACCGATCTCGGCTGGAAAATGGTCGAGTTTCCACTCGACCCTCCGCTCGCGAAGATGCTT CTGATGGGCGAAAAGCTAGGCTGCCTCGAGGAGGTTCTAACCATCGTCTCGATGCTTTCCGTACCATCCGTTTTCTTCCG ACCCAAGGACCGAGCTGAGGAGAGTGATGCTGCGCGGGAAAGATTTTCCGTTCCGGAATCCGATCATTTGACCCTCTACA ACGTTTACCAGCAGTGGAAACAGCATGACTACCGAGGGGATTGGTGCAATGACCACTTTTTACATGTTAAAGGTCTACGA AAGGCTAGAGAGGTTAGATCCCAGCTGCTCGACATCCTCAAGAAGCTTAACATTCCCTTGACCACATGCTTTCCTGATAC TGACATTGTCAGAAAAGCGGTTTGTTCCGCCTACTTCCACAACTCGGCCAGATCAAAGGGGGTACGGGAATACATCAACT GCCGGAGTGGGATGCCGTGCCACCTTCACCCCAGCAGCGCTCTATACGGTATGGGTTGCACTCCCGAGTACGTTGTCTAT CACGAGTTGGTCCTGACCTCGAAGGAGTACATGCAGTGTACCACAGCAGTGGAGCCCCAGTGGCTGGCCGAACTGGGACC CATGTTTTTCTCTATTAAGGAGTCTGATACATCGTTACTGGAACACAAGAAGAAACAAAATCAGGAGAAAACAAGCATGG AGGAGGAGATGGAGAATTTGGAGAAGGTACAAGCAGAGGTTGAGAGAAAAAGGAAACAGAAGGAGAAGGAAAAGATGGCT CAGCATCAGCAGCAAATTTCCATGCCAGAAACCTTGGAAGCTATAATGGTGGAAATTTACCCGAGGCCCTTAATTTTAAG GGCATGA 

Protein sequence (LotjaGi6g1v0013100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTETMLMFGGGGGEDRVKFVARKRKVREDVVGRRSSVYDAVVAKKKLSHWEDRQLINSGVVRRGIQTCEFDDDEEEHTKV TLLVHDTKPPFLDGRLVFTKQADPIMPIKDPTSDMAIISCKGSNLVRKIHEKQSMDKSRKHFWELAGSKLGDILGVEKTA EEMDAVGQDGKIDLPKFSQHLNKREEAVSEFAKSKSMSEQRQYLPIFSVREELLQVIRENQVVVVVGETGSGKSTQLAQY LHEDGYTVGGGIVGCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETLKDSDLDKYR VIVMDEAHERSLNTDVLFGILKKVVAQRRDFKLIVTSATLNAQKFSNFFGSAPVFHIPGRTFDVNTIWSKTPCEDYVEGA VKQAMTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVSSSSSKKQVPKLLILPIYSQLPADLQAKIFQKAEDGAR KCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEML PSPVPEIQRANLSNVILLLKSLRVEDVLDFDFMDPPPRDNILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKML LMGEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLR KAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHNSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVY HELVLTSKEYMQCTTAVEPQWLAELGPMFFSIKESDTSLLEHKKKQNQEKTSMEEEMENLEKVQAEVERKRKQKEKEKMA QHQQQISMPETLEAIMVEIYPRPLILRA 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 146 855 710 8.8E-280
PANTHER 146 855 710 8.8E-280
Gene3D 158 380 223 3.7E-88
SUPERFAMILY 195 753 559 2.74E-127
SMART 202 387 186 3.1E-31
CDD 204 377 174 4.84885E-114
Pfam 209 364 156 2.1E-7
ProSiteProfiles 214 378 165 18.84
Gene3D 381 561 181 1.7E-66
CDD 392 550 159 5.31589E-72
ProSiteProfiles 400 583 184 16.639
Pfam 408 542 135 2.4E-13
SMART 438 542 105 4.7E-17
Gene3D 585 694 110 2.0E-29
SMART 603 693 91 8.0E-35
Pfam 606 692 87 4.6E-22
Pfam 750 827 78 4.4E-16
MobiDBLite 842 881 40 -
MobiDBLite 842 885 44 -
Coils 843 885 43 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Molecular function Helicase activity Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0013100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…