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LotjaGi6g1v0015400.1

Overview

Field Value
Gene ID LotjaGi6g1v0015400
Transcript ID LotjaGi6g1v0015400.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Pentatricopeptide repeat-containing protein, putative; TAIR: AT5G04810.1 pentatricopeptide (PPR) repeat-containing protein; Swiss-Prot: sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810, chloroplastic; TrEMBL-Plants: tr|A0A072VGX7|A0A072VGX7_MEDTR Pentatricopeptide (PPR) repeat protein; Found in the gene: LotjaGi6g1v0015400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:2728790..2739084) extracted from Lotus japonicus Gifu genome v1.2.

ATCCGATTTTACTCTCAAAACGTGGATCTAATTGAGCCTTCCCAAACATGTTTTGAGACATGGAGATCCACGTTTAAGAC TTTGATCCAATTTTGGGACTCAGATCCACGTTTTGGATCCGCAACCAAACACACACTTACTCTCTGTTTGGATGTGAAAT GAAAATGAGAGGAAAGAAAATGAATGGAAAGTAAAGATGATGGAGAAGAGAAAATGAAAGGATTTGCCCCAATCAATCAG CATTCCAAATCATCACTCACCGGGCTCCGACAAGGATCTACTCCAAACGATTTACAAAGAAAATGAGTTTTTTCAACAAT TTTTCCGACGTAGAATCTAGGTCAAACGGCGAACAATTTTTTTTTTGATGCGGTCCCGAACTGAGGGTTCGATCAGTAGA GGGGACGACTTTGCCTCCCCGGAAGAAGAAGGGACCCGTTCTCTAGCCGACTGGTGGCGGGAGAGGATTGGGTTGCAACA AATATCCGGATTGTTATTTCGGTTATGTCAAACTACACTTGACTGGAGAGTGGAGAGTAGCGAGGAGAGGTTGTGAATAA TGGAAGCTTTCTGTTTCTCATTCCCCACCTCACACTTATCCATTCCCCCCAAACACCACTCTTCCTCCGCCACCACCACC ACCGTTTCCTCCTCCCTCAAACCGCCGCCGGACTCCAACAACTCCGCCGCTCCCTTCCGCCGCCCCCTCAAAACCACCAC CACTCCTCCCTCCAATCCTAAACCCACACCAAAACCTAAACCCAAACCCGCCCCAACTTCAAACCCTCTCAAAAATCCCT TCAAATCCTCTCATGCCCTCACCAACAAGCTCTGGCTCACTAGTAAACTCTCTCCTCCTCCTCCTCCACCACCACCACCG CCACCACCACCGTTACCACCACCGGAACGAGAAACTGAAATCGCCGAAGACAAGGGCGCTGATGACGTAAACCGGTTCCG GCAACCGGGGAAAATCTTCGTCGGGAACTTGCCAGTGTGGGTGAAGAAACCCGAGGTCTCCGAGTTCTTTCGCCAGTTTG GCCCGATACGCAGCGTGATTTTGATCAAAGGTCACCACGAGACGGAGAGGAGCGCGGGGTTCGGGTTTGTCATCTACGAC GGGGAGACGGCGGAGAATTCGGCCATGAAGGCGGTGGAGTTCGACGGCATTGAGTTCCACGGGAGAGTGTTGACGGTGAA GCTGGACGATGGGAAGAGGTTGAGGGAGAAGTCGCGGGAGAGGGAAAGGTGGTTGGAGGGGAATGATGATAAGGAGGAGT ACAGGTCCACGTGGCATGAGGAGAGGGATGGTTCCAGGAAGGAGTTCCAGAAGGTTCTGGAGACTGAACCGGAGAATTGG CAGGCCGTTGTTCGCGCTTTCGAGAGAGTTAAGAAGGTTGATCTTCTTAACTTTTTACTTGTAGTGTGTATATATGATTA TAATGCTGTGTTTCTAACAATTGTATGGCTTAATTTTGAGGGATTGGGTTGGGGTTATGAAAAATACATGGATAAGTTTA TTTGAGAATTGAAGAATTCGACAATGAAATTTGCGCCTGTGATGAGACGGGTTTCATCTTCAATTTGAATTGGAAGGTAT AAAAAGTTAAATTGTTCTTTAATAACATGTGGATGTGGCGTACTCAGTGTCATCAGGTTAAAATGTCATTAATTAGTAAT GTATGCTGTTTATTCTTCTTTAAACATGTTTAATGATGTTGGCTTGAAGTTTTTCTCAGTATTTAGTGATGATTGTTGTC ATCTTTTGGCCAGTTTGTTGATCTAGCATGGGTTTTGGGGCTTTTTATGAGTTAAGGCTAGTATCTATGTTATATTACCC ATGCCTGATTTTTTCTCTGCATTCGCTGATGATTATTGACATCAATTATGTTTTTAGGAGAATTTCTTATCCTTATCCTG GATGTTTGCTTTCTCTGTTTTGTTTAATTCTATCCGGTAATATGAAAATGGTGGTATGTATGTTATTTCTGCATACATAA AGATGGTTGCATGAAAAGTTTTAATGTGCACTCGTGAGTTGGTTTCACCTTTTGTCCTTAATTTTTTCAGCCTGCCAGAA AAGAATATGGGCTGATGATAAAATATTATGCACGACGAGGGGACATGCATCATGCACGTCAAACATTTGAGAGCATGCGA GCGAGAGGAATAGAGCCATCTTCACATGTGTACAGTAGGTAAAATCATTAAACGAGATACTGCTTTGAGCTTTGGTTTAA TTTTAATATGTACTTCTGCTTTTCAGCAGATGCCACATTTTGACAGGCATGTGTTAACCTGTCAGAGATGTACATGTGAG TCAAGTGATTTGTCTTTCCAAATTATTGATTGAGAAAGAAAGTATATTTTTTATTTGACTGTTTAGTTTAGTTTCTGTTA TTCAAATTGTTTTATGTTAGAACCAGAAATACATAAAGGGAAAGAGAAAGGAGAAACAGGGAGAGAAGAGGGAAACAGGG GAAGTGAGAACTCAATATCTTCAATATCATTCTACATTACAATTACAGGGACTGACTCTTACTTATATAGCCACAAGGAA CTAACCCCCTAACCGACTCAACTGACTAATGGAATTCTCTATTAAGTTAGTTTTACAATTGGTTCCAATTAATTTTTTTT AGGTTTCTGACTTTCTGTTACTTTTAAGTTTTTACTCTTCAAATTAAGTTCTCTATTGAGTTTGAAAAATAGCTCCACTT CATTTTTTTCCTCTATGCTTTTGAACTTATGTTGATGTAATATGTGATGGTTATGTTTTAATGTTTGGATCAGATGGCGC AGAAAATGTGTATTTAATGTAATATTTTACTCTAACTACTGATATCAGCAATGTAATAGAGATTTACGAGAACCAAATGA AAAAGATACACTAACACACATTTGAGAAGCCCTAATCTCTCCTATCCACTCCTTAGTTTGTTCATCCTTACCTTATTTCT ATTCTGTTCTCTCTTTCTATATTTATCTACCGCTTCAAACAAATTTTCACTCTAATTGACCCTATGGCCACACTGGCCAT TAGTTGTCCCCAGTGATTCTAAATCTCTTGCTCACCTTGGGCTCTGATCTCTAACAACAATTCCTCACATGCACCTTCAT ATATTGCCTATCAAAAAAAAAAAAAAACATGCACCTTCATAATACGAGATTTCTTAAAATTCCATTACAGTTTCTGGACA AGTCATTTGGTAAATATTTAAGGAAAATAGCGTATCCCCTTCTATTTGCAGTCTTTCTTTTACTCATTGATTTCTTCTTA ATACTATAAAAAGCACTATGGTTATACTTTCTACTAACTTTGATAATTAATACATGTTAAATGTTTGCAGTCTTATTCAT GCTTATGCAGTTGGTAGAGATATGGAAGAAGCTTTACATTGTGTTAAAAAGATGAAGGAAGAGGGCATTGAAATGAGTAT AGTGACATACAGTATTGTTGTCGGGGGATTTGCTAAAGTGGCCAATGCTGAGTAAGTAAACTGACAAATTTCCACCATGG CTATATCTTTTATAAAGAACATTGGTTCTGGTTATTAGTTTATTTTTTTGTTTGTCAAAGATTTCACTTTTAATTGCATT AGCTGTTCGGTTTATGTGTTCAAAGTTATAGACCGTAGTGTTTTAGGTATGGAGGTTAAAACCATGCTCTTAAAAATAAA ATAAAAATAGTGATATTGATGTGAATGATATGTTTGATGTCACCAAGGTTGTCAACGCATAATTGTAACACAGATTGTAG GATCCTATCTAAGACACAAAATTATGTTTAAAACAACACAGAAATGACCTTGAAAAGCTAGATAACATAAGAAAAATAAC CTTGAAATCACAATTAAGTTGTGGTGTAAATAACATAAATAGTTTTATATTATATTTGAAAAACTTACTATCTGATAGAC TAATGTCATGTCATGAACCTACTATCTGAAAAACTTAAGTTGTGGTGTACTGCAATTGATACAGATAAACTACATCCCTT CCAACTATATAGAATGAGAGTATATCTGCCATTGATAACTACATCCCTTATTTGCATTTGTCTCATTCTCTTTTTTCACA AGAACATGGTAAACTATGTAGTTGCATCACTACGGATCTCACTTGGTCTTCTCACTCCCAAGTCCTAACTCCCAAAATGT GAAGTGTACTGCAATGATTGGTTTTGGTGCCTTTCTCTTATTAAGGGATTGGATTAACTTCGAACTTTCTCATTTGTTCT TGTATTTCGTTTATAAATAACCCCACTTTCATGTATTCTGTCTTTTTTTCTAGTGCTGGTGTAAAACATTTGGTCCAGTT TGATATAAGAATATAATTTTGAGGCCTTGTTCATAAACGAGTGAAGATTGAAGCATCAGTTTTGTATCCTGGAGATAACA TTTATTTGATGTTGTTTTGGAAGTGGTGCAGATCACTGGTTTAAGGAGGCCAAAGAGAAGCTTCCATCTTTAAATGCAGT CATTTATGGGAGCATAATTTATGCACACTGGTGAGCATTCAGACTTATTTCATGGCATCAGTTTTATACGTATGATACAA AATCTTTGATAGGCAGGGAAGTTAAAATAAACTAATCTACATAGCAATGTTTACCAAGAAGAAACATATACTATTCAAGT TGTTAATTATATCAGTATTTGGTTATCTATTCGCTAGTGTGGTTCATGTATGTATCTTATAGTTATTGTTACTCAGGCTT CTGTTTCTGAAAGTATCCCAGTTTTTCTTTATTGTCAAATGATTATCATTTCTATTCAATCCCCCCCCCCCCCACGCACA CCCTTTTCATGTATAGTTTTTGATATCCTGATGTATTTTATAGTCAAACTTGCAATATGAAGCGAGCAGAAGCCTTGGTG AGGGAGATGGAAGAACAAGGGATAGATGCTCCCATTGACATATATCATACCATGATGGATGGTTATACAATGATTGGCAA TGAAAATAAATGCTTAATCGTGTTTGAAAGACTTAAGGTATGGCTTGTTCATATTTCTTTTTTTGGGTGCGACGATTGGC TTTGTAATTTTGATATGCTATGTGCTTTCATCAATTATATATCTTAATAGAAAATGTCTCAGTCCATAAGAAAATCATAT AACAATGAGGACTTTAGCATAATTTCTAAATAAAAATTCCTTTCGTATGTAAGATTCTCTTTGGAAGAGCAAAGCTTTTT GCTGGTACTCTAGGTTTCCTTTTGATCATTGTATCATCATTGAACTTTCTTGCAACTTTTCATGTCATACGTATAATAGA ATATTTCTTTCTGTAAATTCTTCTAAACATTTACAATCTTATGAAAAATTCCCTTCTCTAGTTATCAGATTTCTTCCCTT TTAAGCGATTTTTTTACTCATAAAAAATTCAATAGAACTTGAGCAAATTGTTCCATGTTCCTACTCTAGTCCGAAACTGT TCCAATTTTGCAGAAGCTTACTTTTACTAAGTTCTTGCCCTTTTGTTAGAATGTTCTGGTTTAGCTAAGGCATGTACCTG TTATATAACATTAGTAATCAACCTAGAATATTAGTAAGAAACGATGTGTTAGTTTGCTGTTTTATATAAGATATATTTTT TAAAAGTTCGTATCATCACATGAATACTATTTTGTCTCTGTCTCTTCTATCTTTTACCTATACCTTCAACGTGTTATCCT AGTGGCACCATTCTTCATTTCTTGACCTCTGATGAGTTCCCAAATATCTAGAACTCATTTTGTCTAACCTTCCCCTCCCA TGGCATCTTTGTCCTGTGACTCTCCCTCTTTGTATTTTGACTTTGGTAACTGGAATATTTTTCTCCTACCCATGGCGTTG TAGACCCTTAAAACTAACATTTGTGGTTGTATTCACATCCTCACCATGATTCCCTCACTCTGCAGCTATCATCTCCATCT TTCAGCCTCTGCAGTATCCAAATCCAATTGTTAAGACTTCATTTCGTTCACTTTTTATTCCTATTAGAATTTGGGAGGCC TAACTCAACCCAAAAGCTAGCTCCGGAGTTGAGGATTACCTTCTCATATATGAGGGCTATCTGGGCCATATCTCTAGTCA ATGTGGGACAACTCAACACACCCCCTCATGCGTAGGGCTAGACATCTGGAGCTTGGGATATGCAGGAATGAACATCTACG AGTAGCCCATATACATGTGGGCTCCTCTTAATGGATCTAGGATAGACTCTGATACCAACTTGAATGAAATATTCTGATTA ATTGTATGCATCCCTATTTATCCTAAAATGGCAATCACCTAAAATAGGAAAAGATAAAATAATCCTATTCTAATTAAAGT AATAAAGATAAAATGTACCAAACATATTTACTCCCTATTCTAATAGGCCTCCCTAGGGTTTGGTGTTATATTTGTGATTT TTTTTTTGAGAAAATAATAAACAATATCCATTTAATTATTACATGCTTCAAGTGTATAACATCTTTGTATACTTCTTGAT TCTTAGGACAGTAGTCTTTGTTTATGTTTGAAATTTGTACTTTTTTCCCCCTAATTTGGCATTTAATACGTTGCTGAATA GTCACCCTGATATATTTCGACGTCATATATAAAAAAATTGTGCACTATTGCGCTTGACTTGACATTGAATGACACAGTAA CATCTCTTTGTTCTGATGAAGGAATGTGGTTTCTCTCCCTCAGTTGTCACCTATGGGTGTCTTATTAACCTTTACACCAA GGTGAGACATATTTCATGTTTTACATTAATTGGCCTATTTATGTTATCTAGTTCATCTATCTCTTTCAGCAGTTATTTGA TTGAGCACTTTTTAGGATTTATTGCCATACATCTACTCAATATACAATGTAGCACATATGTTCACCATGTTTCTTAGAGG TCCTCTAGTTTGCTACCTAATTGTAGAGAGCTTGTTACCTATCATTCCATCAGAAAATATGACCTTGGTACTTGTGATTT ATATGTTCCATCTTGATGAGGTTGAATTTTGAATAATTTGATTAACTTCATCTGTTGTATCTTCTTTTCAGTTAGGAAAA ATTTCTAAAGCATTGGAGATTAGCAGAATAATGAAAATGGCTGGCATTAAACATAACATGAAGACCTACTCTATGCTGAT CAATGGATTCTTGAGGTTGAAAGATTGGGCCAATGCATTCTCTATTTTTGAAGACATCACTAAAGATGGTTTGAAACCTG ATGTAGTACTCTACAATAACATGGTACAAGCTTTTTGTGGGATGGGTAATATGGATCGTGCCATTTGTATTGTGAAGCAG ATGCAGAAGGAGAGGCATAGACCTACAACACGCACATTTTTACCCATTATACATGGTTTTGCAAGAGCTGGAGAGATGAG GAGATCCTTGGAGATTTTTGATATGATGAGAAGGACTGGCTGCATTCCTACTGTGCACACATATAATGCTCTTGTTCTTG GCCTAGTTGAGAAGCGTCAGGTAACCTGTGATTGAAATTATTAATTTAGATATGCGATTGACATGACTTGGTTTTTACTA CTTCTCCTTGTCTACTTTGTGTTAATTTATGTGGATTTGAAAAAGGAAAAATAAATAGCTAAAGAGGTAAGTGAAGTAAA TTAATTAACATATAATAGTTATATTGCAATCGCTTTATTGAAGAAAACATAAATTGAGTTTGTGTTTTTCCTTTAAAAAT CATTTCTGCAAATTTTGAAATTATAAGTTGAAAATGGCACAACTATAGTATGCACCACTATAGCTTCCATTGCTTCTTAT TGTTGTAAGGTATCAGCATTGCTGTGTTCGGAAAGAATTGCAGAAACATTAAAATAAAGGCTAACCTGTAATCATGACAA ATTCTAAACGATATAACAGTGATTTATGAGGTTAGATATTTTCATAGCAAAACACCTAACTATTGATTGGAGAACCTGAG AACATATAGATAACCAATCCTTGTTTGTTCAGTATGCATTAGTAGTAGTTCCGAGTCTTAATGCTAAACAAGTTAGAGTG AGTAGTCTTTCTACCAGGAGGACAGTTTCTCTTTAATTAACTGCTTTGTTTGAGTACATACTCCCTTGTTACTCTGTTTA TATCATGAAAAAAAATGTCTTTTTATAATTTAAAATTCCTTGTTGTTCTCCTCGCTCATTATTTACTACTTTCTCTAAAT TATGGTTCTTTTTGTATTTTTTGTGTAGATGGAAAAGGCAGTAGGAATATTGGATGAAATGAATCTGGCCGGTGTTGGGC CAAATGAACATACATATACAACTCTCATGCAAGGTTATGCTTCACTGGGTGATACTGAAAAGGCATTTCAGTACTTTACG ATATTGAAAAATGAGGGCCTGGAGGTTGATGTATATACTTATGAGGCATTGTTGAAGGCATGTTGCAAGGCAGGCAGAAT GCAGAGTGCCCTAGCTGTCACAAAGGAAATGAGTGCAAGAAAGATCCCAAGAAACACTTTTGTTTACAACATACTAATTG ATGGGTATGAATAATTTACATTTGGCTGTACTGGAAGTTTTCAGTTTTATCTAACATTTAATCTTATATATTCTTGAATG ATGGGCATGTTGAGCTATCTGTTATATGTAATTTGTTGTTATAACTCTGCTAGGGTATGGTTTGTCATGATTAGATTTTA TTCTGTTATGATTTCTGGTTATCTTATTGTCATAGCTTGTTAGCTTGTCTCCCTATTTAGTTTGAGGAAGCTTAGTATTT GAATATTGTACATCTGAATCGTGTTAATGTAAATCGATTATTCAGAACACATTCCAATTTCAAGAGGGCAATTTGTGTTT TTTCTCAATTACTTTTTTCCCATGTGTATACACTTGTATATTTTAATATTTCTGCCCTTTACAGCCTTCACTAGGACTTA ATATTTTACTAACCTAATTTAATTTCTTAGTTGGGCTCGGAGAGGTGATGTTTGGGAAGCTGCGGATCTGATGCAACAGA TGAGGAAGGAAAAAGTTCAACCTGATATCCACACCTACACTTCTTTTATAAATGCTTGTTGCAAGGCTGGGGATATGCAG GTATAATGTTTGTTGAGAAATATAATTTATTGTTAAAGATTGTGATTACTTATTGGTGACTAAACCCTAAATCATGACCT CTAAAACTAAGAGGGTAAGTGTCATTTCTAATGCATCTGCATCATCATTTACCATGAGAGTGAACTGTGATGGAAAACGT GGCTCGTTATGCACCTCGTGTCAATTCCTTCTGCACACTCTCACGAAGTGTCTTTTGAGTTACTCATTCTTCTGCTGGTG TATTCCTCAAAGCTTGATTTTGAAAATTACTATAATTTATTTATATCAGTAGTTAATCTTTTTCCCCCCTCTGCTAGAAT GCAACACAGATTATCCAAGAAATGGAAACAGCTGGTATAAAACCAAACCTCAAAACCTACACCACTCTAATACATGGTTG GGCTCGTGCTTCTTTTCCCGAGAAGGCTTTGAGGTGTTTTGAAGAGATGAAAGCGGCTGGATTGAAACCAGACAAAGCAG TTTACCATTGTCTCCTGACATCTTTGCTATCAAGAGCCACTTTTGCTCAATCGTACGTTTATAATGGCCTCTTGTCTGTG TGTAGAGAGATGATAGAATCTGAAATGACTGTTGATATGGGAACTGTGGTCCACTGGTCAAGATGTTTACGCAAGATTGA GAGGACAGGAGGAGAACTAACAGAAGCCCTACAAAAGACCTTCCCTCCGGATTGGACCTCACATAATGTTCTTGATGTCA ATTGTGAAACAGAAATTGCTGATCCTGAAATAGATGATGATGATGATGTATATTATTTCAAAGAAATTGACAATGATGAT GAGGACTCTGATGCTGAAGATTGTGATGATGATCCATCAGACAGGTGATTGTTTTGAATTATGTTATTGTTAATGGAAGT GGCAGAATGCCATGGTTGCATGTTATTGCCAAGTCTCTCGGCTCTCGCCATTAAATTCTCTATTTACTTTTTCTTCTATG AAAATGGGCAAAAATGGTGACTTCCTTTATACCTTCACTAGGTTAAGAATCCAGGAGTGTTCCTGCGTTGGGAACGGACA TTAAAATTCCATCTCCTGTTGTAAAGTCTTTGCATGTATAGCATTAAATCAAGTTGTGATTTGTAGATTGAATATGTATG TTTCATTTATGATCTTTGAAAAAAATTATTAGCATTCGATGTACTAATGAATGTTACAAGAAAAAGTAAAGGAGCCATTT AATAGTTGAATATCTTCGGTATGGTGTATAGATGGTGTTCAGTTTGTTGTCTGCA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0015400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAGCTTTCTGTTTCTCATTCCCCACCTCACACTTATCCATTCCCCCCAAACACCACTCTTCCTCCGCCACCACCAC CACCGTTTCCTCCTCCCTCAAACCGCCGCCGGACTCCAACAACTCCGCCGCTCCCTTCCGCCGCCCCCTCAAAACCACCA CCACTCCTCCCTCCAATCCTAAACCCACACCAAAACCTAAACCCAAACCCGCCCCAACTTCAAACCCTCTCAAAAATCCC TTCAAATCCTCTCATGCCCTCACCAACAAGCTCTGGCTCACTAGTAAACTCTCTCCTCCTCCTCCTCCACCACCACCACC GCCACCACCACCGTTACCACCACCGGAACGAGAAACTGAAATCGCCGAAGACAAGGGCGCTGATGACGTAAACCGGTTCC GGCAACCGGGGAAAATCTTCGTCGGGAACTTGCCAGTGTGGGTGAAGAAACCCGAGGTCTCCGAGTTCTTTCGCCAGTTT GGCCCGATACGCAGCGTGATTTTGATCAAAGGTCACCACGAGACGGAGAGGAGCGCGGGGTTCGGGTTTGTCATCTACGA CGGGGAGACGGCGGAGAATTCGGCCATGAAGGCGGTGGAGTTCGACGGCATTGAGTTCCACGGGAGAGTGTTGACGGTGA AGCTGGACGATGGGAAGAGGTTGAGGGAGAAGTCGCGGGAGAGGGAAAGGTGGTTGGAGGGGAATGATGATAAGGAGGAG TACAGGTCCACGTGGCATGAGGAGAGGGATGGTTCCAGGAAGGAGTTCCAGAAGGTTCTGGAGACTGAACCGGAGAATTG GCAGGCCGTTGTTCGCGCTTTCGAGAGAGTTAAGAAGCCTGCCAGAAAAGAATATGGGCTGATGATAAAATATTATGCAC GACGAGGGGACATGCATCATGCACGTCAAACATTTGAGAGCATGCGAGCGAGAGGAATAGAGCCATCTTCACATGTGTAC AGTAGTCTTATTCATGCTTATGCAGTTGGTAGAGATATGGAAGAAGCTTTACATTGTGTTAAAAAGATGAAGGAAGAGGG CATTGAAATGAGTATAGTGACATACAGTATTGTTGTCGGGGGATTTGCTAAAGTGGCCAATGCTGATGGTGCAGATCACT GGTTTAAGGAGGCCAAAGAGAAGCTTCCATCTTTAAATGCAGTCATTTATGGGAGCATAATTTATGCACACTGTCAAACT TGCAATATGAAGCGAGCAGAAGCCTTGGTGAGGGAGATGGAAGAACAAGGGATAGATGCTCCCATTGACATATATCATAC CATGATGGATGGTTATACAATGATTGGCAATGAAAATAAATGCTTAATCGTGTTTGAAAGACTTAAGGAATGTGGTTTCT CTCCCTCAGTTGTCACCTATGGGTGTCTTATTAACCTTTACACCAAGTTAGGAAAAATTTCTAAAGCATTGGAGATTAGC AGAATAATGAAAATGGCTGGCATTAAACATAACATGAAGACCTACTCTATGCTGATCAATGGATTCTTGAGGTTGAAAGA TTGGGCCAATGCATTCTCTATTTTTGAAGACATCACTAAAGATGGTTTGAAACCTGATGTAGTACTCTACAATAACATGG TACAAGCTTTTTGTGGGATGGGTAATATGGATCGTGCCATTTGTATTGTGAAGCAGATGCAGAAGGAGAGGCATAGACCT ACAACACGCACATTTTTACCCATTATACATGGTTTTGCAAGAGCTGGAGAGATGAGGAGATCCTTGGAGATTTTTGATAT GATGAGAAGGACTGGCTGCATTCCTACTGTGCACACATATAATGCTCTTGTTCTTGGCCTAGTTGAGAAGCGTCAGATGG AAAAGGCAGTAGGAATATTGGATGAAATGAATCTGGCCGGTGTTGGGCCAAATGAACATACATATACAACTCTCATGCAA GGTTATGCTTCACTGGGTGATACTGAAAAGGCATTTCAGTACTTTACGATATTGAAAAATGAGGGCCTGGAGGTTGATGT ATATACTTATGAGGCATTGTTGAAGGCATGTTGCAAGGCAGGCAGAATGCAGAGTGCCCTAGCTGTCACAAAGGAAATGA GTGCAAGAAAGATCCCAAGAAACACTTTTGTTTACAACATACTAATTGATGGTTGGGCTCGGAGAGGTGATGTTTGGGAA GCTGCGGATCTGATGCAACAGATGAGGAAGGAAAAAGTTCAACCTGATATCCACACCTACACTTCTTTTATAAATGCTTG TTGCAAGGCTGGGGATATGCAGAATGCAACACAGATTATCCAAGAAATGGAAACAGCTGGTATAAAACCAAACCTCAAAA CCTACACCACTCTAATACATGGTTGGGCTCGTGCTTCTTTTCCCGAGAAGGCTTTGAGGTGTTTTGAAGAGATGAAAGCG GCTGGATTGAAACCAGACAAAGCAGTTTACCATTGTCTCCTGACATCTTTGCTATCAAGAGCCACTTTTGCTCAATCGTA CGTTTATAATGGCCTCTTGTCTGTGTGTAGAGAGATGATAGAATCTGAAATGACTGTTGATATGGGAACTGTGGTCCACT GGTCAAGATGTTTACGCAAGATTGAGAGGACAGGAGGAGAACTAACAGAAGCCCTACAAAAGACCTTCCCTCCGGATTGG ACCTCACATAATGTTCTTGATGTCAATTGTGAAACAGAAATTGCTGATCCTGAAATAGATGATGATGATGATGTATATTA TTTCAAAGAAATTGACAATGATGATGAGGACTCTGATGCTGAAGATTGTGATGATGATCCATCAGACAGGTGA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0015400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEAFCFSFPTSHLSIPPKHHSSSATTTTVSSSLKPPPDSNNSAAPFRRPLKTTTTPPSNPKPTPKPKPKPAPTSNPLKNP FKSSHALTNKLWLTSKLSPPPPPPPPPPPPPLPPPERETEIAEDKGADDVNRFRQPGKIFVGNLPVWVKKPEVSEFFRQF GPIRSVILIKGHHETERSAGFGFVIYDGETAENSAMKAVEFDGIEFHGRVLTVKLDDGKRLREKSRERERWLEGNDDKEE YRSTWHEERDGSRKEFQKVLETEPENWQAVVRAFERVKKPARKEYGLMIKYYARRGDMHHARQTFESMRARGIEPSSHVY SSLIHAYAVGRDMEEALHCVKKMKEEGIEMSIVTYSIVVGGFAKVANADGADHWFKEAKEKLPSLNAVIYGSIIYAHCQT CNMKRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNENKCLIVFERLKECGFSPSVVTYGCLINLYTKLGKISKALEIS RIMKMAGIKHNMKTYSMLINGFLRLKDWANAFSIFEDITKDGLKPDVVLYNNMVQAFCGMGNMDRAICIVKQMQKERHRP TTRTFLPIIHGFARAGEMRRSLEIFDMMRRTGCIPTVHTYNALVLGLVEKRQMEKAVGILDEMNLAGVGPNEHTYTTLMQ GYASLGDTEKAFQYFTILKNEGLEVDVYTYEALLKACCKAGRMQSALAVTKEMSARKIPRNTFVYNILIDGWARRGDVWE AADLMQQMRKEKVQPDIHTYTSFINACCKAGDMQNATQIIQEMETAGIKPNLKTYTTLIHGWARASFPEKALRCFEEMKA AGLKPDKAVYHCLLTSLLSRATFAQSYVYNGLLSVCREMIESEMTVDMGTVVHWSRCLRKIERTGGELTEALQKTFPPDW TSHNVLDVNCETEIADPEIDDDDDVYYFKEIDNDDEDSDAEDCDDDPSDR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP_GRAM_POSITIVE
SignalP-TM
1 23 23 - –
MobiDBLite
mobidb-lite
10 120 111 - –
MobiDBLite
mobidb-lite
14 54 41 - –
Gene3D
G3DSA:3.30.70.330
53 232 180 2.7E-18
IPR012677
MobiDBLite
mobidb-lite
55 75 21 - –
MobiDBLite
mobidb-lite
76 95 20 - –
MobiDBLite
mobidb-lite
96 116 21 - –
SUPERFAMILY
SSF54928
101 215 115 6.38E-19
IPR035979
ProSiteProfiles
PS50102
137 218 82 15.733
IPR000504
SMART
SM00360
138 214 77 5.7E-15
IPR000504
Pfam
PF00076
139 211 73 8.4E-12
IPR000504
CDD
cd00590
139 214 76 4.44949E-15 –
Gene3D
G3DSA:1.25.40.10
249 368 120 1.8E-23
IPR011990
PANTHER
PTHR46128
268 432 165 6.7E-141 –
PANTHER
PTHR46128:SF1
268 432 165 6.7E-141 –
ProSiteProfiles
PS51375
281 315 35 10.468
IPR002885
TIGRFAM
TIGR00756
285 316 32 6.9E-7
IPR002885
Pfam
PF01535
285 313 29 0.0041
IPR002885
Pfam
PF13041
315 364 50 4.5E-10
IPR002885
SUPERFAMILY
SSF81901
316 530 215 6.28E-7 –
ProSiteProfiles
PS51375
316 350 35 10.622
IPR002885
TIGRFAM
TIGR00756
319 351 33 9.3E-7
IPR002885
ProSiteProfiles
PS51375
351 381 31 7.344
IPR002885
Gene3D
G3DSA:1.25.40.10
369 506 138 9.1E-28
IPR011990
ProSiteProfiles
PS51375
386 420 35 9.788
IPR002885
TIGRFAM
TIGR00756
388 418 31 6.1E-5
IPR002885
Pfam
PF01535
388 418 31 0.0021
IPR002885
Coils
Coil
396 416 21 - –
PANTHER
PTHR46128:SF1
417 593 177 6.7E-141 –
PANTHER
PTHR46128
417 593 177 6.7E-141 –
ProSiteProfiles
PS51375
421 455 35 8.912
IPR002885
Pfam
PF01535
424 453 30 0.018
IPR002885
TIGRFAM
TIGR00756
424 457 34 0.002
IPR002885
Pfam
PF13041
455 503 49 9.8E-11
IPR002885
ProSiteProfiles
PS51375
456 490 35 9.69
IPR002885
TIGRFAM
TIGR00756
458 491 34 5.2E-4
IPR002885
ProSiteProfiles
PS51375
491 525 35 11.181
IPR002885
TIGRFAM
TIGR00756
494 527 34 4.4E-6
IPR002885
Gene3D
G3DSA:1.25.40.10
507 608 102 4.4E-28
IPR011990
Pfam
PF13812
513 566 54 1.0E-8
IPR002885
PANTHER
PTHR46128
524 656 133 6.7E-141 –
PANTHER
PTHR46128:SF1
524 656 133 6.7E-141 –
ProSiteProfiles
PS51375
526 560 35 11.389
IPR002885
TIGRFAM
TIGR00756
528 561 34 1.1E-5
IPR002885
ProSiteProfiles
PS51375
561 595 35 11.016
IPR002885
TIGRFAM
TIGR00756
564 596 33 4.2E-6
IPR002885
Pfam
PF01535
568 593 26 0.0025
IPR002885
PANTHER
PTHR46128:SF1
594 763 170 6.7E-141 –
PANTHER
PTHR46128
594 763 170 6.7E-141 –
ProSiteProfiles
PS51375
596 630 35 10.369
IPR002885
TIGRFAM
TIGR00756
598 632 35 8.0E-5
IPR002885
Pfam
PF01535
599 627 29 0.002
IPR002885
Gene3D
G3DSA:1.25.40.10
609 730 122 3.8E-34
IPR011990
Pfam
PF13041
630 679 50 1.0E-12
IPR002885
ProSiteProfiles
PS51375
631 665 35 10.589
IPR002885
TIGRFAM
TIGR00756
633 667 35 9.0E-6
IPR002885
PANTHER
PTHR46128
653 849 197 6.7E-141 –
PANTHER
PTHR46128:SF1
653 849 197 6.7E-141 –
ProSiteProfiles
PS51375
666 700 35 11.213
IPR002885
TIGRFAM
TIGR00756
668 701 34 1.6E-6
IPR002885
ProSiteProfiles
PS51375
701 735 35 11.915
IPR002885
Pfam
PF13041
701 749 49 5.7E-15
IPR002885
TIGRFAM
TIGR00756
704 737 34 2.0E-6
IPR002885
Gene3D
G3DSA:1.25.40.10
731 875 145 8.6E-31
IPR011990
ProSiteProfiles
PS51375
736 770 35 13.099
IPR002885
TIGRFAM
TIGR00756
738 771 34 1.6E-8
IPR002885
Pfam
PF13812
759 814 56 1.8E-9
IPR002885
ProSiteProfiles
PS51375
771 805 35 12.419
IPR002885
TIGRFAM
TIGR00756
774 806 33 9.8E-9
IPR002885
MobiDBLite
mobidb-lite
910 930 21 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0015400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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