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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0015400 |
| Transcript ID | LotjaGi6g1v0015400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein, putative; TAIR: AT5G04810.1 pentatricopeptide (PPR) repeat-containing protein; Swiss-Prot: sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810, chloroplastic; TrEMBL-Plants: tr|A0A072VGX7|A0A072VGX7_MEDTR Pentatricopeptide (PPR) repeat protein; Found in the gene: LotjaGi6g1v0015400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:2729197..2738541) extracted from Lotus japonicus Gifu genome v1.2.
GGAGAGGTTGTGAATAATGGAAGCTTTCTGTTTCTCATTCCCCACCTCACACTTATCCATTCCCCCCAAACACCACTCTT CCTCCGCCACCACCACCACCGTTTCCTCCTCCCTCAAACCGCCGCCGGACTCCAACAACTCCGCCGCTCCCTTCCGCCGC CCCCTCAAAACCACCACCACTCCTCCCTCCAATCCTAAACCCACACCAAAACCTAAACCCAAACCCGCCCCAACTTCAAA CCCTCTCAAAAATCCCTTCAAATCCTCTCATGCCCTCACCAACAAGCTCTGGCTCACTAGTAAACTCTCTCCTCCTCCTC CTCCACCACCACCACCGCCACCACCACCGTTACCACCACCGGAACGAGAAACTGAAATCGCCGAAGACAAGGGCGCTGAT GACGTAAACCGGTTCCGGCAACCGGGGAAAATCTTCGTCGGGAACTTGCCAGTGTGGGTGAAGAAACCCGAGGTCTCCGA GTTCTTTCGCCAGTTTGGCCCGATACGCAGCGTGATTTTGATCAAAGGTCACCACGAGACGGAGAGGAGCGCGGGGTTCG GGTTTGTCATCTACGACGGGGAGACGGCGGAGAATTCGGCCATGAAGGCGGTGGAGTTCGACGGCATTGAGTTCCACGGG AGAGTGTTGACGGTGAAGCTGGACGATGGGAAGAGGTTGAGGGAGAAGTCGCGGGAGAGGGAAAGGTGGTTGGAGGGGAA TGATGATAAGGAGGAGTACAGGTCCACGTGGCATGAGGAGAGGGATGGTTCCAGGAAGGAGTTCCAGAAGGTTCTGGAGA CTGAACCGGAGAATTGGCAGGCCGTTGTTCGCGCTTTCGAGAGAGTTAAGAAGGTTGATCTTCTTAACTTTTTACTTGTA GTGTGTATATATGATTATAATGCTGTGTTTCTAACAATTGTATGGCTTAATTTTGAGGGATTGGGTTGGGGTTATGAAAA ATACATGGATAAGTTTATTTGAGAATTGAAGAATTCGACAATGAAATTTGCGCCTGTGATGAGACGGGTTTCATCTTCAA TTTGAATTGGAAGGTATAAAAAGTTAAATTGTTCTTTAATAACATGTGGATGTGGCGTACTCAGTGTCATCAGGTTAAAA TGTCATTAATTAGTAATGTATGCTGTTTATTCTTCTTTAAACATGTTTAATGATGTTGGCTTGAAGTTTTTCTCAGTATT TAGTGATGATTGTTGTCATCTTTTGGCCAGTTTGTTGATCTAGCATGGGTTTTGGGGCTTTTTATGAGTTAAGGCTAGTA TCTATGTTATATTACCCATGCCTGATTTTTTCTCTGCATTCGCTGATGATTATTGACATCAATTATGTTTTTAGGAGAAT TTCTTATCCTTATCCTGGATGTTTGCTTTCTCTGTTTTGTTTAATTCTATCCGGTAATATGAAAATGGTGGTATGTATGT TATTTCTGCATACATAAAGATGGTTGCATGAAAAGTTTTAATGTGCACTCGTGAGTTGGTTTCACCTTTTGTCCTTAATT TTTTCAGCCTGCCAGAAAAGAATATGGGCTGATGATAAAATATTATGCACGACGAGGGGACATGCATCATGCACGTCAAA CATTTGAGAGCATGCGAGCGAGAGGAATAGAGCCATCTTCACATGTGTACAGTAGGTAAAATCATTAAACGAGATACTGC TTTGAGCTTTGGTTTAATTTTAATATGTACTTCTGCTTTTCAGCAGATGCCACATTTTGACAGGCATGTGTTAACCTGTC AGAGATGTACATGTGAGTCAAGTGATTTGTCTTTCCAAATTATTGATTGAGAAAGAAAGTATATTTTTTATTTGACTGTT TAGTTTAGTTTCTGTTATTCAAATTGTTTTATGTTAGAACCAGAAATACATAAAGGGAAAGAGAAAGGAGAAACAGGGAG AGAAGAGGGAAACAGGGGAAGTGAGAACTCAATATCTTCAATATCATTCTACATTACAATTACAGGGACTGACTCTTACT TATATAGCCACAAGGAACTAACCCCCTAACCGACTCAACTGACTAATGGAATTCTCTATTAAGTTAGTTTTACAATTGGT TCCAATTAATTTTTTTTAGGTTTCTGACTTTCTGTTACTTTTAAGTTTTTACTCTTCAAATTAAGTTCTCTATTGAGTTT GAAAAATAGCTCCACTTCATTTTTTTCCTCTATGCTTTTGAACTTATGTTGATGTAATATGTGATGGTTATGTTTTAATG TTTGGATCAGATGGCGCAGAAAATGTGTATTTAATGTAATATTTTACTCTAACTACTGATATCAGCAATGTAATAGAGAT TTACGAGAACCAAATGAAAAAGATACACTAACACACATTTGAGAAGCCCTAATCTCTCCTATCCACTCCTTAGTTTGTTC ATCCTTACCTTATTTCTATTCTGTTCTCTCTTTCTATATTTATCTACCGCTTCAAACAAATTTTCACTCTAATTGACCCT ATGGCCACACTGGCCATTAGTTGTCCCCAGTGATTCTAAATCTCTTGCTCACCTTGGGCTCTGATCTCTAACAACAATTC CTCACATGCACCTTCATATATTGCCTATCAAAAAAAAAAAAAAACATGCACCTTCATAATACGAGATTTCTTAAAATTCC ATTACAGTTTCTGGACAAGTCATTTGGTAAATATTTAAGGAAAATAGCGTATCCCCTTCTATTTGCAGTCTTTCTTTTAC TCATTGATTTCTTCTTAATACTATAAAAAGCACTATGGTTATACTTTCTACTAACTTTGATAATTAATACATGTTAAATG TTTGCAGTCTTATTCATGCTTATGCAGTTGGTAGAGATATGGAAGAAGCTTTACATTGTGTTAAAAAGATGAAGGAAGAG GGCATTGAAATGAGTATAGTGACATACAGTATTGTTGTCGGGGGATTTGCTAAAGTGGCCAATGCTGAGTAAGTAAACTG ACAAATTTCCACCATGGCTATATCTTTTATAAAGAACATTGGTTCTGGTTATTAGTTTATTTTTTTGTTTGTCAAAGATT TCACTTTTAATTGCATTAGCTGTTCGGTTTATGTGTTCAAAGTTATAGACCGTAGTGTTTTAGGTATGGAGGTTAAAACC ATGCTCTTAAAAATAAAATAAAAATAGTGATATTGATGTGAATGATATGTTTGATGTCACCAAGGTTGTCAACGCATAAT TGTAACACAGATTGTAGGATCCTATCTAAGACACAAAATTATGTTTAAAACAACACAGAAATGACCTTGAAAAGCTAGAT AACATAAGAAAAATAACCTTGAAATCACAATTAAGTTGTGGTGTAAATAACATAAATAGTTTTATATTATATTTGAAAAA CTTACTATCTGATAGACTAATGTCATGTCATGAACCTACTATCTGAAAAACTTAAGTTGTGGTGTACTGCAATTGATACA GATAAACTACATCCCTTCCAACTATATAGAATGAGAGTATATCTGCCATTGATAACTACATCCCTTATTTGCATTTGTCT CATTCTCTTTTTTCACAAGAACATGGTAAACTATGTAGTTGCATCACTACGGATCTCACTTGGTCTTCTCACTCCCAAGT CCTAACTCCCAAAATGTGAAGTGTACTGCAATGATTGGTTTTGGTGCCTTTCTCTTATTAAGGGATTGGATTAACTTCGA ACTTTCTCATTTGTTCTTGTATTTCGTTTATAAATAACCCCACTTTCATGTATTCTGTCTTTTTTTCTAGTGCTGGTGTA AAACATTTGGTCCAGTTTGATATAAGAATATAATTTTGAGGCCTTGTTCATAAACGAGTGAAGATTGAAGCATCAGTTTT GTATCCTGGAGATAACATTTATTTGATGTTGTTTTGGAAGTGGTGCAGATCACTGGTTTAAGGAGGCCAAAGAGAAGCTT CCATCTTTAAATGCAGTCATTTATGGGAGCATAATTTATGCACACTGGTGAGCATTCAGACTTATTTCATGGCATCAGTT TTATACGTATGATACAAAATCTTTGATAGGCAGGGAAGTTAAAATAAACTAATCTACATAGCAATGTTTACCAAGAAGAA ACATATACTATTCAAGTTGTTAATTATATCAGTATTTGGTTATCTATTCGCTAGTGTGGTTCATGTATGTATCTTATAGT TATTGTTACTCAGGCTTCTGTTTCTGAAAGTATCCCAGTTTTTCTTTATTGTCAAATGATTATCATTTCTATTCAATCCC CCCCCCCCCCACGCACACCCTTTTCATGTATAGTTTTTGATATCCTGATGTATTTTATAGTCAAACTTGCAATATGAAGC GAGCAGAAGCCTTGGTGAGGGAGATGGAAGAACAAGGGATAGATGCTCCCATTGACATATATCATACCATGATGGATGGT TATACAATGATTGGCAATGAAAATAAATGCTTAATCGTGTTTGAAAGACTTAAGGTATGGCTTGTTCATATTTCTTTTTT TGGGTGCGACGATTGGCTTTGTAATTTTGATATGCTATGTGCTTTCATCAATTATATATCTTAATAGAAAATGTCTCAGT CCATAAGAAAATCATATAACAATGAGGACTTTAGCATAATTTCTAAATAAAAATTCCTTTCGTATGTAAGATTCTCTTTG GAAGAGCAAAGCTTTTTGCTGGTACTCTAGGTTTCCTTTTGATCATTGTATCATCATTGAACTTTCTTGCAACTTTTCAT GTCATACGTATAATAGAATATTTCTTTCTGTAAATTCTTCTAAACATTTACAATCTTATGAAAAATTCCCTTCTCTAGTT ATCAGATTTCTTCCCTTTTAAGCGATTTTTTTACTCATAAAAAATTCAATAGAACTTGAGCAAATTGTTCCATGTTCCTA CTCTAGTCCGAAACTGTTCCAATTTTGCAGAAGCTTACTTTTACTAAGTTCTTGCCCTTTTGTTAGAATGTTCTGGTTTA GCTAAGGCATGTACCTGTTATATAACATTAGTAATCAACCTAGAATATTAGTAAGAAACGATGTGTTAGTTTGCTGTTTT ATATAAGATATATTTTTTAAAAGTTCGTATCATCACATGAATACTATTTTGTCTCTGTCTCTTCTATCTTTTACCTATAC CTTCAACGTGTTATCCTAGTGGCACCATTCTTCATTTCTTGACCTCTGATGAGTTCCCAAATATCTAGAACTCATTTTGT CTAACCTTCCCCTCCCATGGCATCTTTGTCCTGTGACTCTCCCTCTTTGTATTTTGACTTTGGTAACTGGAATATTTTTC TCCTACCCATGGCGTTGTAGACCCTTAAAACTAACATTTGTGGTTGTATTCACATCCTCACCATGATTCCCTCACTCTGC AGCTATCATCTCCATCTTTCAGCCTCTGCAGTATCCAAATCCAATTGTTAAGACTTCATTTCGTTCACTTTTTATTCCTA TTAGAATTTGGGAGGCCTAACTCAACCCAAAAGCTAGCTCCGGAGTTGAGGATTACCTTCTCATATATGAGGGCTATCTG GGCCATATCTCTAGTCAATGTGGGACAACTCAACACACCCCCTCATGCGTAGGGCTAGACATCTGGAGCTTGGGATATGC AGGAATGAACATCTACGAGTAGCCCATATACATGTGGGCTCCTCTTAATGGATCTAGGATAGACTCTGATACCAACTTGA ATGAAATATTCTGATTAATTGTATGCATCCCTATTTATCCTAAAATGGCAATCACCTAAAATAGGAAAAGATAAAATAAT CCTATTCTAATTAAAGTAATAAAGATAAAATGTACCAAACATATTTACTCCCTATTCTAATAGGCCTCCCTAGGGTTTGG TGTTATATTTGTGATTTTTTTTTTGAGAAAATAATAAACAATATCCATTTAATTATTACATGCTTCAAGTGTATAACATC TTTGTATACTTCTTGATTCTTAGGACAGTAGTCTTTGTTTATGTTTGAAATTTGTACTTTTTTCCCCCTAATTTGGCATT TAATACGTTGCTGAATAGTCACCCTGATATATTTCGACGTCATATATAAAAAAATTGTGCACTATTGCGCTTGACTTGAC ATTGAATGACACAGTAACATCTCTTTGTTCTGATGAAGGAATGTGGTTTCTCTCCCTCAGTTGTCACCTATGGGTGTCTT ATTAACCTTTACACCAAGGTGAGACATATTTCATGTTTTACATTAATTGGCCTATTTATGTTATCTAGTTCATCTATCTC TTTCAGCAGTTATTTGATTGAGCACTTTTTAGGATTTATTGCCATACATCTACTCAATATACAATGTAGCACATATGTTC ACCATGTTTCTTAGAGGTCCTCTAGTTTGCTACCTAATTGTAGAGAGCTTGTTACCTATCATTCCATCAGAAAATATGAC CTTGGTACTTGTGATTTATATGTTCCATCTTGATGAGGTTGAATTTTGAATAATTTGATTAACTTCATCTGTTGTATCTT CTTTTCAGTTAGGAAAAATTTCTAAAGCATTGGAGATTAGCAGAATAATGAAAATGGCTGGCATTAAACATAACATGAAG ACCTACTCTATGCTGATCAATGGATTCTTGAGGTTGAAAGATTGGGCCAATGCATTCTCTATTTTTGAAGACATCACTAA AGATGGTTTGAAACCTGATGTAGTACTCTACAATAACATGGTACAAGCTTTTTGTGGGATGGGTAATATGGATCGTGCCA TTTGTATTGTGAAGCAGATGCAGAAGGAGAGGCATAGACCTACAACACGCACATTTTTACCCATTATACATGGTTTTGCA AGAGCTGGAGAGATGAGGAGATCCTTGGAGATTTTTGATATGATGAGAAGGACTGGCTGCATTCCTACTGTGCACACATA TAATGCTCTTGTTCTTGGCCTAGTTGAGAAGCGTCAGGTAACCTGTGATTGAAATTATTAATTTAGATATGCGATTGACA TGACTTGGTTTTTACTACTTCTCCTTGTCTACTTTGTGTTAATTTATGTGGATTTGAAAAAGGAAAAATAAATAGCTAAA GAGGTAAGTGAAGTAAATTAATTAACATATAATAGTTATATTGCAATCGCTTTATTGAAGAAAACATAAATTGAGTTTGT GTTTTTCCTTTAAAAATCATTTCTGCAAATTTTGAAATTATAAGTTGAAAATGGCACAACTATAGTATGCACCACTATAG CTTCCATTGCTTCTTATTGTTGTAAGGTATCAGCATTGCTGTGTTCGGAAAGAATTGCAGAAACATTAAAATAAAGGCTA ACCTGTAATCATGACAAATTCTAAACGATATAACAGTGATTTATGAGGTTAGATATTTTCATAGCAAAACACCTAACTAT TGATTGGAGAACCTGAGAACATATAGATAACCAATCCTTGTTTGTTCAGTATGCATTAGTAGTAGTTCCGAGTCTTAATG CTAAACAAGTTAGAGTGAGTAGTCTTTCTACCAGGAGGACAGTTTCTCTTTAATTAACTGCTTTGTTTGAGTACATACTC CCTTGTTACTCTGTTTATATCATGAAAAAAAATGTCTTTTTATAATTTAAAATTCCTTGTTGTTCTCCTCGCTCATTATT TACTACTTTCTCTAAATTATGGTTCTTTTTGTATTTTTTGTGTAGATGGAAAAGGCAGTAGGAATATTGGATGAAATGAA TCTGGCCGGTGTTGGGCCAAATGAACATACATATACAACTCTCATGCAAGGTTATGCTTCACTGGGTGATACTGAAAAGG CATTTCAGTACTTTACGATATTGAAAAATGAGGGCCTGGAGGTTGATGTATATACTTATGAGGCATTGTTGAAGGCATGT TGCAAGGCAGGCAGAATGCAGAGTGCCCTAGCTGTCACAAAGGAAATGAGTGCAAGAAAGATCCCAAGAAACACTTTTGT TTACAACATACTAATTGATGGGTATGAATAATTTACATTTGGCTGTACTGGAAGTTTTCAGTTTTATCTAACATTTAATC TTATATATTCTTGAATGATGGGCATGTTGAGCTATCTGTTATATGTAATTTGTTGTTATAACTCTGCTAGGGTATGGTTT GTCATGATTAGATTTTATTCTGTTATGATTTCTGGTTATCTTATTGTCATAGCTTGTTAGCTTGTCTCCCTATTTAGTTT GAGGAAGCTTAGTATTTGAATATTGTACATCTGAATCGTGTTAATGTAAATCGATTATTCAGAACACATTCCAATTTCAA GAGGGCAATTTGTGTTTTTTCTCAATTACTTTTTTCCCATGTGTATACACTTGTATATTTTAATATTTCTGCCCTTTACA GCCTTCACTAGGACTTAATATTTTACTAACCTAATTTAATTTCTTAGTTGGGCTCGGAGAGGTGATGTTTGGGAAGCTGC GGATCTGATGCAACAGATGAGGAAGGAAAAAGTTCAACCTGATATCCACACCTACACTTCTTTTATAAATGCTTGTTGCA AGGCTGGGGATATGCAGGTATAATGTTTGTTGAGAAATATAATTTATTGTTAAAGATTGTGATTACTTATTGGTGACTAA ACCCTAAATCATGACCTCTAAAACTAAGAGGGTAAGTGTCATTTCTAATGCATCTGCATCATCATTTACCATGAGAGTGA ACTGTGATGGAAAACGTGGCTCGTTATGCACCTCGTGTCAATTCCTTCTGCACACTCTCACGAAGTGTCTTTTGAGTTAC TCATTCTTCTGCTGGTGTATTCCTCAAAGCTTGATTTTGAAAATTACTATAATTTATTTATATCAGTAGTTAATCTTTTT CCCCCCTCTGCTAGAATGCAACACAGATTATCCAAGAAATGGAAACAGCTGGTATAAAACCAAACCTCAAAACCTACACC ACTCTAATACATGGTTGGGCTCGTGCTTCTTTTCCCGAGAAGGCTTTGAGGTGTTTTGAAGAGATGAAAGCGGCTGGATT GAAACCAGACAAAGCAGTTTACCATTGTCTCCTGACATCTTTGCTATCAAGAGCCACTTTTGCTCAATCGTACGTTTATA ATGGCCTCTTGTCTGTGTGTAGAGAGATGATAGAATCTGAAATGACTGTTGATATGGGAACTGTGGTCCACTGGTCAAGA TGTTTACGCAAGATTGAGAGGACAGGAGGAGAACTAACAGAAGCCCTACAAAAGACCTTCCCTCCGGATTGGACCTCACA TAATGTTCTTGATGTCAATTGTGAAACAGAAATTGCTGATCCTGAAATAGATGATGATGATGATGTATATTATTTCAAAG AAATTGACAATGATGATGAGGACTCTGATGCTGAAGATTGTGATGATGATCCATCAGACAGGTGA
CDS sequence (LotjaGi6g1v0015400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGCGGTGGAGTTCGACGGCATTGAGTTCCACGGGAGAGTGTTGACGGTGAAGCTGGACGATGGGAAGAGGTTGAG GGAGAAGTCGCGGGAGAGGGAAAGGTGGTTGGAGGGGAATGATGATAAGGAGGAGTACAGGTCCACGTGGCATGAGGAGA GGGATGGTTCCAGGAAGGAGTTCCAGAAGGTTCTGGAGACTGAACCGGAGAATTGGCAGGCCGTTGTTCGCGCTTTCGAG AGAGTTAAGAAGCCTGCCAGAAAAGAATATGGGCTGATGATAAAATATTATGCACGACGAGGGGACATGCATCATGCACG TCAAACATTTGAGAGCATGCGAGCGAGAGGAATAGAGCCATCTTCACATGTGTACAGTAGTCTTATTCATGCTTATGCAG TTGGTAGAGATATGGAAGAAGCTTTACATTGTGTTAAAAAGATGAAGGAAGAGGGCATTGAAATGAGTATAGTGACATAC AGTATTGTTGTCGGGGGATTTGCTAAAGTGGCCAATGCTGATGGTGCAGATCACTGGTTTAAGGAGGCCAAAGAGAAGCT TCCATCTTTAAATGCAGTCATTTATGGGAGCATAATTTATGCACACTGTCAAACTTGCAATATGAAGCGAGCAGAAGCCT TGGTGAGGGAGATGGAAGAACAAGGGATAGATGCTCCCATTGACATATATCATACCATGATGGATGGTTATACAATGATT GGCAATGAAAATAAATGCTTAATCGTGTTTGAAAGACTTAAGGAATGTGGTTTCTCTCCCTCAGTTGTCACCTATGGGTG TCTTATTAACCTTTACACCAAGTTAGGAAAAATTTCTAAAGCATTGGAGATTAGCAGAATAATGAAAATGGCTGGCATTA AACATAACATGAAGACCTACTCTATGCTGATCAATGGATTCTTGAGGTTGAAAGATTGGGCCAATGCATTCTCTATTTTT GAAGACATCACTAAAGATGGTTTGAAACCTGATGTAGTACTCTACAATAACATGGTACAAGCTTTTTGTGGGATGGGTAA TATGGATCGTGCCATTTGTATTGTGAAGCAGATGCAGAAGGAGAGGCATAGACCTACAACACGCACATTTTTACCCATTA TACATGGTTTTGCAAGAGCTGGAGAGATGAGGAGATCCTTGGAGATTTTTGATATGATGAGAAGGACTGGCTGCATTCCT ACTGTGCACACATATAATGCTCTTGTTCTTGGCCTAGTTGAGAAGCGTCAGATGGAAAAGGCAGTAGGAATATTGGATGA AATGAATCTGGCCGGTGTTGGGCCAAATGAACATACATATACAACTCTCATGCAAGGTTATGCTTCACTGGGTGATACTG AAAAGGCATTTCAGTACTTTACGATATTGAAAAATGAGGGCCTGGAGGTTGATGTATATACTTATGAGGCATTGTTGAAG GCATGTTGCAAGGCAGGCAGAATGCAGAGTGCCCTAGCTGTCACAAAGGAAATGAGTGCAAGAAAGATCCCAAGAAACAC TTTTGTTTACAACATACTAATTGATGGTTGGGCTCGGAGAGGTGATGTTTGGGAAGCTGCGGATCTGATGCAACAGATGA GGAAGGAAAAAGTTCAACCTGATATCCACACCTACACTTCTTTTATAAATGCTTGTTGCAAGGCTGGGGATATGCAGAAT GCAACACAGATTATCCAAGAAATGGAAACAGCTGGTATAAAACCAAACCTCAAAACCTACACCACTCTAATACATGGTTG GGCTCGTGCTTCTTTTCCCGAGAAGGCTTTGAGGTGTTTTGAAGAGATGAAAGCGGCTGGATTGAAACCAGACAAAGCAG TTTACCATTGTCTCCTGACATCTTTGCTATCAAGAGCCACTTTTGCTCAATCGTACGTTTATAATGGCCTCTTGTCTGTG TGTAGAGAGATGATAGAATCTGAAATGACTGTTGATATGGGAACTGTGGTCCACTGGTCAAGATGTTTACGCAAGATTGA GAGGACAGGAGGAGAACTAACAGAAGCCCTACAAAAGACCTTCCCTCCGGATTGGACCTCACATAATGTTCTTGATGTCA ATTGTGAAACAGAAATTGCTGATCCTGAAATAGATGATGATGATGATGTATATTATTTCAAAGAAATTGACAATGATGAT GAGGACTCTGATGCTGAAGATTGTGATGATGATCCATCAGACAGGTGA
Protein sequence (LotjaGi6g1v0015400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKAVEFDGIEFHGRVLTVKLDDGKRLREKSRERERWLEGNDDKEEYRSTWHEERDGSRKEFQKVLETEPENWQAVVRAFE RVKKPARKEYGLMIKYYARRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVKKMKEEGIEMSIVTY SIVVGGFAKVANADGADHWFKEAKEKLPSLNAVIYGSIIYAHCQTCNMKRAEALVREMEEQGIDAPIDIYHTMMDGYTMI GNENKCLIVFERLKECGFSPSVVTYGCLINLYTKLGKISKALEISRIMKMAGIKHNMKTYSMLINGFLRLKDWANAFSIF EDITKDGLKPDVVLYNNMVQAFCGMGNMDRAICIVKQMQKERHRPTTRTFLPIIHGFARAGEMRRSLEIFDMMRRTGCIP TVHTYNALVLGLVEKRQMEKAVGILDEMNLAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTILKNEGLEVDVYTYEALLK ACCKAGRMQSALAVTKEMSARKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEKVQPDIHTYTSFINACCKAGDMQN ATQIIQEMETAGIKPNLKTYTTLIHGWARASFPEKALRCFEEMKAAGLKPDKAVYHCLLTSLLSRATFAQSYVYNGLLSV CREMIESEMTVDMGTVVHWSRCLRKIERTGGELTEALQKTFPPDWTSHNVLDVNCETEIADPEIDDDDDVYYFKEIDNDD EDSDAEDCDDDPSDR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 31 | 52 | 22 | - | – | |
| Gene3D | 51 | 203 | 153 | 2.1E-25 | ||
| PANTHER | 66 | 252 | 187 | 3.2E-142 | – | |
| PANTHER | 66 | 252 | 187 | 3.2E-142 | – | |
| ProSiteProfiles | 86 | 120 | 35 | 10.468 | ||
| Pfam | 90 | 118 | 29 | 0.0031 | ||
| TIGRFAM | 90 | 121 | 32 | 5.2E-7 | ||
| Pfam | 120 | 169 | 50 | 3.4E-10 | ||
| SUPERFAMILY | 121 | 336 | 216 | 3.92E-7 | – | |
| ProSiteProfiles | 121 | 155 | 35 | 10.622 | ||
| TIGRFAM | 124 | 156 | 33 | 7.1E-7 | ||
| ProSiteProfiles | 156 | 186 | 31 | 7.344 | ||
| ProSiteProfiles | 191 | 225 | 35 | 9.788 | ||
| TIGRFAM | 193 | 223 | 31 | 4.7E-5 | ||
| Pfam | 193 | 223 | 31 | 0.0016 | ||
| Coils | 201 | 221 | 21 | - | – | |
| Gene3D | 206 | 308 | 103 | 7.8E-21 | ||
| PANTHER | 222 | 398 | 177 | 3.2E-142 | – | |
| PANTHER | 222 | 398 | 177 | 3.2E-142 | – | |
| ProSiteProfiles | 226 | 260 | 35 | 8.912 | ||
| Pfam | 229 | 258 | 30 | 0.013 | ||
| TIGRFAM | 229 | 262 | 34 | 0.0015 | ||
| Pfam | 260 | 308 | 49 | 7.3E-11 | ||
| ProSiteProfiles | 261 | 295 | 35 | 9.69 | ||
| TIGRFAM | 263 | 296 | 34 | 3.9E-4 | ||
| ProSiteProfiles | 296 | 330 | 35 | 11.181 | ||
| TIGRFAM | 299 | 332 | 34 | 3.3E-6 | ||
| Gene3D | 309 | 414 | 106 | 1.5E-28 | ||
| Pfam | 313 | 409 | 97 | 1.6E-9 | ||
| PANTHER | 329 | 464 | 136 | 3.2E-142 | – | |
| PANTHER | 329 | 464 | 136 | 3.2E-142 | – | |
| ProSiteProfiles | 331 | 365 | 35 | 11.389 | ||
| TIGRFAM | 333 | 366 | 34 | 8.6E-6 | ||
| ProSiteProfiles | 366 | 400 | 35 | 11.016 | ||
| TIGRFAM | 369 | 401 | 33 | 3.2E-6 | ||
| PANTHER | 397 | 561 | 165 | 3.2E-142 | – | |
| PANTHER | 397 | 561 | 165 | 3.2E-142 | – | |
| ProSiteProfiles | 401 | 435 | 35 | 10.369 | ||
| TIGRFAM | 403 | 437 | 35 | 6.0E-5 | ||
| Gene3D | 415 | 538 | 124 | 5.7E-35 | ||
| Pfam | 435 | 484 | 50 | 7.6E-13 | ||
| ProSiteProfiles | 436 | 470 | 35 | 10.589 | ||
| TIGRFAM | 438 | 472 | 35 | 6.8E-6 | ||
| PANTHER | 459 | 654 | 196 | 3.2E-142 | – | |
| PANTHER | 459 | 654 | 196 | 3.2E-142 | – | |
| ProSiteProfiles | 471 | 505 | 35 | 11.213 | ||
| TIGRFAM | 473 | 506 | 34 | 1.2E-6 | ||
| ProSiteProfiles | 506 | 540 | 35 | 11.915 | ||
| Pfam | 506 | 554 | 49 | 4.3E-15 | ||
| TIGRFAM | 509 | 542 | 34 | 1.5E-6 | ||
| Gene3D | 539 | 682 | 144 | 1.0E-30 | ||
| ProSiteProfiles | 541 | 575 | 35 | 13.099 | ||
| TIGRFAM | 543 | 576 | 34 | 1.2E-8 | ||
| Pfam | 564 | 619 | 56 | 1.3E-9 | ||
| ProSiteProfiles | 576 | 610 | 35 | 12.419 | ||
| TIGRFAM | 579 | 611 | 33 | 7.4E-9 | ||
| MobiDBLite | 715 | 735 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0015400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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