Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0024100 |
| Transcript ID | LotjaGi6g1v0024100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nudix family hydrolase; TAIR: AT5G47650.1 nudix hydrolase homolog 2; Swiss-Prot: sp|Q94B74|NUDT2_ARATH Nudix hydrolase 2; TrEMBL-Plants: tr|G7J8V6|G7J8V6_MEDTR Nudix family hydrolase; Found in the gene: LotjaGi6g1v0024100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:4431236..4438516) extracted from Lotus japonicus Gifu genome v1.2.
TTCTCTTTTTATCTCTCTTATATCGTGTCATATATTATTGATATAATTTCTCTCTTCTTTCGCATTTCTTCTTTAAGTTT TTTGAAAAGGCATTTCTTCTTTGAGTATGAATGAAGTTATTGTGTGAACATGCACTTATTTTATTTTAAATTAAATGGTT AGTAGTCGAGGGACCTTAGAGATTAGTTAAATTTTGTAGCGCGTTTAATGTGAAACTTCAAAGAAAATTGTCATAAAATT CCCACGGTGTGAGTTTGAATTTCTGAGAGGTTTATTGGGTTTCCTATTGCTCCGTGTTTCGTCTTTTAGCTTGGTTTTTT CTTGTTGGTTTCTTGGTTCTAATCCCTCAAGCAACGCAAACATGTTCAATGACTCATTCAAAGTCCAGCCACATATTGCA CGGAAATTGTCCCCTTTAGCTCCCTATAAATATTCTCAAGCCATTATGCTCTCCCACATTGTAGTAATAATTACTTCATT TTGCTCTTCTCTTCTGTGTTGATCACATTCAATTTTCACATAATAATCTTAGTTACTGCATTTTGCTATATTTTCTCTTG TGTTGATCACATTTGATTTTCATGATGATGAGGTTTAGAGCTTGCAAGCTTTATACTTCTTGCCTTTTGGCAACTTCTAA ATTGATATCCACATCTTCTTCAGCTGTCCCTCAAATTCCAATTAGGGTTTTTCATTGCTTTAACATCCCTCAATCTCATG GTAATGCATATTTACCTTCATTAGTTTTTTTGTTGTTTATGAACATTATTCAAGTGCTAATAGATTTTAATGTCACCCCA ATAGATATTCATGTCATCCCCTTCTGCACTTTCAATGTGCGGAATGTAAAATATGTGTTCCGCACAGATAAGTGCAGTGT GTAATTGATTTCCGCACATATAAGTGTGGTAAAATTGGGTGGCGAGAAAACGAATAGGGGTGGCATTAAAATCAATTCCC TGCAGGCTGCCACAACAGTTTTCTTGTTGTTTATGAGCATACTTGAAATGCTAATTTGCTATCCATTTTAGGCTGCAAGA ACAGCTTTCTTTTCTCAAGACCATACATGTCAGCCTCTTCAGCTCTTTTGGCCAAGGATGAGGAAGTGAGAGGTAAAGGC ATCGGATTACTCAGAGCAGTTGAAGACAAACATGGGGGAGTAATTGTAAACATGGAGGAGCCTATGGATTCCTTGGTTTT TGCTTCTTTGTTAGAAGCTTCATTATCAGAATGGAAGAGACAGGTAGATTTCAAACCAACTACATGCATTGTTCAATCCA TATTTTAAATTGTGGTTGCGGTTATGTCATGAACCTAGAAATTAAGAACAATTGGAGCCGAGGTGGCCTCATTTGCAGTC ACAATGCAATTGCAATTTGCAAAGACCTCTAAAACTTTCATATTAAGATAGTAACTGCGACTGCGGTTGTGGATTACAAT TTCTGTCATTTGTAAGTCTGATTAGGTGTTTTGGACTCACCATTTCAATTTGTTCTTCATGTGGTCTTTTAGGGAAAGAA AGGAGTATGGATCAAGTTGCCCAGAGAACATTCAAATCTTGTGCCCTCTGCAGTGAAGGTAAAGACTAATTTTCTGCAAC ATAGCTTGGAATTTTACCAGAATCTATGAAAGTTAGAAGCCATTTTGTGATGATTTTTCATGCCTTGAAATCTTGTGCTG CTCCTTTTACAGGCTGGATTCAGATACCACCATGCTGAACCTGACTACTTGATGCTTGTAAACTGGATTCCAAATACTCC TGACACCCTTCCTGCAAATGCTTCCCATCGCGTTGGTATTGGTGCTTTTGTCATGAATACCAATATGGAGGTAATCCTTA TTTGTTTCCATTTTCAGTGGTTCTAGATTCTGTTTTTGTTTTTACCATCTCTTAGAAAACACGCAGAGAATGTTTTCTTT TTTTTTTTTACAAAAACAAACTGTTAAAGAATCTTGCAATAGTAAGGGAAATTTTAAAATCATTAGTGTTAATTTTTTTC GTAGACAAAATCACTAGTGTTATATTCACACCTCATTTCCACCAACATCCAGACTCAAAGAAAGAAAGAAATGAAAGCGA AGTGTGAGATATTATGGGTGGTGAGATGAGTAAATAAGAGCGAGATAGGAAAAAAATGAGGTAGAATTGGGATGGAACTT GGAAGCGAAAGCAGGTGTGAATATATGAAAGATGATAATATGTCTTTTAACAGGTCAAACTTTCAGAGTACTTTCTGGTA ATATAGTATGGTTTAGTTGTTACTTGTTGGGGCATCTAAAGTTCGTATCAGAATTTAAATTCTGTCCTTTTCATATCAAA TAAGATTCAGATTAAAGGATGTCTATTAAGATAATTGATAAAAAAATCTCAACTCATTTTATAGGTGCTGGTGGTTCAGG AAAGTAATGGCAGATTCAGTGGCAAAGGAATATGGAAATTGCCAACTGGAGCTGTAAATGAAGTATGTTACAGTGATGCT TGATCATTATACAACAAAACATAAATAGCCATAACTGATCATTGATTTTTTTTAGAAAATCATTTTTTAATTAATTTAAA TATCTTTTGCAGGGTGAGGATATTTGTAGTGCTGCAGTTAGAGAAGTCAGAGAAGAAACAGGGGTATGCAAAACCATATA AGATAGAGTTTAACCATTGAGTATTTTTTAAACCTTTTCAAAAGTCTAATGCAGCTGCGTTTTTTCTTCTTTCAGATAGA AACTGAATTTGTTCAGGTTTTAGCATTCAGGTAAGAGCAAGACCATGTAATTTCTTCGAATAGTATATACTCTCGGAATG TTACCATGGATTCTTCCTTTTTTAGTACTATGTGAAAGTTAGAATGATCATTTTACACTAGTACCAATGATCTGTAGCAT TTTACACTAGCATTACCATGGATTCCTATTATTGTATCATTCTACAATCATTTCCTCTTTAAATTCAATCTTGTATGATA TGTCTTTCTGGAATCAGGGAAGGGCATAAATCTTTCTTCCAGAAGTCAGACTTGTTCTTTGTTTGCATGTTGCAACCTCG CTCCTTTAACATTCAGAGGCAGGTTTCAGAAATTGAGGCAGCTCAGGTATGTGTTCTGAAGACTAATTAGCATTCAATTA TCATTCATGAATATGCCTGAGTGGCATTCTACAAATTTATTTTTCTTCCTGAATCTTAATCTTTACAAAGTTTATGAAGG CTGCCATGACATTAGCATCAGAAAACGTGTAAATTGGCAAATTGGTCCCTGATTATGGCGCATGCAAGTTAGTCCACGGA AGAAGGAAATACGTTTGAAGTCCTTGCATGTGTAAAACGTTGGACAAGTTAGTTCTACAGTCAGATTTTGTCAACTAAAA CATCAGTCAATTTCACTAAAGTTTTACATACTCAGGGACTTTCGAACATATTTTCTTCTACCGGTGACTAACTTGCCACC GTGATAATCTTTCAGGACTAACTTGCCTATTTATTCATCAGAAAACAAATAACTTCACATGAACTCCTAATAGATTTTAA TTTTATGTAGTAATATGCCAATTATTCTAATGTTGTTTTACTTTCTTTTCAGTGGATGCCAGTTGAGGATTATGTAGCCC AGCCTTTTGTCAGAGAAAATGAGCTATTTGACTTTCTTACAAAAATATGCTTAACAAAGTTGGATGGGAAATACACTGGC TTTTCTAGCCGACTTACTAGCACATCCTCTAGCAAGAAATCCTATTTGTACTTCAACCACAAGGATGGTGGCCGCTTGTT AGCTTCCAAACATGATCAGCATGCTTGACTTCCAATTTATGGGATCAGGATCCTCTCATGTTGAAATTTTGTGTTTATCT CTCTCTTCAGAAGTATTAAACAGGTAGAACCCTTTAATTATTTATGAAGAAAGAAATAGACACAATGTTTCACTTGACAT TGTCATGTGACATGAGAAGATCATAATCACAAGTTCTGTGACATTTACTTGCTAGGAGGCTTCATCATTATTTTGGGCTC ATTTCCTTTGACCAATAAGGGTTGTTAGCATTGTACAGAAATCTCAACACATTATTTTATTTTTCCAAGCCACAAGAGGG TAGGAATAATGCTTGCCATTTCATTATTTGTTCATTGTATCAAATCTTTCATTCTTGGGTGGAAGACTGCTGATTTGTTA CTTTTTTGTTTCAGATTGTTGTAATTTCCATCTCATAGACTATACCATTAATTAAAATAATAAGAACCAACTTTCTTATT TTTGTGATGTTGTGATCCTGCTTCAATGTATGCAGTTTTTGTATTACGTTTTCACTGGGATAGCTTCATATTTTCACCAC ACTGAATTTAACGAGTGGAAATTGATTTTAAAATGTTCCATCGATATTTTTGAGGAGTACATCACAGCTGCAATTGCAAT ATAAACCCTAGTGCGATAGCTAATGCTAAACAAGTTCATTGAAACTTGTCCAGAAATTTAACTCTTGTTGATTATTAAGA TTCATTCACACCCAACTTTTTTTTCATTTCATTTCTACTCAAATTTTGTTCATATCTCCCTCTTCGTTGGCGAAGGCTAA GTAAGGTGCACAAGCTTGTAAATGATGTATGTGTGCAAGATAGCATTCTTACCATGATACTAGAAAAATTAGATGTCTGA GATTGAATCAATGAAATGACCCAAATACCTTTCCTTCAGTCCACCTCTCCACTCAGATGCTTCTTCTTCGGGTGCATTCT TACCATAATACTATAGATGTTGAGAAGTCTCGCATTGATTATATATATAGCGAACATAACCCTTATATATGGGAATACAA TCCTCCCAACTAACTTTTGGGGTACAGCTAGACCTCTTAAATTCTAATACAAACCAACATGCAAAAACTTAAAGCAAGTT TGAACTAAAAAGTAACAACATATTTTCGTCGCTAATCACTTACTCTTCCAATTCTCAGGTAAATTGGAGACCTGGCAACC TTTTGGCCATCTTCACCCCAAGCAAGTTTGAATTTTTCGACTACATCCTCGCGAAGAATCTCCACTCCCTTCTCCTTTGC AGTCTGATATGCTGACAATGATCTTATATAAGTAAATAAACTATCCAAATCCATCATGGTCTCCATCACAAACTCAAAAG GCCCTGTGTGATCAGTATCCACAGGCACAAATGGAAAGTCAAAGCTTAGAAACTTTTCTCTAACTGATCTAGATTTTGTC TCCCAATAAGGATCCAGATCAAAGAAATAAAGTTGATGAAGAATCGAGTCTAGTACCGCGTCACAAAATCCGGGCAAATC GTAACGCCAAGCAGCAATGACTCCATGAGGTTTCTTGAGAACCAACTTGACTTGTTCATAGAAAGTTGGAAGGTGAAACC AGTGGAGAGCTTGGGCAATGGTCACAAGGTCTATGGTTCCCTGAGGTGCAACTATTTGTTCAAGCTCAGCCAAAGACATG GTTGGAGGTGTATACTCATACCGCACATTGGATATTTTTTCTGCAAATTCAAGCTGTTTCTCACTGGCATCCGTAGCTAT CACATTCTCGTATAGTGCAGCTAACTGAAATAATTACCGATTAGTTTTGGTCCAAGCAAAAGCTATTCGGGGATAAAAAA ATTGTACCCTCTTTGTGTGTGTGAATTTGATAAATAAAGCAGAATTCCTATATTATGAATGTAAAAGCTAGCATACAACA CAAACTGCAGAGTTAATTATTTTTATAAACTATACCGTTTGTGGTGATTTTAAACAACCTGCATGTGTCGCCAGAAATAC AATTGACATTTCTTTTCCAAACATGCAAATGCAAAGCTGACTATGGTGAAGCGTAGAAGTTTCTAAAACAGTGCAGCTTT TAAGGATCGAACACTCATACGTTCAGATTACCACTTTTTACCATTGGGACTGGCACTTATTGAATCTAATAAAGTATAAT GTGAATGGTCTTCAACTCAATTCATGAAAATATATAGTATACTTTGTACTCGTTTGGAGGTCACGATGATAAAGCATAAT ATAATAAGAGAGTTGGATAAGGCCACAATTGGATTAGCAAGATAGCCACTTACTAATCTTATTATCGTGCTCAAGGAGAT AAGTGGAAGAGTGGGAGGATTGAATTCGGAGTAGGGGCATATCCAAGAATATTTTTATTGGGGGCCGAACTAAAAGACTA AATAAAATTATCATTGAATATTATATAACCTTTAAATAAGAAAAAATTAATTTAAATACAACTCTTAATTTTTTTTGTAG TACTAAATTTATTTATTATTGTATCAACGATGATTTTTTCCAGTAATTTCTCTCAATATATACAATTAATAAAAAAATTA TGAGAAAATCATCTTCAATCTTGTTGCGAAGCGGAGTCTTGGAAACTTTCACTGCATAAAAATTTCACTCTACGGATGTT GTTGAAACAGGAAGTGCCTAAACAAGATGTACCAATTTATTAACAAGGGAAACATCTGGACATTTTCCTAAATTAAGATC TCGGGAAACATATGAATGATAATGTCTTAGCTGAAATAGAAAATTCCTTTTTTTCAGCTCAGACAAATCATCTGCATAAG ATTTCTCAACAAGCTTACAATTTTTTTTCATTATCAAATAATTAAAAAAAATTCCTTAGGATTTAAAGTTAAATTAAGCA TAAGAAGTTTCATTGTCTCTGCATTGAATCTTCTGTTTAATTCACACTATTGCAAATCAATTGCATAATAAAATACTTTT TTTTTTGTTGTTTTCTCTCTACATATATGATTGACTTTTTATCTTATTAAGAAAATATTTAATTTCAATTGTTAAAATAT AAAATAAAAGCTACATTTAATCAATCTTTTTTTTAAGAATGAAGTTCTGTGATAATTGAGAGTTCTATAACAACAATAAC AAAAACTTTGGGACCAAACAACAACACATAAAAAATCTACATAAAATATTTATAGTCGGTAAAATTTTCAAAATTCTTAG GGGTTGTAGCCCTGCAAGCCCCTCCCTAGATACGCCTTGATTAGGAGATAGATGTGACTCACAGATTTGGCAGCTTGGCC GTTTCCGGTGGCAACATCCCAAGCTCGGTGGTGAGAGGGAGTTTTAGAAGCAATGAATTGGAAGAGTTGTGGAGGATAAC TTGGTCTTCCATCTACATATTGCTTTGCCTGTTTCTCAAACAGCTCTGCCATTTCTTTTGAATCTTTGATGATGATGATA TTCTTCTTCGATCAGTATTTAATTTGTAGATGAATCATCATGCACGTTTTTAAATTAAATATGCTCACCGACACATTCCA G
CDS sequence (LotjaGi6g1v0024100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATGAGGTTTAGAGCTTGCAAGCTTTATACTTCTTGCCTTTTGGCAACTTCTAAATTGATATCCACATCTTCTTC AGCTGTCCCTCAAATTCCAATTAGGGTTTTTCATTGCTTTAACATCCCTCAATCTCATGGCTGCAAGAACAGCTTTCTTT TCTCAAGACCATACATGTCAGCCTCTTCAGCTCTTTTGGCCAAGGATGAGGAAGTGAGAGGTAAAGGCATCGGATTACTC AGAGCAGTTGAAGACAAACATGGGGGAGTAATTGTAAACATGGAGGAGCCTATGGATTCCTTGGTTTTTGCTTCTTTGTT AGAAGCTTCATTATCAGAATGGAAGAGACAGGGAAAGAAAGGAGTATGGATCAAGTTGCCCAGAGAACATTCAAATCTTG TGCCCTCTGCAGTGAAGGCTGGATTCAGATACCACCATGCTGAACCTGACTACTTGATGCTTGTAAACTGGATTCCAAAT ACTCCTGACACCCTTCCTGCAAATGCTTCCCATCGCGTTGGTATTGGTGCTTTTGTCATGAATACCAATATGGAGGTGCT GGTGGTTCAGGAAAGTAATGGCAGATTCAGTGGCAAAGGAATATGGAAATTGCCAACTGGAGCTGTAAATGAAGGTGAGG ATATTTGTAGTGCTGCAGTTAGAGAAGTCAGAGAAGAAACAGGGATAGAAACTGAATTTGTTCAGGTTTTAGCATTCAGG GAAGGGCATAAATCTTTCTTCCAGAAGTCAGACTTGTTCTTTGTTTGCATGTTGCAACCTCGCTCCTTTAACATTCAGAG GCAGGTTTCAGAAATTGAGGCAGCTCAGTGGATGCCAGTTGAGGATTATGTAGCCCAGCCTTTTGTCAGAGAAAATGAGC TATTTGACTTTCTTACAAAAATATGCTTAACAAAGTTGGATGGGAAATACACTGGCTTTTCTAGCCGACTTACTAGCACA TCCTCTAGCAAGAAATCCTATTTGTACTTCAACCACAAGGATGGTGGCCGCTTGTTAGCTTCCAAACATGATCAGCATGC TTGA
Protein sequence (LotjaGi6g1v0024100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMMRFRACKLYTSCLLATSKLISTSSSAVPQIPIRVFHCFNIPQSHGCKNSFLFSRPYMSASSALLAKDEEVRGKGIGLL RAVEDKHGGVIVNMEEPMDSLVFASLLEASLSEWKRQGKKGVWIKLPREHSNLVPSAVKAGFRYHHAEPDYLMLVNWIPN TPDTLPANASHRVGIGAFVMNTNMEVLVVQESNGRFSGKGIWKLPTGAVNEGEDICSAAVREVREETGIETEFVQVLAFR EGHKSFFQKSDLFFVCMLQPRSFNIQRQVSEIEAAQWMPVEDYVAQPFVRENELFDFLTKICLTKLDGKYTGFSSRLTST SSSKKSYLYFNHKDGGRLLASKHDQHA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | - | – | |
| PANTHER | 1 | 338 | 338 | 2.8E-188 | – | |
| SignalP_GRAM_NEGATIVE | 1 | 28 | 28 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 28 | 28 | - | – | |
| PANTHER | 1 | 338 | 338 | 2.8E-188 | – | |
| Phobius | 1 | 28 | 28 | - | – | |
| Phobius | 10 | 21 | 12 | - | – | |
| Phobius | 22 | 28 | 7 | - | – | |
| Phobius | 29 | 347 | 319 | - | – | |
| Gene3D | 78 | 163 | 86 | 1.5E-29 | – | |
| Pfam | 80 | 158 | 79 | 7.5E-31 | ||
| PRINTS | 130 | 148 | 19 | 6.0E-9 | ||
| SUPERFAMILY | 138 | 293 | 156 | 4.06E-30 | ||
| PRINTS | 152 | 168 | 17 | 6.0E-9 | ||
| PRINTS | 168 | 186 | 19 | 6.0E-9 | ||
| ProSiteProfiles | 170 | 302 | 133 | 16.238 | ||
| Pfam | 171 | 288 | 118 | 2.9E-21 | ||
| CDD | 171 | 302 | 132 | 2.29965E-64 | – | |
| Gene3D | 172 | 302 | 131 | 7.4E-33 | – | |
| ProSitePatterns | 207 | 228 | 22 | - | ||
| PRINTS | 256 | 280 | 25 | 6.0E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi6g1v0024100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…