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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0090500 |
| Transcript ID | LotjaGi6g1v0090500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan 1,3-beta-glucosidase; TAIR: AT4G39170.1 Sec14p-like phosphatidylinositol transfer family protein; Swiss-Prot: sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A; TrEMBL-Plants: tr|V7D1X4|V7D1X4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0090500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:19384524..19389829) extracted from Lotus japonicus Gifu genome v1.2.
CCCGACTAGCAAAGTTTTCTATTTCAGTTTACAAACTGCATGTCCCTACCCTTTCCCTCTCTACAAAGTTGTTCTTTTCT TCCATCCTTATTTCACTTGGTTTCTCTTTTCAACATAACAGAAGTATTCTTTTATCATTGTCTGTTATTATTATATTTCT GTCTTCCCTCCATCAATTGAGGAACTGAGAGAAGCAATCCCAAAACCCTTCTCATGTTTATTCTCAAACTTGTTCTTTTC TTCCATCCGTATTCCACTGGCTTCTCTTTTCAACATATAACTCATACATTCTTTTTTTCATTATTATTAACATTATTTTC TCTTTTCCCTCATTAATTGAGAAATTGAGAGTGGAAGCAATCCCAAAATTCAAATTACCTTCTTCTCATGTTTGTTCACA AAGTTGAATTTGGTCTTAACTGGGTGATAAGGAAGGAATTGCACCGTTTCACTCCAAGTGCAACTTTGGCTTTGAGTGCT TTTGAAGCTCTAACTCTTGATGGGAATTGCTTTTACCAAATGGACGTGCACATTCTTATTTTGTTGTTGTCTCATCATTT CTGTAGTATATTCAGGTAAGGTAAATTTCACTAACTTCAATGCTTCACACCTTATCAGTTATTTTTTCTTTTCAGACAAT GTTATGAACTCAATGTCTTACTTGCTTTTTTGTTCAAGTGGAGGGGTTACATGGGGGTTCTAAAGTGAGAGGAGTGAACT TAGGAGGCTGGCTTGTTATTGAAGGTTGGATTAAGCCTTCACTGTTTGATGGCATTGCCAATGGAGACATGCTTGTGAGC CACTACAATTTTGTTTCCTCAATTTTTCTTTGAAATAGTGGATCCTTTTGGGGTTTCAGTGACTTATCTGGCTGATTCAA TTGTTGACTTTTAAAAATGTAGGATGGGACGGAGGTGCAGTTGAAGTCGGTGACGTTGGAGAGGTATGTATCTGCAGAGA ATGGTGGAGGAATGAATGTGACAGTTGACAGGGATGCCCCATCTTCATGGGAAACCTTCAGGGTAAGATGGCAATTGTAA ATCAATGTTTTTCTGATTTGATTTAATTTGAAATCAGTCCAGTTGCTGAAAACAACACTTGATATCTACTTGTAATAATT TTGTTCCAGAATTATTCTATCCTAATTACTATATTTAACTATCTTTAAGTATTAGCTCCTCATTATTTCTTTTTTTATAT ACTTTCCTAAAAAACCTTTAACTAATATATAAACAACACCTAAGAGATGCTTCTTCTGATTCAAACAACTAACAAATCAT TGTCATTGAAGATAAATTTTACCTTATCCAGTGAAACACTTCATTTTCTTTTCTTACTTGGTACATGTCTATCAGCAGAT AATAGTTTCAGTGCATTAGAGTAGACCAAAAGGATGAAATTCTAGTCTTACAAATTAATTTTATGAAATAATATAAGTAA AAAGTAAGTGATATGTTGTATTACATTCTACTCTTTTATCCCGTTTTCAGTGAATTTTAGGATGATATACTAGTAAGGCA CGACTCTTTGGTGATAGTTGTTTTGGAGGAAATCAGACTAGCAGCCGTTATTTTAGATTTACTTAAGAGTTGCTTTCAGG CTCTCTAGTCCTGGTCTGTTCTAATACAAGAAAACTGTATGCTAGTGGCTGTAATTCTAGACTGGCAGTTGGCTGTAATT CTTGGCCAGCTGTATTTTTTCATTAACATCTCTCATATGCTATTATATCTTGGGACTTGGGAGGGTGAGAGTTTCATGTG TAGCTGAATAAATATGGTAAGAACCAGTAGCTTATTGGAACTTCAAACGTGATGATGGAATTGTATGATTTAAGTTGCTA GAGTCATGTGAGGAAATGTCCAAGTTATAATCAGAAATTGTCCTTTTTCCTGTTGTAGTTATGGAGAGTATCTGAATCAG AATTTCAATTCCGTACCTCTGGTGGCCAATTTCTTACATGTGATGGTGGAGGGTGCACTGTCGCTGCGACAGCAAAATCA GCTTCAACATCAGAGACATATGAAATTGAGCGCAATGAGAAAAGCAGGATTCACATCAAGACAAAAAACGGGGCGTATCT GCAGGTATTCATCCTTCTTGTTTCTGCTACACTGGAAGCCATTTGTTTACATGTAAAATATGATGATGTTCTTCTACTGG ACTCTTTTATTGTAAAACCGCATGAGATATGTTTTTATGAAGAATCCACCATTTCAGTCTTTCTGTAAAATATAAGTCAT TTGTCCACCATTTTCTTTAAGATGGCATGTCCATTTATTCTACCGCATAATATCATATTGGCATTAAACTTTTAACAGAT TCATATGATTGATAAGACGACTGTTTATAGGCTACCACAGGTGGTCAGCTAACAGCAGACTATCCAGACACACCAGGATG GGATAACAATGCTGCCACCTTTGAAATGATAATTGTAGCAAATTACTTACGTGGAGATTACCAGCTAGCAAATGGATATG GGCATGATCCCGCAAAAGATGTTCTTAAGGTAAACCATATGTTGTAAATATTCTCTACATCACGCCTTCGCTGAACATGA TATTTTTTTCACAGAATTTATTCAGAGTGCGTGTTTGGAAAACCTCCTACAATTGTTTCTGAAGCCATAATCAATTTTGG GGAGAAGTTATGTGAGTAGCTTCTGGGTGCCATAATTGATTATGAGGAAAGAAAGTTGATCCAAACTTGCTAATAGACTA TCTTGTTGCAAATTTGTGGAGGCCAACTGTGTTTAAACATTTAGTGTTGACATTAGATTTTTTTTTCCAGTCACTGAAAG TAATTGTAGTGTTGTGCACATAGTTTTGTATAACATCACTTTTCCAACTTATCTATTTCGTTTATGCAACATATTTTCTA ATGGAAACCATCACAAACAGAATACAAAATAACCAGATTGTGTTCCCAGTTTATTGTTCACCTTTTTGTAACTGCAGAGA CATAGAAATAGCTTTATCACTATAGAGGATTTCAAATTTCTAAATAAACATGGAATAAATACTGTGAGGATACCAGTTGG TTGGTGGATTGCTTTTGACCCTGATCCTCCAGATCCATTTATTGGAGGAAGTCTTGAAGCTCTAGATAATGCATTTTCAT GGGCACAGTAGGTTTTACTTTTACGTACTATCTTCAATGTTTTGAACACGATTAAAACTTCATTTTTCCTTTAGACAACA TGCCTAATTATTATGTTGCAGAGAATATGATACAAAATGCATAATTGACCTTCATGCTGCTCCTGGTTCCCAAAATGGAA TGGAACATAGTGCCAGCAGAGATGGATTTACGGGCTGGCCGACTTCTCCGGATTTCATTTCAGAGTCATTACATGTTATT GAATTTTTGGTTTCTAGGTATGTTTCAAGTTTGCAAATATATATATAGAAATTGTTCTTGTTATGGAATAAACAGCTTCC ATGACCATGCACCCTGGAATATTGCTTTGGAGATAAAATATCATGCTTGTCGTAATTTCATCCTCTAAATATATTTAATT CAGCTCTTTTGCAGTAAGAAGATTATTGTTTAACACCCAAACACTGAATTTAGATTTATGAATGGTGTCCAAGTAGGATT TTCATGCAAAATTAGAAGGCATCATTCAGCTTTTGCTTCCTTTAAAATAATTCCCCCTTTTATAATTTTTTACTGTCCCA TTTCTTTCTAGGGTAGTACACTAGTACTGATATGAATTTCATCACAAAGAAAGAATAGTCGTTATTTTTTTCTCTCCTAA AGTTGCTTCCTACTATGAAGTGGCAATGGCCTTTTCTGTTGGATGCTATGAGCCTATTTTGATACAGACTTGTTGGAGTT TAGTGGAGCTTATCTACTAAAAATGCTTTAGATAAGCTCCAGTAAGTTCTCTTTGGTTTGCATCCAAATGGGTTCTAGCA GATTGGAACAGCTTGACTCTGTCTCCGTATACGAGATTTTAGTCCCTTCTCTGGCTTTATGGTAAAGCAATGTGAATCTG TGTTTTGAACCTACTGAGTACTGAGTAAACATTCTCATTTGCAGATATGCAAGACATCCTGCGTTGCTGGGAATCGAGCT TTTGAATGAATCATCTGCTCCCGCAGTTCCATTAGATACTTTAATTTCATACTATAAACAGGGCTACCAAATTGTTCGGA AACACTCGTCATCAGCTTATGTGATAATCTGCCAGAGAATTGGCAATGCAGATCCTATGGAACTTTATCAAGCCAACATA GGATCTCACAACTTAGTTTTGGATTTACATTTCTACAATCTCTTTGACACATTTTTTGTTAATAAGAGCGCTGAGGATAA CATACAGTACATATACAAAAGCAGGGAAGGTCAATTGCAGGCCTTGAACAATTCAAATGGTCCACTCGTTTACATTGGTA AGGCAACTCCCCTTAATGTTTGTTTGTAGTGCATTGGATGCTTCACAATTTTAAACCAGTTATGATACTTTAGACACCCA AACAATACAGACACCCCCACATACACCCTATTTTTCTCTCTACATACACCACATTTTTTCTCCATCTCTTTTTATCACAT CACATTATATATCACATTCATTACTTCTCTCTCTTAACTTCCTTTCTCACTCTGGGTGTGTACCCAACATTTTCCTGACA TGCATGAAATAATTTGGTGAAGTCTTCTTTTTATCTTAAGGTTGATATAACTTGAAAGCTTGTGCTTATTTCAGGAGAGT GGGTGAATGAGTGGAGTGTGACAAGCGGATCACAAAAAGATTATCAGGACTTTGGAAGGGCGCAGTTAGATGTCTACAAT GAAGCTTCCTTTGGATGGTGTTATTGGACTATAAAAAATGACAGGGTGCATTGGGATTTTGAATGGAACATTAGGAACAA CTATCTTCAATTAGGTAAACAATACAGATTTGGTGGAACACACACACTATTGCATATACATTTATGATATTTAAAAAAAA ATGATGCCAGCTATTTATCTTTGCAGGCAACTCACCCAGCAAACAGAACTTTATCACTTTAGGATTGTTAGGAATAGCAT TCACCTGGTTTTCTCTTCTTCCCTTTTTATGAAATTTCTTAAATGGCTGAAAGCATATTTGGTGCAGCTATATATATTTT TTTAATATACTTTGCTATTTTGTTCACATTGTTGGAAATTATAGAATGCAATAAAGTTGGGTGTGTGCCAGTACCACTTC ATATATATGTATGCACTCTCAACATGCAAAAGGCTCAATTTTCAGAGCGGTATTTTATGCAAATAAGAGTGATAAGCTTG ATATCCAAAGTTACATTCCATAAATC
CDS sequence (LotjaGi6g1v0090500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAATTGCTTTTACCAAATGGACGTGCACATTCTTATTTTGTTGTTGTCTCATCATTTCTGTAGTATATTCAGTGGA GGGGTTACATGGGGGTTCTAAAGTGAGAGGAGTGAACTTAGGAGGCTGGCTTGTTATTGAAGGTTGGATTAAGCCTTCAC TGTTTGATGGCATTGCCAATGGAGACATGCTTGATGGGACGGAGGTGCAGTTGAAGTCGGTGACGTTGGAGAGGTATGTA TCTGCAGAGAATGGTGGAGGAATGAATGTGACAGTTGACAGGGATGCCCCATCTTCATGGGAAACCTTCAGGTTATGGAG AGTATCTGAATCAGAATTTCAATTCCGTACCTCTGGTGGCCAATTTCTTACATGTGATGGTGGAGGGTGCACTGTCGCTG CGACAGCAAAATCAGCTTCAACATCAGAGACATATGAAATTGAGCGCAATGAGAAAAGCAGGATTCACATCAAGACAAAA AACGGGGCGTATCTGCAGGCTACCACAGGTGGTCAGCTAACAGCAGACTATCCAGACACACCAGGATGGGATAACAATGC TGCCACCTTTGAAATGATAATTGTAGCAAATTACTTACGTGGAGATTACCAGCTAGCAAATGGATATGGGCATGATCCCG CAAAAGATGTTCTTAAGAGACATAGAAATAGCTTTATCACTATAGAGGATTTCAAATTTCTAAATAAACATGGAATAAAT ACTGTGAGGATACCAGTTGGTTGGTGGATTGCTTTTGACCCTGATCCTCCAGATCCATTTATTGGAGGAAGTCTTGAAGC TCTAGATAATGCATTTTCATGGGCACAAGAATATGATACAAAATGCATAATTGACCTTCATGCTGCTCCTGGTTCCCAAA ATGGAATGGAACATAGTGCCAGCAGAGATGGATTTACGGGCTGGCCGACTTCTCCGGATTTCATTTCAGAGTCATTACAT GTTATTGAATTTTTGGTTTCTAGATATGCAAGACATCCTGCGTTGCTGGGAATCGAGCTTTTGAATGAATCATCTGCTCC CGCAGTTCCATTAGATACTTTAATTTCATACTATAAACAGGGCTACCAAATTGTTCGGAAACACTCGTCATCAGCTTATG TGATAATCTGCCAGAGAATTGGCAATGCAGATCCTATGGAACTTTATCAAGCCAACATAGGATCTCACAACTTAGTTTTG GATTTACATTTCTACAATCTCTTTGACACATTTTTTGTTAATAAGAGCGCTGAGGATAACATACAGTACATATACAAAAG CAGGGAAGGTCAATTGCAGGCCTTGAACAATTCAAATGGTCCACTCGTTTACATTGGAGAGTGGGTGAATGAGTGGAGTG TGACAAGCGGATCACAAAAAGATTATCAGGACTTTGGAAGGGCGCAGTTAGATGTCTACAATGAAGCTTCCTTTGGATGG TGTTATTGGACTATAAAAAATGACAGGGTGCATTGGGATTTTGAATGGAACATTAGGAACAACTATCTTCAATTAGGCAA CTCACCCAGCAAACAGAACTTTATCACTTTAGGATTGTTAGGAATAGCATTCACCTGGTTTTCTCTTCTTCCCTTTTTAT GA
Protein sequence (LotjaGi6g1v0090500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGIAFTKWTCTFLFCCCLIISVVYSVEGLHGGSKVRGVNLGGWLVIEGWIKPSLFDGIANGDMLDGTEVQLKSVTLERYV SAENGGGMNVTVDRDAPSSWETFRLWRVSESEFQFRTSGGQFLTCDGGGCTVAATAKSASTSETYEIERNEKSRIHIKTK NGAYLQATTGGQLTADYPDTPGWDNNAATFEMIIVANYLRGDYQLANGYGHDPAKDVLKRHRNSFITIEDFKFLNKHGIN TVRIPVGWWIAFDPDPPDPFIGGSLEALDNAFSWAQEYDTKCIIDLHAAPGSQNGMEHSASRDGFTGWPTSPDFISESLH VIEFLVSRYARHPALLGIELLNESSAPAVPLDTLISYYKQGYQIVRKHSSSAYVIICQRIGNADPMELYQANIGSHNLVL DLHFYNLFDTFFVNKSAEDNIQYIYKSREGQLQALNNSNGPLVYIGEWVNEWSVTSGSQKDYQDFGRAQLDVYNEASFGW CYWTIKNDRVHWDFEWNIRNNYLQLGNSPSKQNFITLGLLGIAFTWFSLLPFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 9 | 20 | 12 | - | – | |
| PANTHER | 11 | 514 | 504 | 3.0E-234 | – | |
| PANTHER | 11 | 514 | 504 | 3.0E-234 | ||
| TMHMM | 12 | 31 | 20 | - | – | |
| Phobius | 21 | 25 | 5 | - | – | |
| Phobius | 26 | 513 | 488 | - | – | |
| SUPERFAMILY | 34 | 504 | 471 | 1.35E-82 | ||
| Gene3D | 53 | 188 | 136 | 2.5E-20 | – | |
| SUPERFAMILY | 69 | 185 | 117 | 2.18E-24 | ||
| Pfam | 86 | 176 | 91 | 1.9E-5 | ||
| Gene3D | 189 | 515 | 327 | 4.0E-75 | – | |
| Pfam | 226 | 488 | 263 | 3.2E-24 | ||
| Phobius | 514 | 532 | 19 | - | – | |
| Phobius | 533 | 533 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Biological process | Actin filament organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. | ||
| Molecular function | Protein binding, bridging | The binding activity of a molecule that brings together two or more protein molecules, or a protein and another macromolecule or complex, through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way. | ||
| Molecular function | Actin filament binding | Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits. |
Expression pattern of LotjaGi6g1v0090500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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