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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0092300 |
| Transcript ID | LotjaGi6g1v0092300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ribosomal RNA small subunit methyltransferase F; TAIR: AT2G22400.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q5ZLV4|NSUN2_CHICK tRNA (cytosine(34)-C(5))-methyltransferase; TrEMBL-Plants: tr|A0A0B2SJ66|A0A0B2SJ66_GLYSO tRNA (Cytosine(34)-C(5))-methyltransferase; Found in the gene: LotjaGi6g1v0092300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:19941324..19949719) extracted from Lotus japonicus Gifu genome v1.2.
AAATGGGTAAGCAAAGTTGTGAAACAAGTGCAGTGAAGTGAAGTGCGACTCATTTTAGCACCGAACCAGTCCAGTGCAGT GAAGTGCGTGCGGCAATTGCGCTCTGAAACTGGAACGCCACCATGGGTGGAGGAAAAGGAAAAGACCCTACCTGCTCCAC TTTGGCTATTCAAAACCCTGCTTTCGATCACTATTACAAGGCAAGATTGAATAACAACGTCTATTTCTTATCCAATAAAT ATCATTTCTCTTTGCTCATTTCAGAGTCATTTTCTTTTCACCAGGAACAGAACATCGTGTCCCCAGAAGAATGGGATTCA TTCATGCAAGTTCTCACTACTCCATTGCCCGCAGCATTTAGAATCAATTCCTGGTTTGTTTTTATTTCTTCACTCTATCG ATTCCTCACCTAGTTAATACAATTGTGTAGAAATAACACTAACTTACTAATGAAATAAAGTACATATTAGAAAATTAAAC AATAATTTTAGATATCAATGTTTCTTGTCACAACCTTGTAGCACTTGAAAACAAACTGAGCCAGTGTAAATTCAAATATG GATAGTAATACTATTCAACTTCAATTAATCCACATTCATTCATCCAATATGCATTGATTCATTGTTGATTTTTTTTGTTT GTTTGATGATTCCAGCAGCCGGTCTTCCGCAGATGTCCGGTCTCAACTGGAGAATGACTTTGTACAGTCTCTTCAGGCCA AGGTAAGTCACTAATAGCAATGCTGGTAAATTAATCATGCTGCTGCATTTTTTAGGTGCTGAATTGTTATATATAGGTTG TTGAAGAGGATAGTCATACAGAGGCACTTAAACCGTTGCCATGGTATCCTGATAATCTTGCTTGGCATTCAAATTTTTCC CGTATGCAGCTCAGGAAGAATCGAACACTTCGAAGGTAAATACGTTATGATATACGGGTGTGTCTGAATTCATAGCATGA ATTGTACCTATGGAGTTTCGCATTGGATATGTAGTTGTAAGTTTCTATCAGTCCAAACAGTTTATATAGATGCATTATGA TTTTACTTTTGGTCATTACCGTTTTCTTACTTTGATGGTCTTTGCTTATGACTGTAGTAGGATTGGTAGGTGCATTTAAT TATTTCAGAATGCATGATTCTTTCCTACTACTAATTGAAATTGATTATCTATATAAGTTAGTTCTTCTAACTAATGTTTC AATTCCTGCTTCTTATTATGTTAATCTCTCAGGTTTCATGAATTCTTAAAGCTAGAAAATGAACTTGGGAATATTACGAG ACAGGAAGCTGTCAGCATGGTGGGCGAGTTTACATACTGTCTGACACTCGTCATGATCATACAGGATCATTTGCTTTTGT TTTGGAAATGTGTACGGTTTAGTGCATGTAGATTAGTTTACACTCTTTCAAGAAATTAATTGGTGCAGACAAATGTTTGT TTGCAATACAGGTGCCTCCTATGTTCTTGGATGTACATTCAAATCATTTTGTTCTTGATAGTAAGCAACTTACGCTGCAC CAAAATACTTTTTCTCATTATCGATTGATCTTTTCCTATTTTGGTTATTAGGAATGCTGATTTCAGTGTTCTAACTACTT TGCTTTTACATTGCTTCTATTCAGTGTGTGCGGCACCAGGTTCAAAAACATTTCAATTGCTTGAGATTTTACACCAATCA TCTAAAGCTGGATCACTTCCTGATGGAATGGTTTGTGTCTCTATCATTATGTAATGTTATTTTCCAGACTAAATATTTTT CTGATTATGACCTGTCCTCATCAGGCTTCATTTGCAAAATTTATTGACTAGTCTTTGTTTGATAATTAGGTTATAGCTAA TGATCTAGATGTCCAGAGATGTAATCTTCTCATATACCAAACAAAAAGAATGTGCACAGCCAACCTAATCGTCACTAATC ATGAAGCTCAGCATTTCCCAGGATGTCATTTAAACATGCATGATGGTACAATGGAGGCTGATGAACATATCACCCAACTG TTATTTGATCGTATTCTGTGTGATGTACCATGCAGTGGAGACGGTACATTTCGTAAGGCACCTAAGCTCTTGAATAAATG GTATTCCTTCCATCACCACATTCCTTTCCTTTTTCACTTTTAATCTATTCTATTCAGAACCTAAGCCTAATATTGCTTTT ATGCAGGAACACAGGGACAGGAAATGGGCTTCATAACCTACAAATCATTATTGCCATGCGAGGTACGTTTCGATTGTTGC CTACCTGCTCTTGGGGAATGGGGATTGGGGACTGACTTTTTTAGGCTTGATTTGATTTCTCTTTTAATATGTTATTAATG CAAGACAATGAGTTGACTGAATCTTAGTTTTTAGTTTATTTGGTAAGGAAGTTGTATCATGCTGTTAAGAATGCTGTCAT TTGGTTAAACGAAAATTCAGTTATTTTTTAATTATGATAATGAAAATAGACTTCAGTTTATTGGAGAGGGAAGTCATATT GATGATGAAAAGCATTCTTAGCACCAAGGAATCGAACCATAGTGATATATTGATCAAACCCTTGAATTGTTCATTTCTCT TAAGATCTTTTTAATGTTTATTTTTAGTTTTACACACGCCTATTTTTGGGCGACCGACATCCATTATGTGGCATAGGATT ACATCCTGTATAAAATTTAATAATATACTGCTTCTACGAATAACTAATTCTGCATCTCTTTTGAGACGGGGACCTTTTAT CATGATGTCTGCTCATCATATTGTATTTTTTTAGTGTAAATTGGCTGCCTCTTGTGATTTGATTCTAAAATTTATAAAGA TGGTACTGGCCTACTAAGATCAAAGTCCTGCTATTTATCATCTTAATATATATGAACTAGGGTTAGTGTGACTGTGACTT GACTGGTAGCATTATTTTAGCAAATTCAGCTGCCTTTTTTTAATTTTCTCAGGTGTATCCTTACTTAAAGTTGGTGGAAG AATGGTTTACTCAACCTGCTCAATGAATCCTATTGAGAATGAAGCTGTCGTTGCAGAGGTAATCAGCCTTGAATGCTCTA CAGTATATGGTTCCTAGCCATCCTAAGTAGTCTTTCCGTTGTAGGCTTTGTAAATGAAGAGTTTTGCTTTCTTAAAATCA AGTAAATAACTCATGTATTGTCATATGAATTTGTTGCCTCCGTTGATGAAGTCCCTCACCCTCCAAATTCTATATTTTGA AATATCAGATCTCAATTGCCTATGTTAGATATCTGGCTGGTAACATTTTTTTATGAAACATGGGCTTTGATTTGAAGAAA GTATTTGACATCAAATTATATTTTAATAGAAGATAATTAATGGAATAATATGGTTTTGGACTAGTAACTTATCGATAGTT CAATTCATTACTGGCACTAATTGATGGATAACAGTTCTGGAGCAAATTATCAATGATCAAATTCATTACTTGGACAATCT TATCCTACATTTGACTTCCTACTTCTGTTATTAATATAATTTTCCATTCGTCATTTTACGTTGCCTATAATAAGATCTTC TTTCTAAAGAGATTCGATTCGGAACTATGATATGTCCAAGGTCCAATATTGAAAGAATTTCAGAGGTTTTCCTTGACTTT GTCCCAAGTTTTCTGTGGTGGTGTGAACATGAGATTACAAAGGCCAAATTCCACAAGATATTACTGCTTTATAATTAGTA TAAAGCATACAATGAGTTTTCTTCCATAAATTAAAAAGATGCTTTCAAGTTTATGTTTATTTTTTTAGTAATTTATAAGG AGAGGAGCTGGCTTAATTCATTCCCCCTACCTTACTTTTCTAATCAATTGCAGGTTTTGCGGAGGTGTAGAGGGTCTCTG GAACTTGTTGATGTCTCTAGTGAACTTCCACAACTTGTTCGTCGACCAGGTCTTAAGAGATGGAAGGTTTATGTTTCTTG TGACCATGTGTCTTGAGTTGCAGAGTTTTGAAGATAATACATGTAATGTCAAGAAACAGATATCTAGGTTGGCTTACACA TGGCAAAGTTTAGCATGTTTGTCATCTTTCGGGAATATTGGGGGGGGGGGGATGCACTCATTACTCGTAAATGAATTCTT TCAATTTTCATACACGTGTCAACTGGAAGGGTTTTAAAGGAAAGTTGTGAGTTAGGGTGTCTATTTTTCAGCATTCTCCC TCTGAAAGGTTTAAATTCAATATATTCCCATACAGTAGCTGTAGGCTGTAAAACTAGTTCAGCTCAGCTCACCAGTTATA TCTCTTACAACACTTCATTGCTTGGTTGATGTGTTTGTTTCTTCATTAAAAAGTATTATTCGTTTCCAATTGATGGACTA GGACTGTTAGTTTTCTGATTGGCTTATTGTTCTTAACTGTGTCTTGCTTGTTGATTCTTTCTAATTGGACCATTTGGATT TCCATCAAGTTATTTCCATGTGCATGGGAAATTGGGAATACATTGAATTTTAACCTTTCAGAACAGAAAATTCTTATGTT TATTGAGCTTGAATGTTTACTTCCACCAAAAGTAGTTGGATTATGTATGTAATCAAGCTCTTGTCTTCAAATCTAGAATA CTAGAACAGGTAAAATGTTTGTTATGCAGCTGTACATCTGAATGTATGATTTTGGAGATGCAGGTATTTGACAAGGGCAT GTCATATGTCTCTTGCAAAGATGTTCCCAAGTTTCGTAGAAGTATAGTTCTTCCCAGCATGTTTCCGAATGGTGGAAGCT ACCAAGATGTTGTTAAAAGTAACAGTAACTGTAATATCAGCATTGGAGATGAAATTGCTGATGATGTTAATGGAAATTCT GATGATGGTGTTCAAGAAGCGGAGAATCCCGTGATGCACGATATCACTGAGGTTTCTGCTTTGCCACTAGACCGATGTGT GAGGTTAGTGCCTCATGATCAGAACACTGGAGCATTTTTTATTGCTGTATTGCAAAAGGTTTCTCCTCTGCCAGGTAATT TCTCATATGATTTGTGTTGTTTTTTCTCTCTCTCCGAAATCCTAATAAAGAGAATTAAGGAATTTGATAAACACTGGGAA TAACTCCTTCAAGATGCCATTTTTAAACTATCTACATTATTTATGTATGTTGTGAGACATGCCTTTGCTTGCCACTATTG GCTTGTGATTATTTCCTCTTTGCAGTGATTCAGGTAAAAACTAGAAAAGACGCTGATAATCGACATGTAGATTCAGCAGA CCAGGGAAATGAGGATGCACAAGTATTGCAGATCAATCCATCAGAAAGTACACATGAAAATGTTTCAGAGACTAATACAA ATGACAATGAACCCGATTCAGCAGATTTGAAAGTTACTCCTGTTATATGTGAAGATGGGGATTCCAACGAAGCCCAAGAG CCCCTCAATGTAGAAAATATAGCAAAGATCACTCCAGGAAAAAGAAAGCTGCAGATGCAAGACAGATGGAGAGGCATTGA CCCTGTTGTCTTCTTCAAAGATGAAGTAGTTATTAACAGCATTAAGGCATTTTACGGGATTGACGAGCAGTTCCCATTCG ATGGTCACCTTGTAGCAAGAAATGGTGATACTAGCCGTGTCAAAAGGATCTACTATGTCTCCAAGTCAGTCAAGAATGTT CTTGAGTTGAACTTCTCTGTTGGGCAGCAATTTAAAATAGCTTCCGTTGGCCTAAAGATTTTTGTAAGTCTACTTTACTC TGAATTCAGAATTGTTGTTTTTGTTACTATGATAATTTAACATTTTTTGACACGCCTTACTTAAATTCACGATCTCAACA AACTATTTTATTACTCAAGTGCAAATTTTTAAGAATAAAATTTAATACTCAATGACACACAATTACCCAAATCCCAATCA GCCAGAGAATTAGAGTTTTTATGGTGAAGAAACTCAAACTAATTCTTCATATTTATGAAGTAAATTCCATAAATAAAAAT TTACTTCAAGAGGTTAAAAATTAGGCTCAATTGTACTTTCAGTTGAGCAAATGTAATCCCTTATATATAGCACTATCCTT TTCCATAACTCAATTTCTACTGAAAATCTTCACAAATTAAATAGATTATACTAGTTTAAGTCTTTCCACTCAAAATTCAC CATTAAAAGACATGAATCCTTTTGATGTCCAATTACAACTCAAACTTCCGTTTTGTTTTAAAACCTTCCACTCAAAATTC ACCACTCTTCACCAACGGTTTTGATGTCCAATCTCCGACTCGCCCAATACCCAATTTCGATCTTCCACTTCCTGCACCAG TTTCATCAACGTTCCTATGTCTCCCGAACTATGTAGTTGGACTTCTGCTGGTATTTCATCGGATAACCTTAACATCTTGA GCACCTCTTGTTACCATGTCAAAGATGAGCCCCCAAGACTCAAACTCATCAGAACTTCATATGGTGTTCTGTGACAGAGA TTTGAAATTGACCCAGAAATGCTCGCTTGAAGATCACCCTAACACCAATTTTTGCATAATCCACCTCGCTCTTTGCCCTC TTTTTTGTTATCCTGATCTGAATGCCTCCTGTCACATTCAGTTGTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCTCTGTGCTAACAGCATTCCCATTCCACCCATTTCAACTATCCTCATCATTCCCCACATTCCTCTCATTAACCACT TAAATATGATTGCCTTGGGGCCCTGTTTCCCTCGTTGCCTATATACATGAATTATAGGCTATCAGTACCCATGACTCTGT TAGTTAGTTGTTTCTATTTCTGCTTTCCTCGACTTAATTTGAAATACATTTTGACTTTTATCGGATATGAAAAACAGAAT CAGCTATGCTGCATGATTTCATTTTGACATGATTATTGGTAGAGTATAGACTATAGAATATTTACTGTAATATGTTGTCA GATTTGGCTTCTAAGAGGTGCATTTTTTAGAATACAAGGATAACCGCTTACTGAAAGAAAAACAGTTAAGATTATGATTA TATATATATAATAAATTAAGTTTTTTAAATCTTAACTTATTGATTTTTATACCAACGGGATAATAATTTTGCACCTTATT CTCTATAATGCATTTCTCATTTTAGAGGAACTATATCATGTAATGTCAAAATAGTTTGTTTAGGTTTTTTTTGTAAAAAA ATAAACCTAATTACTTCGCAATAAAAGAAAGTATTGATCTGCCCTTGACTGACAGTGAGAAATAAGTTCTTTGATTAGTT GTTTTTGTGAATAACCACGTAATGTGTACTATGTCCTTATCATTCAGGAAAGACACACATCACGTGAAGGTGCCTCTGCA CCATGTCCTTTCCGGATCACTTCTGAAGGATTGCCCCTTATCCTCCCTCACGTCACCAAACAGATTCTGCGTGCATCTCC TATAGATTTCGAGCATCTTCTGCAGTATAAGACTGTAAAATTTGCAGATTTTGTTAATGCCAAGTTTGGTGAAAGGGTTG CAAACCTAATGCCAGGCTGTTGTTTGGTAGTTCTAGGTGAAGGTATGTATCACTACCACCTTGAGAGTTGAGAGTAAGAG TGTGTTTGTTTATCCATTGGATTGGACGTGAATGTGTTTTTTCTCAATCCAACAACTTTGATCGGTTGGAAAGACTATCT TGGTAAGCCATATATATATATATATATATATATATATATATATATATATATCTGGAAAGCCAAACACACTCTTAATGCTC ATTTGTTTTGACGGTTTACGTGGTAACCTCCTTTCTGCAGGGAACATAGCTGCTCCAGAGCCCCTCCAAGTGGATGAGTC AACAATAGGCATTGGCTGTTGGAAGGGGATGGCAAGTTTGACCGTGATGGTCACTGCAATAGAGTGCCAAGAACTGCTTG AAAGGCTTTTAATTCGTGCAAACACTAACAGAATAGGACTCCTCATGCATGAGGACCAACCCTCTCATAATGTGGGAGAT GAAGAACAGCAGTCGAATGCAAAACACGAAGATGTGGAAGCTGCTTGGTGATAAAATTGAATAGTTTAAACTCTTCAATA GAGATTAATCACTCATTTCTACGTTGAGTAGTTAAACTACGTTTTAATCTTTTGTCATGGGCTCTTTTCCTTTATAGTCA TGTCTTCTTAGTTCTTACACAAGCATTTACAGAAATTAAGGCTTTTGCTTCAGCCATGAAAATTGTTTACGATTTTGTTG CTTTTCTTTCCTTTTTTGTCATGTTCTTTGTAGCAATGTGAACATCCTTCGGTAATAGAATAGTATTCTAATGCTACATT GCCCCTCAAAATTCTTACACTACATCTAATTAGTCATTTGTTGATTTCAAGTATTGAATTGTCACCCGCTTATGTATCCT CCCCCGCCGGAACCTGCAACATGAAGGCCCTACGCACCACTTGGTCAATACTGAAACCCCTCAATTGGAAGATGAG
CDS sequence (LotjaGi6g1v0092300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGGAGGAAAAGGAAAAGACCCTACCTGCTCCACTTTGGCTATTCAAAACCCTGCTTTCGATCACTATTACAAGGC AAGATTGAATAACAACGTCTATTTCTTATCCAATAAATATCATTTCTCTTTGCTCATTTCAGAGTCATTTTCTTTTCACC AGGAACAGAACATCGTGTCCCCAGAAGAATGGGATTCATTCATGCAAGTTCTCACTACTCCATTGCCCGCAGCATTTAGA ATCAATTCCTGCAGCCGGTCTTCCGCAGATGTCCGGTCTCAACTGGAGAATGACTTTGTACAGTCTCTTCAGGCCAAGGT TGTTGAAGAGGATAGTCATACAGAGGCACTTAAACCGTTGCCATGGTATCCTGATAATCTTGCTTGGCATTCAAATTTTT CCCGTATGCAGCTCAGGAAGAATCGAACACTTCGAAGGTTTCATGAATTCTTAAAGCTAGAAAATGAACTTGGGAATATT ACGAGACAGGAAGCTGTCAGCATGGTGCCTCCTATGTTCTTGGATGTACATTCAAATCATTTTGTTCTTGATATGTGTGC GGCACCAGGTTCAAAAACATTTCAATTGCTTGAGATTTTACACCAATCATCTAAAGCTGGATCACTTCCTGATGGAATGG TTATAGCTAATGATCTAGATGTCCAGAGATGTAATCTTCTCATATACCAAACAAAAAGAATGTGCACAGCCAACCTAATC GTCACTAATCATGAAGCTCAGCATTTCCCAGGATGTCATTTAAACATGCATGATGGTACAATGGAGGCTGATGAACATAT CACCCAACTGTTATTTGATCGTATTCTGTGTGATGTACCATGCAGTGGAGACGGTACATTTCGTAAGGCACCTAAGCTCT TGAATAAATGGAACACAGGGACAGGAAATGGGCTTCATAACCTACAAATCATTATTGCCATGCGAGGTGTATCCTTACTT AAAGTTGGTGGAAGAATGGTTTACTCAACCTGCTCAATGAATCCTATTGAGAATGAAGCTGTCGTTGCAGAGGTTTTGCG GAGGTGTAGAGGGTCTCTGGAACTTGTTGATGTCTCTAGTGAACTTCCACAACTTGTTCGTCGACCAGGTCTTAAGAGAT GGAAGGTATTTGACAAGGGCATGTCATATGTCTCTTGCAAAGATGTTCCCAAGTTTCGTAGAAGTATAGTTCTTCCCAGC ATGTTTCCGAATGGTGGAAGCTACCAAGATGTTGTTAAAAGTAACAGTAACTGTAATATCAGCATTGGAGATGAAATTGC TGATGATGTTAATGGAAATTCTGATGATGGTGTTCAAGAAGCGGAGAATCCCGTGATGCACGATATCACTGAGGTTTCTG CTTTGCCACTAGACCGATGTGTGAGGTTAGTGCCTCATGATCAGAACACTGGAGCATTTTTTATTGCTGTATTGCAAAAG GTTTCTCCTCTGCCAGTGATTCAGGTAAAAACTAGAAAAGACGCTGATAATCGACATGTAGATTCAGCAGACCAGGGAAA TGAGGATGCACAAGTATTGCAGATCAATCCATCAGAAAGTACACATGAAAATGTTTCAGAGACTAATACAAATGACAATG AACCCGATTCAGCAGATTTGAAAGTTACTCCTGTTATATGTGAAGATGGGGATTCCAACGAAGCCCAAGAGCCCCTCAAT GTAGAAAATATAGCAAAGATCACTCCAGGAAAAAGAAAGCTGCAGATGCAAGACAGATGGAGAGGCATTGACCCTGTTGT CTTCTTCAAAGATGAAGTAGTTATTAACAGCATTAAGGCATTTTACGGGATTGACGAGCAGTTCCCATTCGATGGTCACC TTGTAGCAAGAAATGGTGATACTAGCCGTGTCAAAAGGATCTACTATGTCTCCAAGTCAGTCAAGAATGTTCTTGAGTTG AACTTCTCTGTTGGGCAGCAATTTAAAATAGCTTCCGTTGGCCTAAAGATTTTTGAAAGACACACATCACGTGAAGGTGC CTCTGCACCATGTCCTTTCCGGATCACTTCTGAAGGATTGCCCCTTATCCTCCCTCACGTCACCAAACAGATTCTGCGTG CATCTCCTATAGATTTCGAGCATCTTCTGCAGTATAAGACTGTAAAATTTGCAGATTTTGTTAATGCCAAGTTTGGTGAA AGGGTTGCAAACCTAATGCCAGGCTGTTGTTTGGTAGTTCTAGGTGAAGGGAACATAGCTGCTCCAGAGCCCCTCCAAGT GGATGAGTCAACAATAGGCATTGGCTGTTGGAAGGGGATGGCAAGTTTGACCGTGATGGTCACTGCAATAGAGTGCCAAG AACTGCTTGAAAGGCTTTTAATTCGTGCAAACACTAACAGAATAGGACTCCTCATGCATGAGGACCAACCCTCTCATAAT GTGGGAGATGAAGAACAGCAGTCGAATGCAAAACACGAAGATGTGGAAGCTGCTTGGTGA
Protein sequence (LotjaGi6g1v0092300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGGKGKDPTCSTLAIQNPAFDHYYKARLNNNVYFLSNKYHFSLLISESFSFHQEQNIVSPEEWDSFMQVLTTPLPAAFR INSCSRSSADVRSQLENDFVQSLQAKVVEEDSHTEALKPLPWYPDNLAWHSNFSRMQLRKNRTLRRFHEFLKLENELGNI TRQEAVSMVPPMFLDVHSNHFVLDMCAAPGSKTFQLLEILHQSSKAGSLPDGMVIANDLDVQRCNLLIYQTKRMCTANLI VTNHEAQHFPGCHLNMHDGTMEADEHITQLLFDRILCDVPCSGDGTFRKAPKLLNKWNTGTGNGLHNLQIIIAMRGVSLL KVGGRMVYSTCSMNPIENEAVVAEVLRRCRGSLELVDVSSELPQLVRRPGLKRWKVFDKGMSYVSCKDVPKFRRSIVLPS MFPNGGSYQDVVKSNSNCNISIGDEIADDVNGNSDDGVQEAENPVMHDITEVSALPLDRCVRLVPHDQNTGAFFIAVLQK VSPLPVIQVKTRKDADNRHVDSADQGNEDAQVLQINPSESTHENVSETNTNDNEPDSADLKVTPVICEDGDSNEAQEPLN VENIAKITPGKRKLQMQDRWRGIDPVVFFKDEVVINSIKAFYGIDEQFPFDGHLVARNGDTSRVKRIYYVSKSVKNVLEL NFSVGQQFKIASVGLKIFERHTSREGASAPCPFRITSEGLPLILPHVTKQILRASPIDFEHLLQYKTVKFADFVNAKFGE RVANLMPGCCLVVLGEGNIAAPEPLQVDESTIGIGCWKGMASLTVMVTAIECQELLERLLIRANTNRIGLLMHEDQPSHN VGDEEQQSNAKHEDVEAAW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 51 | 806 | 756 | 0.0 | – | |
| PANTHER | 51 | 806 | 756 | 0.0 | – | |
| SUPERFAMILY | 61 | 481 | 421 | 4.05E-53 | ||
| ProSiteProfiles | 67 | 481 | 415 | 47.428 | ||
| PRINTS | 129 | 150 | 22 | 2.4E-13 | ||
| Pfam | 172 | 357 | 186 | 2.0E-32 | ||
| PRINTS | 183 | 193 | 11 | 8.7E-21 | ||
| ProSitePatterns | 272 | 283 | 12 | - | ||
| PRINTS | 273 | 285 | 13 | 8.7E-21 | ||
| PRINTS | 323 | 339 | 17 | 8.7E-21 | ||
| PRINTS | 357 | 376 | 20 | 2.4E-13 | ||
| PRINTS | 463 | 480 | 18 | 8.7E-21 | ||
| MobiDBLite | 492 | 539 | 48 | - | – | |
| MobiDBLite | 507 | 537 | 31 | - | – | |
| PRINTS | 648 | 660 | 13 | 2.4E-13 | ||
| MobiDBLite | 795 | 819 | 25 | - | – | |
| MobiDBLite | 797 | 819 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. | ||
| Molecular function | TRNA (cytosine-5-)-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylcytosine. |
Expression pattern of LotjaGi6g1v0092300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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