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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Response regulator [Medicago truncatula] gi|357463135|ref|XP_003601849.1| | 19 | ||
| – | Response regulator [Medicago truncatula] gi|357463135|ref|XP_003601849.1| | 19 | ||
| – | PREDICTED: two-component response regulator ARR12-like [Glycine max] gi|356556600|ref|XP_003546612.1| | 22 | ||
| – | Two-component response regulator; TAIR: AT4G31920.1 response regulator 10; Swiss-Prot: sp|B8AEH1|ORR23_ORYSI Two-component response regulator ORR23; TrEMBL-Plants: tr|A0A0S3RCH7|A0A0S3RCH7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0379100 | 20 | ||
| – | Two-component response regulator; TAIR: AT2G25180.1 response regulator 12; Swiss-Prot: sp|B8AEH1|ORR23_ORYSI Two-component response regulator ORR23; TrEMBL-Plants: tr|I1K8P7|I1K8P7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0379100 | 22 | ||
| – | Two-component response regulator; TAIR: AT3G16857.2 response regulator 1; Swiss-Prot: sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1; TrEMBL-Plants: tr|I1KMU8|I1KMU8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0336900 | 22 | ||
| – | Two-component response regulator; TAIR: AT2G25180.1 response regulator 12; Swiss-Prot: sp|B8B3I4|ORR22_ORYSI Two-component response regulator ORR22; TrEMBL-Plants: tr|I1M9E9|I1M9E9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0080400_LC | 22 | ||
| – | Two-component response regulator; TAIR: AT1G67710.1 response regulator 11; Swiss-Prot: sp|Q5N6V8|ORR26_ORYSJ Two-component response regulator ORR26; TrEMBL-Plants: tr|A0A0B2QVM4|A0A0B2QVM4_GLYSO Two-component response regulator ARR11; Found in the gene: LotjaGi6g1v0099200 | 19 | ||
| – | Two-component response regulator; TAIR: AT2G25180.1 response regulator 12; Swiss-Prot: sp|Q6K8X6|ORR23_ORYSJ Two-component response regulator ORR23; TrEMBL-Plants: tr|A0A0B2Q5E5|A0A0B2Q5E5_GLYSO Two-component response regulator ARR12; Found in the gene: LotjaGi6g1v0205900 | 22 | ||
| – | Two-component response regulator; TAIR: AT4G16110.1 response regulator 2; Swiss-Prot: sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2; TrEMBL-Plants: tr|I1MGI9|I1MGI9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0255200 | 22 | ||
| – | Two-component response regulator; TAIR: AT4G16110.1 response regulator 2; Swiss-Prot: sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2; TrEMBL-Plants: tr|I1MGI9|I1MGI9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0255200 | 22 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 9.09 |