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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0104900 |
| Transcript ID | LotjaGi6g1v0104900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | U-box domain-containing protein; TAIR: AT2G23140.1 RING/U-box superfamily protein with ARM repeat domain-containing protein; Swiss-Prot: sp|O22193|PUB4_ARATH U-box domain-containing protein 4; TrEMBL-Plants: tr|A0A072UYD4|A0A072UYD4_MEDTR ARM repeat RING/U-box protein; Found in the gene: LotjaGi6g1v0104900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:23102280..23113417) extracted from Lotus japonicus Gifu genome v1.2.
GAGAAAATGATATTTTAGGAAGGAAAGAAAACGCGACCAGGAACAAACACCGTCTGAACGGAGTCTGCGAAATTTCCCAA TCTTTTCAAGGAGCTGCTTGCCCTAATCACCCGCTCCCACTCCTCCTCCGGTGGTTTGCTACCGTCGCCGGCCTGAAAAC CAACCACCGCCGCCACTCTCTTGCCGGCGGCACCACCTGTGCTCCCTGACACTCTCACTCGCCAGCAAGAAGACTAACAT AGCAGAACAAGACCAAGAAGAAACCCTTTCCTGCATTCATTCACTGCTCGTCGTTTCAATCACTCAGCGAATCGAACAGA GTGCTGGAGGTAGCAGCAGCATCAGCATCAGCTTTCTCTCCACTGGTAAACCCTTTGTTTGATTGAAATGCTAACTTTGA CTTCAACTGAATCTTCGTCTTTTCGTTTTTATCTTAGTTTCTTTTCCTTGATTTTCTCGTGTGAGTTTATAACTGTGGTT TGTCCTTTTTGCAATTTTGTTAAAGGAGGGTTTGGAGTGTTGTTACTGGTTATGATTTTTTTGTGTGGTTTGAATCAAGT TCAGTTTTCGTTGAGCTGGACCAGTTTCAAGTGACACTTTTTGGATCTACGAGTTTCGATTGTTTCAACGAAACTGATTT CAAGTTATGCGGAACAAACTTAACTTTGGTTTGATAAACATTACTTGATTTGATAATAAGCTGTTTTTCCTTTTTCCTTT TAGATTAATTAGTTTTAGATGTGTTCAGTTCAGCCTAGACATGCTGCTTTAGATTCACTCAGCTGGCATTTGGATTTTGG AGTTCTAGGTAGACTGATTGATCTCAAATGCTTTGTTTAGTGCACCATGTAAAGAGTGGATATTAGAAACTGATATTGTC CGTATAAATGATGTTTAGTGCATTTGTGTGGTAGTATGATTCTATAATGTCGTATCGCTATTATGTTTGAGGGTGTGGGA TAAGATCTGATAGGAAAGGAAACATGATGCATGGTCGTGAGCAGAATGACAGAAACCCTGCTTGAAGTGGAGGGTATCCT CTCTTTTTCAGACTGACTTTTAGCTTTTAGATGTGCCCTTTCCTCTATTAGTTGGGAATTTGGAATCGCAATCTTGCTTG TCCATCTCCTTGCGACTATTCTTTACTATTCAATGGGTATCGACTCAGGAGCGTGAGTCACGTTTCAGATTTCTGAATAG CCTGGCATTTAGTAGCGGGCTCTCTTCCTTTTTTTTCTCCTTATTTGATTTCTGCATTTATTGTGATGCTCTGTTACTTT CCTTTTTAGTTGTAAATGGTCTTAAATTGACATTAAATTAGATAATTTGGTCATATTCAATATAGAAACTAATAATATAT GTTAAATCTATCAGGTAGCTTATCCAGTTCTGTGTCAATCATTGGATTATAAAGAGGATTTTTGGTTCCTTGTACTATCA AGTCTTATCGTTTCCTTCTATCATGGTCAAATAACCATCTAAAGCAAGGTTATCAAATCAGGATTTGAAGTATGAATCGG AAGACCTATTTTCTGAATTGTGAGTCAAATCGAATGTCATTATGAATCGTAAGATACACATGATTAATAATTATGCACAA ATAAAATATACCTTTAAATAAAGTAACATTTCAACATACAAATATTAGTCGTTTTAAGTCAAATAAGTAAACAAGTCATT GCATATGAATCTAAACACAAAAGGCTTCTGTGTTTTGAAAGCCAACAATATCTTTCCTCTTTTCCCTCCACCTCCCCCGT TTAGCGGCAGCTCACCTCTCCTCTTCCTCTTCTCGCCTCGCCTATCTTCTTCCTGGAGCGGCATTTTCCCACTCTTTCTC TTCTTCAGCACCCCTCCCCTCCCCATATGGGTGCAGTGGGTTTCACTATGCGGCGACACCAACAACCATAGTGGTTGCAC CATTTTCCTCCACCCTCATGACCCATCTCTTCTTCTCCGCAAAAAAAAGTACAATTCACATAGTCGGGTTTTGCAACTCA CCCCATTCCGAGCGTGTGACCCGTGCACGATGTATATCCGAATCTTGATTCCTCTAATACAGAGGCGATCACACGATTCT AGTTGTTATTCAGGGTTGAAAATGAGTCACAATTTGATCTGAATCAATATCTATCAATTTGGCATCAAATTGCGATATGA GTCGTACAATTTATGCAATTCTAACTACACTGATATTCCAAAGCAACTCAATCTGGCTTTTCTTAGTTTACTTAATATTT AATCTAAAAGTTCAGTGCCCAATCAAGATAAAAGGGGGAAGACTTGGTGCTATAAACCTCCCGCCATGTGCAAGGTCCAG GGAGAGGCCAGATCCACAACTTTGTGGATCTAATGTATTGTAGGCAGCCTAACCTTGCATTTTTGCAAGAGGCTTATTCC ATGGCTCGAACATGTGACCGCAAAGTCACATGACAACAACCTTACTGTTGCTCCAAGGAGTGCCCTCTAAAGAGGCCAAG CAAGATAAATCCACCTAATTGATTAGAAAATTGACGCTGGATGAAGAGACTAACTATGAAAGTGATGGGCTTTCTGAGTG GGGCATGGCCCACAGGTGGAAACCACTTGTGGGAATGCCGGAGGTAGGGGAGGAACCACACCCATAAAAGTAGGTTTCCC CTTGATTGGTAGACAAATTTTTCAGCAAGCCCCCTCAAATAGATGAAATATCTTTTTCTTTTTAAGTTTGTATGTAAATA TGTATTTAGTACCCATATTAATTTTTCCCCTAGTTTCTTCCGCTGATCTGGCAAGATGTTTTTTTTAATCAAGATGTCAT TGGTGCTTCCAAATCAGGAATTGGGACTTCGGAGCTTCAGTTGCATGTTGTGTCACTCCCTAAAATTGGCAGTTCAGTCA AGGACTGGACATGCAATTGATATGTTCTGAGCCAAAACTCACCAGCTAATTTATAAAAGAAAGAAATTCCAACCGAGCAT CTAAGAAGGATCCCATAAAGGTGCAAAGTTCATAACCTTTCTTATCTCCTATGCTTATTAAATATTACTTTGTATGCTCT TGGGCCCTGGCCTTTCTGTACCTGTATTAAGTAGCTTAGTCTTTCTTTTTGGAAATAAAAGGAATATTATTGGATTTGGA TGAGAGAATAGGAATGGAGGATACGGCACATTAGAGAAAAGGAAAAAGAAACAAAAGAAAAACAAACATGAAATCCCATA ACTAAGCTAAGATCGACATTTTCTTTGCATGTCTGATAGAATAAAAGCCTATGAGACTATTGACTGAGAGTGGGGCTTGA ACTTCCCAACGGAATTAGCAAGAAGAAAGTCATCACCATTTGGAGAATAAGTTAGAAACTGAATAGGATTTACTAGAAAA CACTCCAGCGTCCAGATGAGTATAAATACTGCTATCTCCTGAAGAAGATTGGTTGACAGATCTGAGCAACTGTTAATCTA ATTTTTACTTATAGGGATGCCTGACTGAGAGCCGTATGAGTATTTAAAATTTTCTGTTCTTCAGCCCAAGGATCTAATAC ATGGTCCAAATAATCAATTTTAACACATTACAAACTTGTCAATTTTTTTTCAACTGACACCAAGGTTGCTGCATAGTGAC TTGGTTGTCACAAGTTGCCGAGTTCTAGAGTACAGGAGCAAAGGCTCCATATGCCTCAACCTCTCCAAGTCATACATTGA TGGAAGGTTGAGCCTCATGCTCTAGGCTACGCATTTGACATTAATGAGATTTTCCTTTTATCATCTACATGTGTCATATA AGAATGCAATCTGTTCATTGTGTTTTGAATATAAATTACATGTGGCATGTATTTTAAGAGTAAGTCAACTACTTACTACC ATGTATATAGCTGTCATATGGGCTGACCTTGTTCAGCTTTAAGTTTCATTATCAGTCCTATGTCAGCTGGATTTGCTTGT GATGTTTGGTACATAGTTTCTGAAATTGTCAACACTGCCATACCCATAATGGGTTGATGGATTAGAAGGGGCTATAACTT AGAATTGCCAGATATAATTGCCCCCTAGTTGAACATTGATATTTTTAACCTTGGCGTGATTATGGAATTAGGATTTTGGC TTAGAGTATTGATGAGATGTGCAGTACTTGATGAAGTTTATTTCTTTTAGACTGATACCAACAAGCTTGTTGTTTATGTG TTAGCAAATCTTAGCCTATAGATAAAGCTGTTGTCAGACCCAAAAGGTGCCTTTGTGTTTCATGGTTGGCATTCTATGCC CATCATCACCCTTCTATTCCAATTAACATTTACTTCTTGGTTCATATTAGCTTTCATTTTATCGGGTTCGTGCCTCTGAA TTAGAATATAACTTGTTATGAGGATATACTTTTTGTTTTTACATGCATGCAGTGGAGGGTGTGAGAAAGAGGAGCCCGAC TAGCTGATCATATTATTCACATGTATCATATTTGGTTGTATATTGAACTGTTGTACATGAAGTTCATACCTTGGCATGTT CCTTTTGGCTCCTTTAAAGCGAGGAATTCACTATATAGAAGAAAAGTTGATCTATTGTAGCCATTGACTGAAAAATCGGT GGTTGAGATTTAAACAATTTCACAGTTTGGTATACTTTGTTTGGACATGATTATGATATCGACCCTTGACTTCCATTCAA TGGCTATGTCTCCTTACTTTTTCTTCTAATGTGTATTTATCACTTTAGAGAAGTTAAATCCAATACTGTTGTACTTAATT TTCTTTGTATCAACTAAATGAGAATAATGGAAGTGTTGGATTACAGATTGCTAGCTATTTTATTCTTTTTTATTGGATCT ACGCGCAGGTTGTTGTTGTTATTATTATTATCATTTTTATTATTACTATTATTAATTATAATTATTTTGATACAGGTGCT ATGGGGATATCATTGTTAAAAGTGCTTGTTAATAGCATATCCTCATTTTTGCATTTATCATTTTCTGGTAATATAAACTT AGAACCAGTCTCTAAGTATTACCAGAAGGCAGAGGATATACTTAAGTTGTTGAAGCCGATCATTGATGCGATTGTTAATT CTGAGTTCGCTTCTGATGAAGTGCTAAGCAAGATGTTTGAAGAACTTGCTCACACTGTTGATGAATTAAAGGAGTATGTT GATAATTGGCACCTATTGTCTAGCAAAGTTTATTTTGTAAGTGCCACAAATTCTTGACTCATAAAAGGCTTATTTATCTT AGTTGTTAATTTAGTGTATAATGAGTTGAGCCTCCATTATGGGGTGGTTATCCTTTTTGTTTCTTTATGTGCACATTAAA TTTTGGGATAAATATGTTTTCAATATATTGTTTTGTGGTTGGTGAGAAAATCATGCTGTGTTGATGTTTTGTATAGAAGG GTATAGTTATGATAGCGGTGGTGTATTCTGTTGTTTTCCGTCTTCCTCTTGCTCTCCCCACCTTTCTTCTATCATCCTTT TTCTTCTCCTTCTTGTATATTACTCGATAGTGTTTTACTCCCCAGTTAATCAATGTTTTGCTTTGTGTTTGCTTTGCACC TATATTATAATTTCAAGTTCATTTGTTTTCTTATAATTAGAAGTTTTACTTTTGGAGAATCAAAGGTTCAGGATCCTAAT AATTCGAAAGACATTATGGTGATGGTATTATGTGGTGGTAAATGAGATGTGTTTGTGATGGATGTAATGGCATTGTAGCT TGCTTGTTGCATTCAAACTGCAGCAGTTTCTATTTTCCTAATAAGAATTTTCATTCTATTATTTCATGATTTCATCACCA TTCTTTTAGTTTTGCTCATGGTCTTGCATCATCATTTTTGGAAACATAAATATTTGTGTTCTCTTGAAAATGTATAGGTT ATCTTTGCATTTAGCATCTCCAGAAATTAATTTTTTGAGTTGCTACTTACTTGCCGAAACTTAGTCCACTCCTTTGTATA GTTTTCAAAGTGATCATAATTAATTGTCTGTCTCGTTAGATTCGTAAAGTATAACATCCAATTTAACTAAGTGTATTTTC TTTTTCAAATTTAATTAACAGGTCAAATTCCTTATCTATTACCTTTGTAAAATCTAAGCGTTACAACCTTTATTCAAAAT AATCCTTTTCCATTGAATATGGCCTTTTGGTTGCCGTCTTGCTGACAGTTGTTATTATCTTATGTTACTGAGTCTTCGCC ATTCAAATATTTGGGTTCAATTAAGACATTTCTTAATATCCAAAGAAGTTCGTTTGTCATTTTTCGCTTACTTTAGAATG TCTTTGTTTCTTCTCAATCCCTCTATAATCTGTGTGATTGATGGTTGGAATCAGATTTAACTTGTCAAATGCATGAAATT AACCATGTAGATATTGATAGGTTAGTTCTTAGTGATATTTGAACTTATTAAAGAGACGATAATTGTGCAGAACCATTGGA TTGCTTCTTGTTTATTCATATAAGAAAAAGTACTTGAGATGTAGAGGTCAATCTAATGGTATAGTAATACTTGAGTTTTT TTACGAATGAAAATGATATCTGTATAGTATTTCATTTTTCCTCATAACACACATCGATATCCAGAGGTCACTCCTTCCTA AAAGATTGCTGTTCCCTTCTGTTGAAAGTTGCAGGGTTAGTGTTTAGGTAGTAGAGAGAAAAAGGAATACTTGAATAATG AAATTATATTATTGATGTGAAGGATGATGTTGGATGTTGTTAAAGAAACAAAGTACTAAACCTTATTCATAAATCATACT AAGACTAGGCTCTTTATCCTAACTAAACAAGGCAATAAATAATGAAATTAAGGAAAAATGTAAAGTAATTCTAAGTGATA ATCTAAGATCATATTTTATGATAGAATAATGATCTGGGGAGACACTTTTTAGATATTTCAACACCCAAAACCGCCCCGCC CCCCCCACCACAAAAAAATACTTAAAGCTAAAGTTTACTAATCTTTAAGCTTTTACAAATGAAACCTTTGTGAAAGAAAA ATAACCCAACAATATTAATTGAGATTTGAGACTGATCGAGCCATATTGCATCGGTTGTGAGGATATAGGTCAGAATTTGA AGCCAGACTAGACTGCATGTAGGACAAAGTTTGAGGCCAGACTGCGTCTGAGACATCAGTTGGGAGGATCAAATTGCGAC TAGGACAAATATCGAGGCCAAACTTCAATTAGGATGAAAATTTGGGCCAAATCTCAACTGGGACAAAAATTAGTACTAAA CTGTAACTAGTATAATAGTCGAACTCAGAATGCATATGGAATAGATGGGGCTAGATTGCCTGTGGGATATTCAGGGCCAG ATTGCTTCTAGGATATGGGACAAAAGCCGAGGGCTGTAAAGGCTGTGGAGATGGTTGGGAGGAGGACATGGCAATGGGAT GCATTGATCTAAGGATCAAGAGAAGTTGGGGAGCAGAAAGGTCCGCTGATAATGAGAGAAGATGAGAGGAAAAGGTGGCC GGAATTTGTGCACGCCCAATGCAAAGATTTATGGAGGTAGTGACATTATTAGCATGGAGTTCCGAATTTTAGGGAGCTTG ATTGAAAAAGAGACAAGGCATGTGGAGGATGGTATCGCTTTGATATCATTTTGAAAGTTATAAGATTAGTCTTGGTAGTG TCATTATTACTGTATAGTTTTGGATTTTAGGGAACTTGATAGCAAAAGAGTGATGGGGCATGTCATGGGGGATGGTATCG CTTTGATATTATGCTGAAAGTTATAGAATTAGTGCATGTTTGGATACATGGTAGGAAACCACAGTGAAGTCAAAATCATG GTGGGCAGCCACAAAAACTAAGGGAAAATGCACCGTGTTTACCATGATTTTGGCTCACCATGGTTTTCCACCGTGTTTCC AAAAAATGCACTCAGTCTTTTAGGTATAGAAGGAGGAAAATGTACTTTGATATTGATGTGAAAATGTATGATGTTGGATG TTAATAGAGATGACAAAGCACTAATCCTTATTTTTCCTAATTAAATACGGGAACATTAATGAAATAAAGAAAGATGGATG CGAATTATAAAAGATAATTAAGATCCATATTTTATGATAGAATTATATGCACTATATTCTTTCAATATTCTAACACCTTT GTCTACAACTTTGTGAGATGTGATTTGCTTAAAAGTGAGCGGTGTTCTTATGTTTTTGCTTGAGTTGGGTTTCTACCTGG TGTAGAAGTAGAATGCCCTTCAAAACTCTATCTTGTTGCCGAATATAACATGTACTTGTTCCTTTTGTTGTGGCCTCATC TTTTGGAGTTTCATGGTGTGATTCTTGCACATTAAATGTGTGCGGAGTTCTCACTACGGCTTTCTTGATCAATAGGTTAT GCAAGTTGAACCCTTATTATCTAGGACCTGCACTTCAGGGCTTAATATTTTACAGTGGCTGAAGGCTTCTCAGCTATGTT CTCATGGTGAATTGAGTTCTGAACATTTAGAGGTAAATATTCTATTAATCAAATTGTTAATGCAAGATTTCTGATTCAAT TGGATTTCACTATTGGGAAGAAACTTAGGATGTATGATATCAATTTCAAATTGCAGCACTGTGTTCAGAAATTTAAGCTT TTGGGTCATGAAGAAACCTCATCAGTCATTAAGGAAGCTATTGCGGAACAACTGGACGGTGTGGGGCCCAGTTCGGAGAT CCTGGCACAAATTGCTGATAGCCTGGGCCTAAGGTCTAATCAGGAGGTTCTGATTGAGGCTGTGGCCCTAGAAAAGTTGA AGGAGAATGCTGAACAAACTGAAAAGACTGCAGAAGCTGAATACATTGATCAAATGATTGCTATTGTAACACGTTTGCAT GAGCGTCTTGTTATGCTCAAGCAAGACCAGAGTTGCAGCCCAGTTCCTGTACCTGCTGATTTTTGTTGTCCTCTTTCTTT GGAATTGATGACTGATCCGGTGATTGTGGCCTCAGGGCAAACTTATGAGCGGGCTTTTATCAAGAACTGGATTGCTCTTG GCCTTACTGTTTGTCCAAAGACACATCAGACCCTGGCTCACACGAACCTAATACCTAACTACACTGTAAAGGCACTAATT GCAAACTGGTGCGAGTCAAACAATGTGAAATTGGTTGATCCCACAAAGTCCACGAATTTGAATCAACCATCTATCCCTCA TGGGTATATGGAGTCTGGTACAACCAGAGAATCTCCTGTTTTACCTCATTCCAGGAACAACCAACCATCCTCACCTGAGT CAGCTCGTTCTCGTTCTTTTAGTTCACCAGGTAATAACTTGACTTCTTCTGGTGGAATCCACAGAGAGGGAACATCACCT GTGCATCCCCGTTCAACTTCAGAAGGTTCCTTAAGTGGCATGGTAAACGGTCTTGCAAGAATATCACTTGTAGGTTCAGA TGACAGGTCTGCTTGCTCAGATGAAAGCAGCATCGATTCAGTCGTTCAATCATCAATGTCACCATCTAGAATTGAATCGG CCACTGCCTTTAGCTCTGAACAATCTCAAACCCATGTTAGAGCTGTATCGGACTCCAGTGCTTTTTCTGGTGCAAATTTT CCTCAAGAAACACAAGGTGATGACAACAATGCCTCTCAGCTGTCAACGAGTCCTGGCTACAGCAGAGAAACTTCCGGTGA ATTAAGTCCAGGGCCAGATGCTTCTACTGTTGCTGCCATGCCATCAGTGCATAGAGAACCTGAATTTCCACCCCGATTGA TGGAGACAAGGTCTCGAAGCCAAGCTATTTGGAGGAGGCCATCAGAAAGACTTGGGCCTAGGATAATATCTTCTTCTGCC ATTGAAACAAGAGCTGATCTTTCTGGAATTGAAGCCCAGGTTCGGGGTTTAGTTGAGGGCTTGAGGAGCTCTGATCTTGA TACTCAGAGAGAGGCAACAGTAGAAATCCGCCTTCTTGCAAAGCACAATATGGATAATCGAATTGCAATTGCAAACTGTG GAGCCATTAGCTTATTAGTTGAGTTACTTAAATCCACTGATACAAGAATCCAGGAAAACGCTGTTACTGCACTTCTCAAC TTATCAATTAATGACAACAACAAAGCTGCTATTGCAAATGCTGGAGCAATTGAACCCCTGATTCATGTGCTTGAGACTGG GAGCCCAGAAGCCAAAGAAAATTCTGCTGCTACTCTTTTCAGCTTGTCAGTGATTGAGGAAAATAAGATTAACATTGGGA GGTCTGGGGCAATTGGACCACTAGTTGATTTATTAGGAAACGGAACCCCAAGGGGAAAGAAAGATGCTGCCACTGCTTTG TTTAATTTGTCAATATTTCATGAAAACAAGAATCGGATTGTGCAAGCTGGTGCTGTGAGGCACCTTGTGGAGCTAATGGA GCCGGCAGCTGGAATGGTTGACAAGGCAGTGGCTGTTTTAGCAAATCTTGCCACAATTCCGGAAGGAAGAAATGCAATTG GGCAGGAAGGTGGGATACCCGTTCTTGTCGAGGTTGTCGAGTTGGGTTCAGCAAGAGGAAAGGAGAATGCAGCCGCAGCT CTTCTACATCTTTGCTTACACAGTAACCGATTTTTAAGCACGGTGCTCCAACAAGGAGCTGTTCCACCATTAGTAGCCTT ATCACAGTCAGGCACCCCAAGGGCCAAAGAGAAGGTGCGGTTTTTTCTGTATGGTCCCATATTTTAGTTACATTTAATTC CATTTCTATTCTTACAAAGATGATGAATTTTGTTCTATGTTTAGGCCCAGGCTCTCCTTAATCAATTTAGAAGCCAAAGA CACGGGAATTCTGGAAGGGGCTGAGTTTGAATTCCCTGCCGCTTTTGCTATCCAAAGGTTTTGAGTTAATTAACTCTATA GAACGTCTCTAATTTATACATTACATGGTGCAAATAATGTGTGTAAAGGTATTTTATTGTTTTCACCTGATTGTAAAGTG ATAAAATACATTTATGGAGGAATGATTGTGTCCTCTTGTGAAAAACCTTTCTGTGATGTAAGAAAAGGTGTACATGTAAG TCTAGCTTTTGTTTTAACCAATTTTATTTTTTTGGTTTTGTTGCTGTGCTTGGGCATATGGTTGTGAACAAATAAAATTA TTTGTTTTATTTGTTATTTGGTCTATTTTTTTTTTTAATGAAAGCTTTGTCACCCATAAAGGTTTTAGGCTGAACGAAAT TTTGCTTCTTCAGTGGAG
CDS sequence (LotjaGi6g1v0104900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGATATCATTGTTAAAAGTGCTTGTTAATAGCATATCCTCATTTTTGCATTTATCATTTTCTGGTAATATAAACTT AGAACCAGTCTCTAAGTATTACCAGAAGGCAGAGGATATACTTAAGTTGTTGAAGCCGATCATTGATGCGATTGTTAATT CTGAGTTCGCTTCTGATGAAGTGCTAAGCAAGATGTTTGAAGAACTTGCTCACACTGTTGATGAATTAAAGGAGTATGTT GATAATTGGCACCTATTGTCTAGCAAAGTTTATTTTGTTATGCAAGTTGAACCCTTATTATCTAGGACCTGCACTTCAGG GCTTAATATTTTACAGTGGCTGAAGGCTTCTCAGCTATGTTCTCATGGTGAATTGAGTTCTGAACATTTAGAGCACTGTG TTCAGAAATTTAAGCTTTTGGGTCATGAAGAAACCTCATCAGTCATTAAGGAAGCTATTGCGGAACAACTGGACGGTGTG GGGCCCAGTTCGGAGATCCTGGCACAAATTGCTGATAGCCTGGGCCTAAGGTCTAATCAGGAGGTTCTGATTGAGGCTGT GGCCCTAGAAAAGTTGAAGGAGAATGCTGAACAAACTGAAAAGACTGCAGAAGCTGAATACATTGATCAAATGATTGCTA TTGTAACACGTTTGCATGAGCGTCTTGTTATGCTCAAGCAAGACCAGAGTTGCAGCCCAGTTCCTGTACCTGCTGATTTT TGTTGTCCTCTTTCTTTGGAATTGATGACTGATCCGGTGATTGTGGCCTCAGGGCAAACTTATGAGCGGGCTTTTATCAA GAACTGGATTGCTCTTGGCCTTACTGTTTGTCCAAAGACACATCAGACCCTGGCTCACACGAACCTAATACCTAACTACA CTGTAAAGGCACTAATTGCAAACTGGTGCGAGTCAAACAATGTGAAATTGGTTGATCCCACAAAGTCCACGAATTTGAAT CAACCATCTATCCCTCATGGGTATATGGAGTCTGGTACAACCAGAGAATCTCCTGTTTTACCTCATTCCAGGAACAACCA ACCATCCTCACCTGAGTCAGCTCGTTCTCGTTCTTTTAGTTCACCAGGTAATAACTTGACTTCTTCTGGTGGAATCCACA GAGAGGGAACATCACCTGTGCATCCCCGTTCAACTTCAGAAGGTTCCTTAAGTGGCATGGTAAACGGTCTTGCAAGAATA TCACTTGTAGGTTCAGATGACAGGTCTGCTTGCTCAGATGAAAGCAGCATCGATTCAGTCGTTCAATCATCAATGTCACC ATCTAGAATTGAATCGGCCACTGCCTTTAGCTCTGAACAATCTCAAACCCATGTTAGAGCTGTATCGGACTCCAGTGCTT TTTCTGGTGCAAATTTTCCTCAAGAAACACAAGGTGATGACAACAATGCCTCTCAGCTGTCAACGAGTCCTGGCTACAGC AGAGAAACTTCCGGTGAATTAAGTCCAGGGCCAGATGCTTCTACTGTTGCTGCCATGCCATCAGTGCATAGAGAACCTGA ATTTCCACCCCGATTGATGGAGACAAGGTCTCGAAGCCAAGCTATTTGGAGGAGGCCATCAGAAAGACTTGGGCCTAGGA TAATATCTTCTTCTGCCATTGAAACAAGAGCTGATCTTTCTGGAATTGAAGCCCAGGTTCGGGGTTTAGTTGAGGGCTTG AGGAGCTCTGATCTTGATACTCAGAGAGAGGCAACAGTAGAAATCCGCCTTCTTGCAAAGCACAATATGGATAATCGAAT TGCAATTGCAAACTGTGGAGCCATTAGCTTATTAGTTGAGTTACTTAAATCCACTGATACAAGAATCCAGGAAAACGCTG TTACTGCACTTCTCAACTTATCAATTAATGACAACAACAAAGCTGCTATTGCAAATGCTGGAGCAATTGAACCCCTGATT CATGTGCTTGAGACTGGGAGCCCAGAAGCCAAAGAAAATTCTGCTGCTACTCTTTTCAGCTTGTCAGTGATTGAGGAAAA TAAGATTAACATTGGGAGGTCTGGGGCAATTGGACCACTAGTTGATTTATTAGGAAACGGAACCCCAAGGGGAAAGAAAG ATGCTGCCACTGCTTTGTTTAATTTGTCAATATTTCATGAAAACAAGAATCGGATTGTGCAAGCTGGTGCTGTGAGGCAC CTTGTGGAGCTAATGGAGCCGGCAGCTGGAATGGTTGACAAGGCAGTGGCTGTTTTAGCAAATCTTGCCACAATTCCGGA AGGAAGAAATGCAATTGGGCAGGAAGGTGGGATACCCGTTCTTGTCGAGGTTGTCGAGTTGGGTTCAGCAAGAGGAAAGG AGAATGCAGCCGCAGCTCTTCTACATCTTTGCTTACACAGTAACCGATTTTTAAGCACGGTGCTCCAACAAGGAGCTGTT CCACCATTAGTAGCCTTATCACAGTCAGGCACCCCAAGGGCCAAAGAGAAGGCCCAGGCTCTCCTTAATCAATTTAGAAG CCAAAGACACGGGAATTCTGGAAGGGGCTGA
Protein sequence (LotjaGi6g1v0104900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGISLLKVLVNSISSFLHLSFSGNINLEPVSKYYQKAEDILKLLKPIIDAIVNSEFASDEVLSKMFEELAHTVDELKEYV DNWHLLSSKVYFVMQVEPLLSRTCTSGLNILQWLKASQLCSHGELSSEHLEHCVQKFKLLGHEETSSVIKEAIAEQLDGV GPSSEILAQIADSLGLRSNQEVLIEAVALEKLKENAEQTEKTAEAEYIDQMIAIVTRLHERLVMLKQDQSCSPVPVPADF CCPLSLELMTDPVIVASGQTYERAFIKNWIALGLTVCPKTHQTLAHTNLIPNYTVKALIANWCESNNVKLVDPTKSTNLN QPSIPHGYMESGTTRESPVLPHSRNNQPSSPESARSRSFSSPGNNLTSSGGIHREGTSPVHPRSTSEGSLSGMVNGLARI SLVGSDDRSACSDESSIDSVVQSSMSPSRIESATAFSSEQSQTHVRAVSDSSAFSGANFPQETQGDDNNASQLSTSPGYS RETSGELSPGPDASTVAAMPSVHREPEFPPRLMETRSRSQAIWRRPSERLGPRIISSSAIETRADLSGIEAQVRGLVEGL RSSDLDTQREATVEIRLLAKHNMDNRIAIANCGAISLLVELLKSTDTRIQENAVTALLNLSINDNNKAAIANAGAIEPLI HVLETGSPEAKENSAATLFSLSVIEENKINIGRSGAIGPLVDLLGNGTPRGKKDAATALFNLSIFHENKNRIVQAGAVRH LVELMEPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPVLVEVVELGSARGKENAAAALLHLCLHSNRFLSTVLQQGAV PPLVALSQSGTPRAKEKAQALLNQFRSQRHGNSGRG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 834 | 828 | 0.0 | – | |
| PANTHER | 7 | 834 | 828 | 0.0 | – | |
| Coils | 179 | 209 | 31 | - | – | |
| Gene3D | 221 | 315 | 95 | 2.3E-25 | ||
| SUPERFAMILY | 225 | 313 | 89 | 9.08E-28 | – | |
| ProSiteProfiles | 235 | 309 | 75 | 40.241 | ||
| Pfam | 236 | 306 | 71 | 1.1E-20 | ||
| SMART | 239 | 302 | 64 | 8.6E-31 | ||
| CDD | 240 | 282 | 43 | 1.04108E-22 | – | |
| MobiDBLite | 312 | 392 | 81 | - | – | |
| MobiDBLite | 405 | 519 | 115 | - | – | |
| MobiDBLite | 408 | 490 | 83 | - | – | |
| SMART | 536 | 580 | 45 | 280.0 | ||
| Gene3D | 551 | 731 | 181 | 1.2E-44 | ||
| SUPERFAMILY | 553 | 825 | 273 | 1.48E-48 | ||
| SMART | 582 | 622 | 41 | 7.2E-8 | ||
| Pfam | 584 | 621 | 38 | 7.6E-11 | ||
| ProSiteProfiles | 593 | 635 | 43 | 14.857 | ||
| SMART | 623 | 663 | 41 | 0.0025 | ||
| Pfam | 623 | 662 | 40 | 5.8E-6 | ||
| SMART | 664 | 704 | 41 | 0.25 | ||
| Pfam | 666 | 703 | 38 | 4.0E-6 | ||
| ProSiteProfiles | 675 | 717 | 43 | 10.272 | ||
| SMART | 705 | 744 | 40 | 0.0046 | ||
| ProSiteProfiles | 716 | 757 | 42 | 10.657 | ||
| Gene3D | 733 | 833 | 101 | 2.5E-13 | ||
| SMART | 745 | 785 | 41 | 6.7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of LotjaGi6g1v0104900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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