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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0139700 |
| Transcript ID | LotjaGi6g1v0139700.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock protein 90; TAIR: AT5G56000.1 HEAT SHOCK PROTEIN 81.4; Swiss-Prot: sp|P36181|HSP80_SOLLC Heat shock cognate protein 80; TrEMBL-Plants: tr|T2AUM9|T2AUM9_POPTO HSP90; Found in the gene: LotjaGi6g1v0139700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:40657671..40661417) extracted from Lotus japonicus Gifu genome v1.2.
TGAATTTTCCCCTTAACTAACACAAACAAGTCAAGTCATGATAGAAGAGTCTAGAATGAACTCAACTCTCTCCCTCCCAT ATTATAGCCTCAAATAATTTATTTTAGCAATGAATCCGTCATAGAAGGATCTAGAAACCCTACTCACCTCCCACCTATAT AAACCACTCTCCTCTTCAACCCTCTTCATTCTCTCACGCAAAACCCTAACCACCTCTTCTTCTTCCTCGCTCGCTGACTC GTTCGTTCTTCCGATCGGAGAACATGGCGGATACCGAGACGTTCGCGTTTCAGGCGGAGATCAACCAGCTTCTCAGCCTC ATCATCAACACGTTCTACTCTAACAAGGAGATCTTCCTTCGTGAACTCATCAGTAACGCCTCTGATGTGAGTTTTCGTTC TCCGAATTTCCTAGTTTTTTTGATTCTAACATGCTCGTTTTTCTCGATCTGGATTTCGTTTCTGTTTTTTGTTCAATTTG GCTCATGTTCATGCGATCTACGATGAGTGTGAATTGAATTGTTTAAATCTGTTGTTTTCTGATGTGTTGATCTCATCCGC TATTGGATTTTGCTCAGGAATCTAGGTTTTCAAAAGATTTTAGCCTATTTTGTATATCTGAATGCTGTTGAATACTTTGC TTTGGTTTCGGAGTGTGATTCATGAATTTTGTTTGTTTTTGTTGCTGTATCTTCATATCTATAATAGTTATAGCATTTTC CTTGATTGTAGTTGATTGATTGAGTCGAATTAATTGGAAATTGTGGCTGTATTAGAAATTTTGTTTCAGTTGATGAATTT GTTCTGTTGGATGGTATTTGATTGTGATTGTGGCTATGTAATGTTGCAGGCTTTGGACAAGATCCGTTTCGAGAGTCTCA CAGACAAGAGCAAGCTCGATGGACAACCCGAATTGTTCATCCATATCATTCCTGACAAGGCAAACAACACTTTGACCATT ATTGACAGTGGTATCGGCATGACCAAGGCTGGTAAGGACTCAAAATGAGTTTCCATTGAATCGTTTTTTCTTGTTTAGTT GCAATGTATGGTTGTTAATTGGTTCTAATCTGCGTTTTTGTTTATGTTATTCCAGATTTGGTGAACAACTTGGGTACAAT TGCAAGGTCTGGCACCAAGGAATTCATGGAAGCCTTGGCTGCTGGTGCTGATGTTAGCATGATTGGACAGTTTGGTGTTG GTTTCTACTCGGCCTATCTGGTTGCTGAGAAGGTTATTGTTACCACCAAGCATAACGATGACGAGCAGTACATTTGGGAG TCTCAAGCTGGTGGGTCTTTCACTGTTACCAGGGATTCTGGCGAGCCTCTTGGCAGGGGGACTAAGATCACCCTCCATTT GAAGGAGGACCAGCTTGAGTACCTTGAGGAGCGCCGGTTGAAGGACTTGATTAAGAAGCATTCTGAGTTCATCAGCTACC CAATTTCTCTGTGGATTGAGAAGACCACTGAGAAGGAGATCTCTGATGATGAGGACGAGGAAGAGAAGAAGGATGAAGAG GGTAAAGTGGAGGATGTTGACGAAGAGAAGGAGAAGGAAGAAAAGAAGAAGAAGAAGATTAAGGAGGTGTCTCATGAATG GTCTTTGGTGAACAAGCAGAAGCCTATCTGGATGAGGAAGCCAGAAGAGATTAACAAGGAGGAATATGCTGCTTTCTACA AGAGTCTCACCAATGACTGGGAAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAGGGTCAGCTTGAGTTCAAGGCTGTT CTCTTTGTACCCAAGAGGGCACCATTTGACCTCTTTGACACAAGGAAGAAGCCTAACAACATCAAGCTCTATGTGCGACG TGTCTTTATCATGGACAACTGTGAGGAGTTGATGCCTGAGTACCTGAGCTTTGTCAAGGGTATTGTTGATTCTGAGGATC TCCCACTGAACATCTCCAGAGAAATGTTGCAGCAGAACAAGATTTTGAAGGTTATCCGTAAGAATTTGGTTAAGAAGTGT GTGGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGATTACAACAAGTTTTATGAAGCTTTCTCTAAGAATTTGAAATT GGGTATTCATGAGGATTCACAGAACAAGAACAAGCTTGCTGAGCTTCTCAGGTATCACTCCACAAAGAGTGGTGATGAGA TGACCAGCCTCAAGGACTACGTGACCAGGATGAAGGAAGGTCAGAATGATATTTACTACATTACTGGTGAAAGCAAGAAA GCTGTTGAGAACTCTCCATTCTTAGAGAAGTTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCTATTGATGA ATATGCTATTGGTCAACTTAAGGAATTTGAGGGCAAGAAGCTGGTGTCTGCTACCAAGGAAGGTTTGAAACTTGAAGAAA GTGAAGACGAGAAGAAGAAGCAAGAGGAACTGAAGGAGAAGTTTGATGGTCTCTGCAAGGTGATGAAGGATGTGTTGGGC GACAAGGTGGAGAAGGTTGTGGTTTCTGACCGTGTGGTCGACTCACCTTGCTGTCTTGTGACCGGCGAGTATGGATGGAC CGCCAACATGGAAAGGATCATGAAAGCTCAAGCTTTGAGGGACAGCAGCATGGCTGGGTACATGTCAAGCAAGAAGACAA TGGAGATCAACCCTGAGAACCCCATCATGGAGGAGCTCAGGAAGCGAGCTGATGCTGACCACAACGACAAATCTGTGAAG GATCTTGTCCTCTTGCTCTTTGAGACTGCCCTTCTCACATCTGGCTTCAGCCTTGACGATCCCAACACTTTTGGCAACAG AATCCACAGAATGTTGAAGCTTGGATTGAGCATTGACGAGGATGCAGGTGAAGCTGATGCTGACATGCCCCCACTTGAGG AAGCAGATGTTGATGCTGAGGGTTCCAAGATGGAAGAAGTTGATTAAATTTGATTGACTGCGTTTGATTAATTAGCAAGT ATTTTCGAGCTCATCTTTTGGCTCTGTTTTTGCTTTTTCATTTTTTTTGTTTTTAGTTTTGGTTTGTTGACAATATTAAT GCGCAAGTTACCTATAATTTCCGGGATTTAGTTTATTTTATGTCTCTAATTCTGTTTGTTAATTTTGGTTTATTTCTTGG TTAATGAGTTGTTTCTAAGTTCACGTTGGCACTATTGAGCCCTCTCCACATTTTAATACTATATTGGTCACGGGGAAAAA AGGCAAAAGATGTTCAATTTTTGCTGTTAGAAAAGGATACAAATTGTATTGTTGTTGTTAATCCTAACAAATTGTGATGG TATGATTAGTTTAGTTCTGTTTTGATTTGTGTCTAGAATGGGTTATGGCTTCAATTTTGGAAAACTTTTTTCAAAGTAAA AGATACGTAAAATTTTAATGAAATGACTGTTACAAAAAGACAACTTAACAGATATGAATTTTCAATATGTAGAGTATGTT TTACACTCAGAGAGAGAAGCTTAATCACCTGAAGTGATGAAGCAACTGGACTTGGTGTGTTTAATTAAAAGTCGAAAAAA GTAAAGAATTTTCCCTCAGTTATCTTTTTTATTCAATTGGCTTAGTAGAATTTTTTTTGAACGTGGCTTAGTGGAATTGA AAAGAAGGAAATGTGCGTTTTAAGTTTTCCAAACATGCTGTTAATAGAAGCTCCACCGGATGACATCTTCTAGTCTAAGA AAAAAGGCTTCTATAAAGTAAATAAAGTAGCATTACCTACAAACTGGGTCGGAGATTCAATAATATT
CDS sequence (LotjaGi6g1v0139700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGATACCGAGACGTTCGCGTTTCAGGCGGAGATCAACCAGCTTCTCAGCCTCATCATCAACACGTTCTACTCTAA CAAGGAGATCTTCCTTCGTGAACTCATCAGTAACGCCTCTGATGCTTTGGACAAGATCCGTTTCGAGAGTCTCACAGACA AGAGCAAGCTCGATGGACAACCCGAATTGTTCATCCATATCATTCCTGACAAGGCAAACAACACTTTGACCATTATTGAC AGTGGTATCGGCATGACCAAGGCTGATTTGGTGAACAACTTGGGTACAATTGCAAGGTCTGGCACCAAGGAATTCATGGA AGCCTTGGCTGCTGGTGCTGATGTTAGCATGATTGGACAGTTTGGTGTTGGTTTCTACTCGGCCTATCTGGTTGCTGAGA AGGTTATTGTTACCACCAAGCATAACGATGACGAGCAGTACATTTGGGAGTCTCAAGCTGGTGGGTCTTTCACTGTTACC AGGGATTCTGGCGAGCCTCTTGGCAGGGGGACTAAGATCACCCTCCATTTGAAGGAGGACCAGCTTGAGTACCTTGAGGA GCGCCGGTTGAAGGACTTGATTAAGAAGCATTCTGAGTTCATCAGCTACCCAATTTCTCTGTGGATTGAGAAGACCACTG AGAAGGAGATCTCTGATGATGAGGACGAGGAAGAGAAGAAGGATGAAGAGGGTAAAGTGGAGGATGTTGACGAAGAGAAG GAGAAGGAAGAAAAGAAGAAGAAGAAGATTAAGGAGGTGTCTCATGAATGGTCTTTGGTGAACAAGCAGAAGCCTATCTG GATGAGGAAGCCAGAAGAGATTAACAAGGAGGAATATGCTGCTTTCTACAAGAGTCTCACCAATGACTGGGAAGAGCATT TGGCTGTCAAGCACTTCTCTGTTGAGGGTCAGCTTGAGTTCAAGGCTGTTCTCTTTGTACCCAAGAGGGCACCATTTGAC CTCTTTGACACAAGGAAGAAGCCTAACAACATCAAGCTCTATGTGCGACGTGTCTTTATCATGGACAACTGTGAGGAGTT GATGCCTGAGTACCTGAGCTTTGTCAAGGGTATTGTTGATTCTGAGGATCTCCCACTGAACATCTCCAGAGAAATGTTGC AGCAGAACAAGATTTTGAAGGTTATCCGTAAGAATTTGGTTAAGAAGTGTGTGGAGCTTTTCTTTGAAATTGCTGAGAAC AAGGAGGATTACAACAAGTTTTATGAAGCTTTCTCTAAGAATTTGAAATTGGGTATTCATGAGGATTCACAGAACAAGAA CAAGCTTGCTGAGCTTCTCAGGTATCACTCCACAAAGAGTGGTGATGAGATGACCAGCCTCAAGGACTACGTGACCAGGA TGAAGGAAGGTCAGAATGATATTTACTACATTACTGGTGAAAGCAAGAAAGCTGTTGAGAACTCTCCATTCTTAGAGAAG TTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCTATTGATGAATATGCTATTGGTCAACTTAAGGAATTTGA GGGCAAGAAGCTGGTGTCTGCTACCAAGGAAGGTTTGAAACTTGAAGAAAGTGAAGACGAGAAGAAGAAGCAAGAGGAAC TGAAGGAGAAGTTTGATGGTCTCTGCAAGGTGATGAAGGATGTGTTGGGCGACAAGGTGGAGAAGGTTGTGGTTTCTGAC CGTGTGGTCGACTCACCTTGCTGTCTTGTGACCGGCGAGTATGGATGGACCGCCAACATGGAAAGGATCATGAAAGCTCA AGCTTTGAGGGACAGCAGCATGGCTGGGTACATGTCAAGCAAGAAGACAATGGAGATCAACCCTGAGAACCCCATCATGG AGGAGCTCAGGAAGCGAGCTGATGCTGACCACAACGACAAATCTGTGAAGGATCTTGTCCTCTTGCTCTTTGAGACTGCC CTTCTCACATCTGGCTTCAGCCTTGACGATCCCAACACTTTTGGCAACAGAATCCACAGAATGTTGAAGCTTGGATTGAG CATTGACGAGGATGCAGGTGAAGCTGATGCTGACATGCCCCCACTTGAGGAAGCAGATGTTGATGCTGAGGGTTCCAAGA TGGAAGAAGTTGATTAA
Protein sequence (LotjaGi6g1v0139700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIID SGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVT RDSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISDDEDEEEKKDEEGKVEDVDEEK EKEEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEINKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFD LFDTRKKPNNIKLYVRRVFIMDNCEELMPEYLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAEN KEDYNKFYEAFSKNLKLGIHEDSQNKNKLAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEK LKKKGYEVLYMVDAIDEYAIGQLKEFEGKKLVSATKEGLKLEESEDEKKKQEELKEKFDGLCKVMKDVLGDKVEKVVVSD RVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENPIMEELRKRADADHNDKSVKDLVLLLFETA LLTSGFSLDDPNTFGNRIHRMLKLGLSIDEDAGEADADMPPLEEADVDAEGSKMEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 242 | 242 | 0.0 | ||
| PANTHER | 1 | 242 | 242 | 0.0 | – | |
| PIRSF | 1 | 698 | 698 | 7.5E-259 | ||
| Hamap | 2 | 663 | 662 | 27.401 | ||
| Gene3D | 5 | 209 | 205 | 7.9E-107 | ||
| PRINTS | 5 | 25 | 21 | 8.7E-85 | ||
| SUPERFAMILY | 5 | 212 | 208 | 5.63E-75 | ||
| CDD | 14 | 201 | 188 | 6.20666E-115 | – | |
| ProSitePatterns | 25 | 34 | 10 | - | ||
| PRINTS | 26 | 48 | 23 | 8.7E-85 | ||
| SMART | 27 | 181 | 155 | 2.1E-10 | ||
| Pfam | 27 | 180 | 154 | 2.9E-16 | ||
| PRINTS | 75 | 92 | 18 | 8.7E-85 | ||
| PRINTS | 93 | 110 | 18 | 8.7E-85 | ||
| PRINTS | 118 | 140 | 23 | 8.7E-85 | ||
| PRINTS | 169 | 186 | 18 | 8.7E-85 | ||
| Pfam | 183 | 685 | 503 | 7.9E-235 | ||
| PRINTS | 187 | 205 | 19 | 8.7E-85 | ||
| Gene3D | 210 | 251 | 42 | 7.9E-107 | – | |
| MobiDBLite | 214 | 247 | 34 | - | – | |
| MobiDBLite | 216 | 237 | 22 | - | – | |
| Coils | 226 | 256 | 31 | - | – | |
| PANTHER | 244 | 698 | 455 | 0.0 | ||
| PANTHER | 244 | 698 | 455 | 0.0 | – | |
| Gene3D | 261 | 434 | 174 | 9.0E-81 | – | |
| SUPERFAMILY | 262 | 517 | 256 | 2.05E-108 | ||
| Gene3D | 435 | 517 | 83 | 1.6E-38 | – | |
| Gene3D | 518 | 666 | 149 | 7.8E-68 | ||
| Coils | 521 | 541 | 21 | - | – | |
| SUPERFAMILY | 541 | 662 | 122 | 2.22E-39 | ||
| MobiDBLite | 672 | 698 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi6g1v0139700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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