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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0139700 |
| Transcript ID | LotjaGi6g1v0139700.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock protein 90; TAIR: AT5G56000.1 HEAT SHOCK PROTEIN 81.4; Swiss-Prot: sp|P36181|HSP80_SOLLC Heat shock cognate protein 80; TrEMBL-Plants: tr|D6C500|D6C500_SOYBN HSP90-2; Found in the gene: LotjaGi6g1v0139700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:40657919..40660597) extracted from Lotus japonicus Gifu genome v1.2.
TTCCGATCGGAGAACATGGCGGATACCGAGACGTTCGCGTTTCAGGCGGAGATCAACCAGCTTCTCAGCCTCATCATCAA CACGTTCTACTCTAACAAGGAGATCTTCCTTCGTGAACTCATCAGTAACGCCTCTGATGTGAGTTTTCGTTCTCCGAATT TCCTAGTTTTTTTGATTCTAACATGCTCGTTTTTCTCGATCTGGATTTCGTTTCTGTTTTTTGTTCAATTTGGCTCATGT TCATGCGATCTACGATGAGTGTGAATTGAATTGTTTAAATCTGTTGTTTTCTGATGTGTTGATCTCATCCGCTATTGGAT TTTGCTCAGGAATCTAGGTTTTCAAAAGATTTTAGCCTATTTTGTATATCTGAATGCTGTTGAATACTTTGCTTTGGTTT CGGAGTGTGATTCATGAATTTTGTTTGTTTTTGTTGCTGTATCTTCATATCTATAATAGTTATAGCATTTTCCTTGATTG TAGTTGATTGATTGAGTCGAATTAATTGGAAATTGTGGCTGTATTAGAAATTTTGTTTCAGTTGATGAATTTGTTCTGTT GGATGGTATTTGATTGTGATTGTGGCTATGTAATGTTGCAGGCTTTGGACAAGATCCGTTTCGAGAGTCTCACAGACAAG AGCAAGCTCGATGGACAACCCGAATTGTTCATCCATATCATTCCTGACAAGGCAAACAACACTTTGACCATTATTGACAG TGGTATCGGCATGACCAAGGCTGGTAAGGACTCAAAATGAGTTTCCATTGAATCGTTTTTTCTTGTTTAGTTGCAATGTA TGGTTGTTAATTGGTTCTAATCTGCGTTTTTGTTTATGTTATTCCAGATTTGGTGAACAACTTGGGTACAATTGCAAGGT CTGGCACCAAGGAATTCATGGAAGCCTTGGCTGCTGGTGCTGATGTTAGCATGATTGGACAGTTTGGTGTTGGTTTCTAC TCGGCCTATCTGGTTGCTGAGAAGGTTATTGTTACCACCAAGCATAACGATGACGAGCAGTACATTTGGGAGTCTCAAGC TGGTGGGTCTTTCACTGTTACCAGGGATTCTGGCGAGCCTCTTGGCAGGGGGACTAAGATCACCCTCCATTTGAAGGAGG ACCAGCTTGAGTACCTTGAGGAGCGCCGGTTGAAGGACTTGATTAAGAAGCATTCTGAGTTCATCAGCTACCCAATTTCT CTGTGGATTGAGAAGACCACTGAGAAGGAGATCTCTGATGATGAGGACGAGGAAGAGAAGAAGGATGAAGAGGGTAAAGT GGAGGATGTTGACGAAGAGAAGGAGAAGGAAGAAAAGAAGAAGAAGAAGATTAAGGAGGTGTCTCATGAATGGTCTTTGG TGAACAAGCAGAAGCCTATCTGGATGAGGAAGCCAGAAGAGATTAACAAGGAGGAATATGCTGCTTTCTACAAGAGTCTC ACCAATGACTGGGAAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAGGGTCAGCTTGAGTTCAAGGCTGTTCTCTTTGT ACCCAAGAGGGCACCATTTGACCTCTTTGACACAAGGAAGAAGCCTAACAACATCAAGCTCTATGTGCGACGTGTCTTTA TCATGGACAACTGTGAGGAGTTGATGCCTGAGTACCTGAGCTTTGTCAAGGGTATTGTTGATTCTGAGGATCTCCCACTG AACATCTCCAGAGAAATGTTGCAGCAGAACAAGATTTTGAAGGTTATCCGTAAGAATTTGGTTAAGAAGTGTGTGGAGCT TTTCTTTGAAATTGCTGAGAACAAGGAGGATTACAACAAGTTTTATGAAGCTTTCTCTAAGAATTTGAAATTGGGTATTC ATGAGGATTCACAGAACAAGAACAAGCTTGCTGAGCTTCTCAGGTATCACTCCACAAAGAGTGGTGATGAGATGACCAGC CTCAAGGACTACGTGACCAGGATGAAGGAAGGTCAGAATGATATTTACTACATTACTGGTGAAAGCAAGAAAGCTGTTGA GAACTCTCCATTCTTAGAGAAGTTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCTATTGATGAATATGCTA TTGGTCAACTTAAGGAATTTGAGGGCAAGAAGCTGGTGTCTGCTACCAAGGAAGGTTTGAAACTTGAAGAAAGTGAAGAC GAGAAGAAGAAGCAAGAGGAACTGAAGGAGAAGTTTGATGGTCTCTGCAAGGTGATGAAGGATGTGTTGGGCGACAAGGT GGAGAAGGTTGTGGTTTCTGACCGTGTGGTCGACTCACCTTGCTGTCTTGTGACCGGCGAGTATGGATGGACCGCCAACA TGGAAAGGATCATGAAAGCTCAAGCTTTGAGGGACAGCAGCATGGCTGGGTACATGTCAAGCAAGAAGACAATGGAGATC AACCCTGAGAACCCCATCATGGAGGAGCTCAGGAAGCGAGCTGATGCTGACCACAACGACAAATCTGTGAAGGATCTTGT CCTCTTGCTCTTTGAGACTGCCCTTCTCACATCTGGCTTCAGCCTTGACGATCCCAACACTTTTGGCAACAGAATCCACA GAATGTTGAAGCTTGGATTGAGCATTGACGAGGATGCAGGTGAAGCTGATGCTGACATGCCCCCACTTGAGGAAGCAGAT GTTGATGCTGAGGGTTCCAAGATGGAAGAAGTTGATTAA
CDS sequence (LotjaGi6g1v0139700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGATACCGAGACGTTCGCGTTTCAGGCGGAGATCAACCAGCTTCTCAGCCTCATCATCAACACGTTCTACTCTAA CAAGGAGATCTTCCTTCGTGAACTCATCAGTAACGCCTCTGATGCTTTGGACAAGATCCGTTTCGAGAGTCTCACAGACA AGAGCAAGCTCGATGGACAACCCGAATTGTTCATCCATATCATTCCTGACAAGGCAAACAACACTTTGACCATTATTGAC AGTGGTATCGGCATGACCAAGGCTGATTTGGTGAACAACTTGGGTACAATTGCAAGGTCTGGCACCAAGGAATTCATGGA AGCCTTGGCTGCTGGTGCTGATGTTAGCATGATTGGACAGTTTGGTGTTGGTTTCTACTCGGCCTATCTGGTTGCTGAGA AGGTTATTGTTACCACCAAGCATAACGATGACGAGCAGTACATTTGGGAGTCTCAAGCTGGTGGGTCTTTCACTGTTACC AGGGATTCTGGCGAGCCTCTTGGCAGGGGGACTAAGATCACCCTCCATTTGAAGGAGGACCAGCTTGAGTACCTTGAGGA GCGCCGGTTGAAGGACTTGATTAAGAAGCATTCTGAGTTCATCAGCTACCCAATTTCTCTGTGGATTGAGAAGACCACTG AGAAGGAGATCTCTGATGATGAGGACGAGGAAGAGAAGAAGGATGAAGAGGGTAAAGTGGAGGATGTTGACGAAGAGAAG GAGAAGGAAGAAAAGAAGAAGAAGAAGATTAAGGAGGTGTCTCATGAATGGTCTTTGGTGAACAAGCAGAAGCCTATCTG GATGAGGAAGCCAGAAGAGATTAACAAGGAGGAATATGCTGCTTTCTACAAGAGTCTCACCAATGACTGGGAAGAGCATT TGGCTGTCAAGCACTTCTCTGTTGAGGGTCAGCTTGAGTTCAAGGCTGTTCTCTTTGTACCCAAGAGGGCACCATTTGAC CTCTTTGACACAAGGAAGAAGCCTAACAACATCAAGCTCTATGTGCGACGTGTCTTTATCATGGACAACTGTGAGGAGTT GATGCCTGAGTACCTGAGCTTTGTCAAGGGTATTGTTGATTCTGAGGATCTCCCACTGAACATCTCCAGAGAAATGTTGC AGCAGAACAAGATTTTGAAGGTTATCCGTAAGAATTTGGTTAAGAAGTGTGTGGAGCTTTTCTTTGAAATTGCTGAGAAC AAGGAGGATTACAACAAGTTTTATGAAGCTTTCTCTAAGAATTTGAAATTGGGTATTCATGAGGATTCACAGAACAAGAA CAAGCTTGCTGAGCTTCTCAGGTATCACTCCACAAAGAGTGGTGATGAGATGACCAGCCTCAAGGACTACGTGACCAGGA TGAAGGAAGGTCAGAATGATATTTACTACATTACTGGTGAAAGCAAGAAAGCTGTTGAGAACTCTCCATTCTTAGAGAAA TATGCTATTGGTCAACTTAAGGAATTTGAGGGCAAGAAGCTGGTGTCTGCTACCAAGGAAGGTTTGAAACTTGAAGAAAG TGAAGACGAGAAGAAGAAGCAAGAGGAACTGAAGGAGAAGTTTGATGGTCTCTGCAAGGTGATGAAGGATGTGTTGGGCG ACAAGGTGGAGAAGGTTGTGGTTTCTGACCGTGTGGTCGACTCACCTTGCTGTCTTGTGACCGGCGAGTATGGATGGACC GCCAACATGGAAAGGATCATGAAAGCTCAAGCTTTGAGGGACAGCAGCATGGCTGGGTACATGTCAAGCAAGAAGACAAT GGAGATCAACCCTGAGAACCCCATCATGGAGGAGCTCAGGAAGCGAGCTGATGCTGACCACAACGACAAATCTGTGAAGG ATCTTGTCCTCTTGCTCTTTGAGACTGCCCTTCTCACATCTGGCTTCAGCCTTGACGATCCCAACACTTTTGGCAACAGA ATCCACAGAATGTTGAAGCTTGGATTGAGCATTGACGAGGATGCAGGTGAAGCTGATGCTGACATGCCCCCACTTGAGGA AGCAGATGTTGATGCTGAGGGTTCCAAGATGGAAGAAGTTGATTAA
Protein sequence (LotjaGi6g1v0139700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIID SGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVT RDSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISDDEDEEEKKDEEGKVEDVDEEK EKEEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEINKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFD LFDTRKKPNNIKLYVRRVFIMDNCEELMPEYLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAEN KEDYNKFYEAFSKNLKLGIHEDSQNKNKLAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEK YAIGQLKEFEGKKLVSATKEGLKLEESEDEKKKQEELKEKFDGLCKVMKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWT ANMERIMKAQALRDSSMAGYMSSKKTMEINPENPIMEELRKRADADHNDKSVKDLVLLLFETALLTSGFSLDDPNTFGNR IHRMLKLGLSIDEDAGEADADMPPLEEADVDAEGSKMEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 242 | 242 | 0.0 | – | |
| PANTHER | 1 | 242 | 242 | 0.0 | ||
| PIRSF | 1 | 681 | 681 | 1.5E-240 | ||
| Hamap | 2 | 646 | 645 | 25.707 | ||
| Gene3D | 5 | 209 | 205 | 7.5E-107 | ||
| SUPERFAMILY | 5 | 212 | 208 | 5.37E-75 | ||
| PRINTS | 5 | 25 | 21 | 7.1E-85 | ||
| CDD | 14 | 201 | 188 | 2.28538E-115 | – | |
| ProSitePatterns | 25 | 34 | 10 | - | ||
| PRINTS | 26 | 48 | 23 | 7.1E-85 | ||
| Pfam | 27 | 180 | 154 | 2.8E-16 | ||
| SMART | 27 | 181 | 155 | 2.1E-10 | ||
| PRINTS | 75 | 92 | 18 | 7.1E-85 | ||
| PRINTS | 93 | 110 | 18 | 7.1E-85 | ||
| PRINTS | 118 | 140 | 23 | 7.1E-85 | ||
| PRINTS | 169 | 186 | 18 | 7.1E-85 | ||
| Pfam | 183 | 668 | 486 | 4.8E-214 | ||
| PRINTS | 187 | 205 | 19 | 7.1E-85 | ||
| Gene3D | 210 | 251 | 42 | 7.5E-107 | – | |
| MobiDBLite | 214 | 247 | 34 | - | – | |
| MobiDBLite | 216 | 237 | 22 | - | – | |
| Coils | 226 | 256 | 31 | - | – | |
| PANTHER | 244 | 681 | 438 | 0.0 | ||
| PANTHER | 244 | 681 | 438 | 0.0 | – | |
| Gene3D | 261 | 429 | 169 | 8.6E-81 | – | |
| SUPERFAMILY | 262 | 500 | 239 | 1.52E-97 | ||
| Gene3D | 430 | 499 | 70 | 9.6E-21 | – | |
| Gene3D | 500 | 649 | 150 | 7.5E-68 | ||
| Coils | 504 | 524 | 21 | - | – | |
| SUPERFAMILY | 524 | 645 | 122 | 2.09E-39 | ||
| MobiDBLite | 655 | 681 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi6g1v0139700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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