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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0148200 |
| Transcript ID | LotjaGi6g1v0148200.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter C family protein; TAIR: AT3G13080.1 multidrug resistance-associated protein 3; Swiss-Prot: sp|Q9LK64|AB3C_ARATH ABC transporter C family member 3; TrEMBL-Plants: tr|A0A151R8L4|A0A151R8L4_CAJCA ABC transporter C family member 3; Found in the gene: LotjaGi6g1v0148200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:42338247..42344219) extracted from Lotus japonicus Gifu genome v1.2.
GGAAGAAAGCCCATGAGGACCATAGACAAGAGAGTTGAAGAAATGGTGGTTTCTCATACTACAAAAACAGTCTGGCTAGT AGCTTAGCTATTTGTGTATTTGCATGTTAGAAATAGAATCTCACAGGAACTGAGTTTCCCATGTTTCTTGAGGATTTGGT GCTGGGTCTATGCCTTTGTTTCTTGTTGTTGCCTTGTCTTAAGACTTTGCAATCTATGGAAAATATGTTTTCTTGCCAAT CACATACCTCTTTTCTGATATAGGTTCCTCTATTACAGGTTTTTTTTGTTTTGTTTTGTTGGATGTTCTGTCAATAATAT GTCTAAACTTGCCTCTCTTGAAGAGTCTCTTTTGAATGGTGACTCTAGTGTAAGCAACAATTCTAATCCCAAAAAGACCA GAGAAAATGAAAATTTGACAAGTTATTCAAAGGCTGGGTTTTTCAGCATTCTTACTTTCTCATGGATCACTCCACTAATA ACACTGGGATATAAGAAGACTTTAGAACATGAGGATCTCCCACTGCTTGCTAACACTGACAGTGCCTATGGGACTTTTCC AACTTTCAGAAACAAGCTTGAGTCAGAGTGTGGTAGTGCTAGTAGAGTCACCGCTCTTAAGCTTGCTAAAGTGTTAATCT TCTCAACATGGCAAGGGATTCTTGTATCAGGCTTGTTTGCATTCTTGTTCACATGTGCTTCTTATGTTGGACCCTACCTT ATTGAAAACCTAGTTCAGTATCTCAATGGGGAAAACAAGTCTAAAAATGAAGGCTATGTTTTGGTTATGGTATTTGTTGC AGCAAAGCTTGTGGAGTGCCTTTCGCAGCGGCAATGGATGCTTAGGTTCCAGCAGGTTGGGGTTAGGATGCAATCAATGT TGGTGGCAATGATCTATGCAAAAGGTTTGACCCTTTCATCTCAATCAAAAGAGGGTAACAGCAGTGGGGAAATCATCAAT TTATTGACTGTTGATGCAGCAAGGATTGGTGAATTTTGTTGGTACATGCATGATCCATGGATGTGTGTTCTGCAAGTTGG TTTGGCATTGTTGATTCTTTGTAGAAGTGTAGGCGTCGCTTCTGTTGCCGCTTTTGCTGCCACAGTAATTGTGATGCTGC TAAACCTTCCTGTGGCATCATTGCAAGAGAAGTTCCAAGGTAAGGTGATGGAGTTCAAGGATAAAAGAATGAAGGCTACA TCTGAGATTCTATCAAATATGAGGATCCTGAAACTGCAAGCATGGGAAATGAAGTTCTTATCGAAGATTTTTCACCTTAG GAAGACAGAGGAGCTATGGCTAAAGAAATTTCTTCTTGGCACAGCAGTTATTAGATTTCTCTTCTTTAACGCGCCTACTT TTGTTGCTGTGGTTACTTTTGGGGCTTGCGTTCTTATAGGCATCCCACTTGAATCAGGGAAGGTCTTATCTGCTCTTGCA ACATTCAGAATTCTTCAAATGCCAATCTATAGTCTTCCTGACACAATTTCAATGATTGCACAAACTAAGGTTTCCCTTGA TAGGATTGCATCGTATCTTCGCCTAGATGAGTTACAGAATGATGTGGTTGAGAAGCTTCCAAGAGGTAGTTCTGATGTAG CAGTTGAATTTGTAGATGGAAATTTCTCTTGGGATTTATCTTCTGTTAATCCAACATTGAAAGACATAAATCTTAGAGTT TTTCATGGTATGAAGGTTGCTGTTTGCGGCACTGTCGGATCAGGCAAGTCTACTTTACTTTCATGTATATTGGGTGAAGT ACCAAAGCTATCAGGAACCCTGAAGGTGAGTGGAACAAAGGCCTACGTTGCTCAGTCACCATGGATTCAGAGTGGCAAGA TAGAAGAGAACATACTATTTGGTAAAGAGATGGACAGGGAAAAGTATGAGAAGGTTCTAGAAGCATGTTCCTTGACAAAA GACCTTGAGGTTCTACCATTTGGTGATCACACCATTATTGGGGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAG AGTGCAAATAGCCCGTGCTCTCTACCAAGATTCTGACATGTATCTGCTTGATGATCCCTTCAGTGCTGTGGATGCTCATA CAGGATCGCATCTCTTCAAGGTACTAGTTTTCTAAACTCTACTTTTCTCAGTGCAATCTGTTTTTGGGGTAGAGTTAGGC TTAACCTGAATTCTGATAAAGATATTGATACAATCCTCTAATCTATCCGAACATTCTAAATTTTAGAGAGTATTATTAAG TTCGCTGTACTCTTATGTAAATGTTTCTATCCTTTTTTGCATTTTTAGGTGTTTCTCCAAGTGGAACCATCATCACTTGT ATAATGAGAAAAGTTTGTGGAACTTCATGTTTCTGATTTCGTTAGGTTCCATTAGTATATTATGGACATGGACGCATATA TAACCTCATGGAATTGAGTTTTTATTCTTTCAGTGATAGATGAACTTCAAATACATGTAAACTAGTTTTTAATGTTTATA ACTGTTCTGTTTCAGGAGTGTTTGCTTGGGCTTTTGAAAACAAAAACTGTGATATACGTAACTCATCAAGTAGAGTTCTT ACCTGATGCTGATCTAATATTGGTGAGTGATTCACAGATTTCATGCTTATGAATGAATTCAAACATCATAACTCCCTATT TTCTCAGTATTTTTCTTATTTAGGTCATGAGAGAAGGAAGGATAGCACAATCAGGAAAATACAATGATATTCTCCAGTCA GGCACTGATTTTATGGACCTTGTGGGTGCACATAGAACAGCTTTGTCTTCAATTAAGTCCTTAGAGAGAAGGGACACATT TAAAACATCAAGTATCACCATGCAAGATGCAGATGCATTAAGTGGTTTTGAACTTGAGCAGACAGTGGAAAACAAAGATG GTCAAAATGGCAATTCAGATGATACAGTTGAGCCAAAAGGGCAACTTGTTCAAGAAGAAGAAAGGGAAAAGGGTAGAGTT GGGTTTCAAGTCTACTGGAAATACATCACAATAGCTTATGGAGGAGCTCTTGTACCCTTCATATTACTATCACAGACGCT AACAGTAGTTTTTCAGATTGCAAGCAATTATTGGATGGCTTTGGCAACTCCTGTTGCAGAACCCGATATTGAAAGCTTTA AACTCATGGTTGTCTATGTTGTTTTGGCAATTGGAAGTTCCTTCGGCACCCTTGCCCGTGCAGTTCTTGCTGTGATAGCT GGATACAAGACAGCCACCATGCTCTTCAATAAAATGCATTTATGCTTTTTCCAAGCACCAATGTCATTTTTTGATTCCAC CCCAAGTGGGCGAATCCTTAATAGAGTATGTCTTAACATGTTAATAATTCTTCACTTGTTTCATGGCTTAGTGCATTAAT TTGTATATCAATTTTTTTTTCTATCTTTCTCCCTTCAAATTACCATATTGAATGTAACTGTCTTTCTAAATTTTAGTTTT GCTTTTTGTTGCAGGCTTCCACAGACCAAAGTGCAATAGATATGACTATTCCAAATCTTTTATGGGGAATTACCTTCAAT CTGATTCAGATCTTTGGAAACATTTTTGTGATGTCTCAAGCTGCATGGCAGGTGTTCATAATATTGATTCCTGTGATGGC AGCTTGCATATGGTACCAGGTAGTTTTCCGGATAATGTCTGGCCTACATCATTTGGAAATATTCACATTAAATGTCACCA AATGATTCTGATTTTGACTTCTTATTGATCAAATATTTAACATAAAAAATAAGTATAAACAAAAGCCTTATCCCACTAAG TGAGGTTGGCTTTATGAATATGTTTGACATTACAGTGAAAACAATAGCATTATATTTGCTAACAGTGTGCTTCTATATAT GCAGCAATACTACTCAGCATCAGCACGGGAATTGGCACGATTAGTCGGTACATGCCAAGCTCCGGTTATACAACATTTCT CTGAAACGATTTCTGGGTCAACAACCATAAGAAGTTTTGAACAAGAATCAATATTTAATGACACGAATATGAAATTGATA GACAAGTATTCCCAACCCAAATTATACAGTGCTATTGCAATGGAATGGCTGAGTTTCAGGTTGGATCTTCTATCCTGTAC CGTATTTGCCTTCTGTTTGGTGTTCTTGATATCTTTTCCAAGTTCAATTACTGATCCTGGTGAGTAGTTGAAATTACATA CATTTACTTGTCACACTCCTTATAACACCAGGTATATATATAACTTTAATCCTTTTCGAACTTCACATGTATTTCTGTCT TAGGCATTGCGGGATTGGCAGTGACATATGGGCTTAATCTAAATTCTATACAATTTAATATGATCTGGTTTCTTTGCAAT TTGGAGAACAAAATTATATCTGTAGAAAGAATACTTCAGTACACCTCCGTCCCAGGTGAAGCTCCTCTTGTAATCAAAGA CAACCAACCAGATCATTCTTGGCCGTCATTTGGAGAGGTTCATATCCAGGATTTACAGGTATCTTTCAGAAGTTATTCAT TTTGAATTGAATACTAGAATTAGGTCAAAATCTAGCTTAGGACTTTCAGGGTTGCTCTACCCTTTATAAGGACTATTTTG GCCATATCTCTAGTCAATGTGAGATTTAGTAACAGTATTTATCTATCTATCCTTAATGAGGCAGTGTGTGATGCAGGTTC GGTATGCTCCTCACCTGCCTCTTGTTTTACGGGGTCTTACTTGCACTTTTACTGCTGGAGCAAAAACTGGCATTGTGGGA AGAACAGGAAGTGGAAAATCAACTCTGGTGCAAACACTTTTCCGACTTGTTGAACCTGTTGCTGGAAAAATCTTGATAGA TAACATTAACATATCTTTGATTGGACTTCATGATTTACGGTCCAAACTAAGCATTATTCCTCAGGATCCAACAATGTTTG AAGGGACTGTAAGAAACAACCTGGACCCTTTGGAAGAGTACACAGATGAACAAGTTTGGGAGGTAATTTAGTTTTGCTTG ACACTAAGAAGAAGTTTCCGTTTTAGTCTTTAGTACCAGTACATATTAATCTATTTCATGATATATTTTAGGCTCTAGAT ATGTGCCAACTTGGAGATGAAATAAGGAAGAAAGAAGGGAAGCTTGACTCCTTAGGTATGAATTCTGAAACTTTGAACAA ATATGTTAGGATGTGTTACAAGTTATAATTAGATGTATAAATGTGGTGAGAATCTACTACTTACCATGATGAGTTCTGCA GTTACTGAGAATGGAGGAAATTGGAGTATGGGTCAGAGGCAATTGGTCTGCCTTGGCCGGGTTCTTCTTAAGAAAAGTAA GATTTTGGTGCTTGATGAAGCAACTGCATCAGTTGACACAGTCACAGATAATATTATTCAGCAAACAGTTAAGCAGCATT TTTCAGAATGCACAGTCATTACAATTGCTCATAGAATAACTTCAATCCTAGACAGTGACATGGTTCTGTTTCTAAATGGA GGCAAGCAATTTTTTCCCCTTTCTTCATCTTTATTTGTCAATTTTTATTTTCTTCTCTAGCTCATAAATGTGGACCCTGG ACATGGTTTCTCTTCATATTGATCCTGCAGGGCTAATTGAGGAATATGATTCACCAAAGAAACTGCTTAAGAACAAGTCT TCAGGTCTTGCTCAACTGGTTGCAGAATACACAAGGAGGTCAAACTCTGGTTTTGGAAGTTGAACTGAATCTGAATTAAT GTCACCAACAATATATGTTGTTACGCAGAGATTTTACAGTTACACATATTTTCTCAGATACTTGTATGTGACTCACTCTA TATGGCTATATCACAAATAAGTGCTTGTCTGATGTTATTAAATAATTAATGATATAAATGGCCGACCAACATTTAGCTAG CTATAAACCGAACTGTAAAATGATACCTATGCATACCTGAGAAATTAATATGGACATCCGAACTCTCTTCTAGGAGAACC AGCATTTTAGTTTGCATGGATGACAGAACACTTTCTGGGTGATCATCTCTAAC
CDS sequence (LotjaGi6g1v0148200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAGAAGGAAGGATAGCACAATCAGGAAAATACAATGATATTCTCCAGTCAGGCACTGATTTTATGGACCTTGTGGG TGCACATAGAACAGCTTTGTCTTCAATTAAGTCCTTAGAGAGAAGGGACACATTTAAAACATCAAGTATCACCATGCAAG ATGCAGATGCATTAAGTGGTTTTGAACTTGAGCAGACAGTGGAAAACAAAGATGGTCAAAATGGCAATTCAGATGATACA GTTGAGCCAAAAGGGCAACTTGTTCAAGAAGAAGAAAGGGAAAAGGGTAGAGTTGGGTTTCAAGTCTACTGGAAATACAT CACAATAGCTTATGGAGGAGCTCTTGTACCCTTCATATTACTATCACAGACGCTAACAGTAGTTTTTCAGATTGCAAGCA ATTATTGGATGGCTTTGGCAACTCCTGTTGCAGAACCCGATATTGAAAGCTTTAAACTCATGGTTGTCTATGTTGTTTTG GCAATTGGAAGTTCCTTCGGCACCCTTGCCCGTGCAGTTCTTGCTGTGATAGCTGGATACAAGACAGCCACCATGCTCTT CAATAAAATGCATTTATGCTTTTTCCAAGCACCAATGTCATTTTTTGATTCCACCCCAAGTGGGCGAATCCTTAATAGAG CTTCCACAGACCAAAGTGCAATAGATATGACTATTCCAAATCTTTTATGGGGAATTACCTTCAATCTGATTCAGATCTTT GGAAACATTTTTGTGATGTCTCAAGCTGCATGGCAGGTGTTCATAATATTGATTCCTGTGATGGCAGCTTGCATATGGTA CCAGCAATACTACTCAGCATCAGCACGGGAATTGGCACGATTAGTCGGTACATGCCAAGCTCCGGTTATACAACATTTCT CTGAAACGATTTCTGGGTCAACAACCATAAGAAGTTTTGAACAAGAATCAATATTTAATGACACGAATATGAAATTGATA GACAAGTATTCCCAACCCAAATTATACAGTGCTATTGCAATGGAATGGCTGAGTTTCAGGTTGGATCTTCTATCCTGTAC CGTATTTGCCTTCTGTTTGGTGTTCTTGATATCTTTTCCAAGTTCAATTACTGATCCTGGCATTGCGGGATTGGCAGTGA CATATGGGCTTAATCTAAATTCTATACAATTTAATATGATCTGGTTTCTTTGCAATTTGGAGAACAAAATTATATCTGTA GAAAGAATACTTCAGTACACCTCCGTCCCAGGTGAAGCTCCTCTTGTAATCAAAGACAACCAACCAGATCATTCTTGGCC GTCATTTGGAGAGGTTCATATCCAGGATTTACAGGTTCGGTATGCTCCTCACCTGCCTCTTGTTTTACGGGGTCTTACTT GCACTTTTACTGCTGGAGCAAAAACTGGCATTGTGGGAAGAACAGGAAGTGGAAAATCAACTCTGGTGCAAACACTTTTC CGACTTGTTGAACCTGTTGCTGGAAAAATCTTGATAGATAACATTAACATATCTTTGATTGGACTTCATGATTTACGGTC CAAACTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGGACTGTAAGAAACAACCTGGACCCTTTGGAAGAGTACA CAGATGAACAAGTTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGAAATAAGGAAGAAAGAAGGGAAGCTTGACTCC TTAGTTACTGAGAATGGAGGAAATTGGAGTATGGGTCAGAGGCAATTGGTCTGCCTTGGCCGGGTTCTTCTTAAGAAAAG TAAGATTTTGGTGCTTGATGAAGCAACTGCATCAGTTGACACAGTCACAGATAATATTATTCAGCAAACAGTTAAGCAGC ATTTTTCAGAATGCACAGTCATTACAATTGCTCATAGAATAACTTCAATCCTAGACAGTGACATGGTTCTGTTTCTAAAT GGAGGGCTAATTGAGGAATATGATTCACCAAAGAAACTGCTTAAGAACAAGTCTTCAGGTCTTGCTCAACTGGTTGCAGA ATACACAAGGAGGTCAAACTCTGGTTTTGGAAGTTGA
Protein sequence (LotjaGi6g1v0148200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MREGRIAQSGKYNDILQSGTDFMDLVGAHRTALSSIKSLERRDTFKTSSITMQDADALSGFELEQTVENKDGQNGNSDDT VEPKGQLVQEEEREKGRVGFQVYWKYITIAYGGALVPFILLSQTLTVVFQIASNYWMALATPVAEPDIESFKLMVVYVVL AIGSSFGTLARAVLAVIAGYKTATMLFNKMHLCFFQAPMSFFDSTPSGRILNRASTDQSAIDMTIPNLLWGITFNLIQIF GNIFVMSQAAWQVFIILIPVMAACIWYQQYYSASARELARLVGTCQAPVIQHFSETISGSTTIRSFEQESIFNDTNMKLI DKYSQPKLYSAIAMEWLSFRLDLLSCTVFAFCLVFLISFPSSITDPGIAGLAVTYGLNLNSIQFNMIWFLCNLENKIISV ERILQYTSVPGEAPLVIKDNQPDHSWPSFGEVHIQDLQVRYAPHLPLVLRGLTCTFTAGAKTGIVGRTGSGKSTLVQTLF RLVEPVAGKILIDNINISLIGLHDLRSKLSIIPQDPTMFEGTVRNNLDPLEEYTDEQVWEALDMCQLGDEIRKKEGKLDS LVTENGGNWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTVTDNIIQQTVKQHFSECTVITIAHRITSILDSDMVLFLN GGLIEEYDSPKKLLKNKSSGLAQLVAEYTRRSNSGFGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 675 | 675 | 0.0 | – | |
| Phobius | 1 | 102 | 102 | - | – | |
| PANTHER | 1 | 675 | 675 | 0.0 | – | |
| MobiDBLite | 68 | 92 | 25 | - | – | |
| MobiDBLite | 68 | 83 | 16 | - | – | |
| Gene3D | 80 | 413 | 334 | 5.8E-34 | ||
| Phobius | 103 | 133 | 31 | - | – | |
| TMHMM | 111 | 133 | 23 | - | – | |
| CDD | 116 | 407 | 292 | 1.5708E-90 | – | |
| SUPERFAMILY | 117 | 414 | 298 | 2.09E-48 | ||
| ProSiteProfiles | 118 | 395 | 278 | 33.406 | ||
| Pfam | 119 | 357 | 239 | 1.0E-28 | ||
| Phobius | 134 | 152 | 19 | - | – | |
| Phobius | 153 | 180 | 28 | - | – | |
| TMHMM | 153 | 175 | 23 | - | – | |
| Phobius | 181 | 227 | 47 | - | – | |
| TMHMM | 223 | 245 | 23 | - | – | |
| Phobius | 228 | 245 | 18 | - | – | |
| Phobius | 246 | 250 | 5 | - | – | |
| TMHMM | 250 | 267 | 18 | - | – | |
| Phobius | 251 | 270 | 20 | - | – | |
| Phobius | 271 | 336 | 66 | - | – | |
| TMHMM | 336 | 358 | 23 | - | – | |
| Phobius | 337 | 359 | 23 | - | – | |
| Phobius | 360 | 678 | 319 | - | – | |
| TMHMM | 368 | 390 | 23 | - | – | |
| Gene3D | 415 | 668 | 254 | 8.3E-78 | – | |
| SUPERFAMILY | 423 | 657 | 235 | 3.92E-66 | ||
| CDD | 430 | 650 | 221 | 5.4043E-125 | – | |
| ProSiteProfiles | 432 | 666 | 235 | 18.834 | ||
| Pfam | 450 | 597 | 148 | 1.2E-30 | ||
| SMART | 458 | 643 | 186 | 6.6E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0148200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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