Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0149700 |
| Transcript ID | LotjaGi6g1v0149700.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Tornado 1; TAIR: AT5G55540.1 tornado 1; Swiss-Prot: sp|Q9FJ57|TRN1_ARATH Protein TORNADO 1; TrEMBL-Plants: tr|A0A0B2SG74|A0A0B2SG74_GLYSO Protein NLRC3; Found in the gene: LotjaGi6g1v0149700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:42565745..42571698) extracted from Lotus japonicus Gifu genome v1.2.
GTGGAATTACAATGAGTGTCTTGAGTCAATCATACATCACTTTCTTTTCCATTTTATTTTCACTCACTTTCTCTTCCTAT CTCTCTCTCTTTTCTCGTATCATACCATTCATAATACAGTTGTTTATTGCATTTCTCCCTCTAAGGTTCCTGTTTCTCCC TTGGTGTGAGTGTAAAAGAAGTGTGTACAAACTTTTAAATGAGAATGAAAAACAGCTAGCACACTTCAAGAATCAATGCC AGTGATAATATTTTATGCTCAAGTTAAGAATATTGCAAGAGTGGCTCAAACAAGTCTCATGAACTCACTGTGAAAGGCTA AACTGACAAATGTTTGTCCATTGTCTTCAAAAAAACCACTTGAATTCCAAGTTATTGTTTGCCTATGTTCTGGTAAAGAG CTAAGTTTCTCCAACTTTGAAAGATTCTCAAGTGATGGCATCAAATCAGAACCTGAAGGAGCTACAATGGGCTCTACAAG CAATCAATTCAGAGGTCCTAAACCTGCACAGTATCTCCTTCTACCTTTCTCAACCAACTTCAGCTTGTTACCAAGAAACA GATAACTCCATAAACATAAACATCTCCAAGGAAAATCTTCCATTCTTCTCTGACCTCTTGACAGAATTAGCAGCATCCAA GAGCACCAAATCCACCTTGAGAAACTTGGAGTTCCACAGAGTTGAATGGGAAATACAACAGGTAAGAAACCTTGGCACCT TGCTGGGGAATAATCAAAGCATACAGCAAGTTGTTTTTCGAAGAAACAGGTTCAATGGGAAAACCCTATCAGACCTTTCT GACATTCTGAAGGCAAATAAAGTGATCAAAGAGATCATGCTTTCAGAATCAGGCATTGGATCTGTTGGAGCTGGACTCAT TGCTTCTGCTCTTATGGTGAATGAGAGTTTGGAGGAGCTTCAGATATGGGAAGATTCCATAGGATCAAGAGGTGCTGAGG AGCTTTCCAAGATGATTGAAGTTAACCCAACTCTTAAATTGTTGACAATTTTTGACTCCAATGCAATTACAGCTACCCCT CTGATATCTGCAGTTTTGGCAAGGAACAGAAACATGGAAGTTCATGTTTGGAGTGGAGAAAATGGTGAAAAAAGTTCCAA GGTGGTTGAGTTTGTGCCTGGGAACAGCACACTTAGAATTTACAAGCTTAACCTCTCAGGTGCTTGCAGGGTTATATGCT CCTTAGGAATGAACTCCACTGTCAAATCTCTTGACATGACCGGAGTCAAGCTAAAATCGCGGTGTGCGAAGGAACTTAGA TGGGTTTTAGAACAGAACCAGACCCTTAAAGAGCTGAACTTGTCCAGAACATGCCTTAAAGACAAGGGCATTGTGTATGT TGCAGCTGGACTCTTCAAGAATCATAGTCTGCAAACCTTACATCTAACTGGAAATTGGTTCAGTGGAGTAGGTGTGGAGC ATCTACTCTGCCCTCTGAGTAGATTTTCAGCCTTGCAAATGCAAGCCAACATTACTTTGAAGTGTGTTACTTTTGGAGGG GGGAGAACAAGAATAGGAAGGGATGGTTTAGCTGCTCTCACACAGTTTCTAACAACCAATGAGACAGTGAGGAAGTTGGG AATACATGATGATGAGAGTTTGAGATCAGATGACTATGTTAAAATCTTCAAGAGCTTAGAGAAGAATGCTAGCTTGAAAT GTTTGTCATTGCAAGGATGCAAAGGTGTGCAAGGAGAGACGTTGCTGCAGACAATTATGGAGACACTGCACATAAATCCT TGGATTGAAGATATTGATCTCTCCAGAACACCTTTACACAGTTCTGGAAAGACAACTGGGATTTATCAAAGATTGGGGCA GAATGAGAACACTGAACCAGAAATGGATTTGCTCAAGGACATGCCACTAACAGAACCCAAGAGTTGCAGAGTTTTCTTCT GTGCGCAAGAATGTGCAGGTAAGGTTGATTATTTGTCTTGGATATATTAAGGGTGTATTCGGGTAAGCAACTTAATTAAG CTCTTATGGCAATAAGCGCTTATCATATAAGTTCTTAGTCATAAAGCTAATTTCAGAAACTTATTTAAATAAACTGAAAA TAAGTTATAGGTAAGTATAAGCTCTTATTCATAAGCTAATCTGAACAGCTTATGAAAATAAGATCAAAGTAGTTTATAGG TAGGCCAGAAGTTATTTACATACGCTCTCAGAATCACTTGCATAAGCGCTTATGCTATAAGATAAAATCAAATAAGCTCT TCCAAACATGGTCTAATTTCATGAAACACCACTTCAAAACATATGTTCATGAATCTAAGTTAAGCTCTATTATTTTCTTA TAAACACAAGATAAAAGAAAATCAACTTGAATCATATTTTCAATTATATTTTTCAGGCAAAACAACACTTTGTCATTCAA TATCACAAAATTTCTCTGCTTCGACGCTTCCCTACTTGGATCAAGTCAGAACAATTGTGAACCCTGTGGAGCAGGCTGTA AAAACAGTAGGAATGAAGATAAAAACTTTCAATGATGAGGATACAAAGATTTCAATATGGAATCTTGCTGGTCAACATGA GTTTTTCTCTTTACATGATCTAATGTTCCCAGGGCATGGTAGTGCATCATTTTTCATTATCATATTGAGTTTATTCAGGA AGCCAAGTAACAAAGAACCAAAAAGCACAGAAGAGATTGAAGAAGACCTGCAATATTGGCTTCGGTTCATAGTTTCCAAC TCCAAAAGAGCAGTGCAGCAATGCATGCTACCAAGTGTTGCTGTTGTTCTCACACACTTCGATAAAATTAACCAATCTTC GCAAAATTTTCAGCAAACAGTTGATTCCATTCAGAGATTGAGAGATAAGTTCCAAGGCTTTGTAGACTTCTACCCAACTG TATTTACAGTTGATGCAAGATCATCAGCATCGGTTAGTAAACTCACTCATCACATCCGAAAGACGTGCAAGACGATTCTC CAAAGAGTGCCGCGAGTTTATCAACTTTGCAATGATCTCATACAGATTTTATCAGACTGGAGATCCGAGAATTACAACAA GCCAGCAATGAAGTGGAAGGAGTTTGGTGAGCTATGCCAAGTAAAAGTCCCACCTTTGAGAATTCGATCAAGACATTATA ACAAAGAGGTGGTGGAAATGAAGAGAAAAGCTGTTGCAACTTGTCTTCATCACATTGGTGAGGTGATTTACTTTGATGAG TTGGGGTTTCTAATTTTAGATTGTGAGTGGTTTTGTGGTGAAGTACTTGGTCAGCTCATAAAACTGAATGTTAGAAAGCA ACACTCCTCAGAAAACAGTGGATTTATTAGCAGGAAGGAACTGGAGAAAATCTTGAGGGGAAGCTTACAGAGCCCGATTC CCGGTATGGGTTCAAAGGTGTTTGAGAACTTAGATGCTAGTGACCTTGTGAGGATGATGCTAAAACTTGAACTCTGTTAT GAGCAAGATCCATCAGATCCAAATTCTCTGTTATTGATTCCCTCCATTCTTGAAGAAGGAAGAGGAAAGCCTCAGAGGTG GCAGCTAAGCACACCAGATTGCATTTATGCAGGACGTCATCTCGAGTGTGATGATTCAAGCCACATGTTTCTAACTCCAG GATTCTTCCCTCGTTTACAGGTAAGAGTTTCTCTAAGCGTGTTCCCTTTTTCCCCTTCAGTATCAACTTTTGGAATTGTT CTTGCAAATTTTTTTTCTTATTTTCCACTGAAATGGTTCCTGCACTATCTAGAAGTTTTTATCCATTGTTGGTTACTTTT TTTTTATGAAGGAAATGAGGTGCACAAAATACATGTAACACGTAACAAATCAATTTATCCACTTCTTCCTACCTGATTAT ATTTTGATCTTCACTTCTAGATCTTTAAAGCTACAATATCCAGAACAATTGGAATTTTTCCTGATTACAACTTTCTGATT GAACATTTATCAATTGATGTTGCAGGTGCACCTTCACAACAGAATAAAGGCTCTACAGAATCAACATGGTGCAACTTACT TTCTTGAGAAGTACCTCATTTCAATCAGCATTAATGGAATCTACATCAGAGTAGAGCTTGGAGGACAACTGGGTTACTAC ATTGACATCCTTGCATGCTCCACCAAAAACTTGACAGAAACTTTAAGAGTCATTCAGCAACTTATAATCCCAGCAATTCA AAGCGTTTGCCATGGAATCACCATGACTGAAAATGTCATTAGACCTGAATGTGTGCGAAATTTAACACCTCCTAGATACA GAAGAACTCAATTTGTTTCTCTTCAGCAACTGAAACAAGCACTACTTTCACTTCCAGCAGAAAGCATGTATGATTATCAA CACACATGGAGTTCAGTTCTGGACTCTGGTAGGCCTACTCTCCAAGAAGGGTTTGATTTAGCACGAGACCTTTTATCGGA TGATGATTTCCGGGAAGTGCTGCATCGAAGGTATCATGACCTGCACAATCTCGCTCAAGAGCTGCAAGTCCCACCTGAAA ACAACATAGAAGGGCAAGATCAATCTATAACTTCAAGCAGTGAATCTGGAACAGTTGACCCAACCTTTGGGGGCATTGCA AAAGGGGTTGAAGAAGTTTTGCAAAGACTAAGGATTATTGAACAAGAAATAAGAGACTTGAAGCAAGAAATCCAGGGGCT GAGATATTATGAACATAGACTCCTCCTCGAGCTTCATCGCAAAGTGAACTACATAGCAACCTTCAATCTTCAGGTTGAGG AGAGGAAAGTACCTAACATGTTCTACTTTGTAAACACAGAAAACTACTCAAGAAGACTGATCACAACCATGGTTTCTGGC ATGACTGCTCTCCGGCTCCACATGTTGTGCGAGTTCCGGGGACAGATGCACGTTGTTGAGGATCAAATGGGGTGTGAAAT GATGCAAGTTGATAATATGGCTGTGAAGGCTTTGGCTCCATACATGAAGAAGTTCATGACGCTGGTAACTTTCGCTCTTA AAATCGGAGCTCATCTCGCGGCTGGAATGGGGCAAATGATACCAGACTTGGGCAAGGAAGTGGCTCATTTGACTGGCTCT TCAGTTCTCTTTGGTGCAGCTGCAGCTGGTGCTGTAGGGGCTGCAGCAGGTATGGGACGGAGAAACAGGTCCATGGAAGG TTCAAGAGGCATTCAACAGGATTTAAGAGCTGCACAGCAATGGGTGGTTGATTTCTTAAGGGAAAGGAGATGCTCCACAG GGAAGGATATTGCAGAGAAGTTTGGCCTGTGGAGAGTAAGGTACAGGGACAGTGGTCAAATTGCATGGATCTGTAGGAGG CACATTTACTCCAGATCTGCAGAGATAATTGAAGTGCCAGTTTGAAACTGCAGAAATCCTTGTATAGCAAGATGAACCTT AGCTTTCAAGTTTTTTTTTTCCTTTTATATATTTCTAATATGAATATGGCATGTATTCAAGTTCTCCAATACATTTAAAG GAGTATAGATGTTGGTCTAGTAGATTTCAAATTTTAATTTCCAACATGATGAAAGCTTGAACACCAGCAATTCTCCAATA TAGTTGCATATTTGGATTAGTTTCTATTTCATTAGAATATACTTTAAAACCAAGAAGCTTCTCATAGTGTGTTTGGATTA GTGACGGGTAGACACTCCAAAGTAGGGTAGATAACCCAAAGCACGATAACCCCAAAAGCACAATTTGTAACTTCAAAGTA GGGTAGACAATCCAAAGCACGATAACCCTAAAAGCTACAATTTGTAACTTCTCACCAAAAGTGATTATAGAGCTCCTAAC CGTACATTATCAAAGAAGGTTCTCCCTAAAATTAATTCTGGCTTCAAAATCAACTATGAATGTTTGGGTTCACAATGGAA AATCACATAAGACCAAACTCATGATGGACAATCACAAAAGCTAAGGGAGGTTGCTTCTTTTCACTGTGATTTTGACTTCA CCATGATTTCTCATTATGTATCCACGCATGTGTT
CDS sequence (LotjaGi6g1v0149700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCAAATCAGAACCTGAAGGAGCTACAATGGGCTCTACAAGCAATCAATTCAGAGGTCCTAAACCTGCACAGTAT CTCCTTCTACCTTTCTCAACCAACTTCAGCTTGTTACCAAGAAACAGATAACTCCATAAACATAAACATCTCCAAGGAAA ATCTTCCATTCTTCTCTGACCTCTTGACAGAATTAGCAGCATCCAAGAGCACCAAATCCACCTTGAGAAACTTGGAGTTC CACAGAGTTGAATGGGAAATACAACAGGTAAGAAACCTTGGCACCTTGCTGGGGAATAATCAAAGCATACAGCAAGTTGT TTTTCGAAGAAACAGGTTCAATGGGAAAACCCTATCAGACCTTTCTGACATTCTGAAGGCAAATAAAGTGATCAAAGAGA TCATGCTTTCAGAATCAGGCATTGGATCTGTTGGAGCTGGACTCATTGCTTCTGCTCTTATGGTGAATGAGAGTTTGGAG GAGCTTCAGATATGGGAAGATTCCATAGGATCAAGAGGTGCTGAGGAGCTTTCCAAGATGATTGAAGTTAACCCAACTCT TAAATTGTTGACAATTTTTGACTCCAATGCAATTACAGCTACCCCTCTGATATCTGCAGTTTTGGCAAGGAACAGAAACA TGGAAGTTCATGTTTGGAGTGGAGAAAATGGTGAAAAAAGTTCCAAGGTGGTTGAGTTTGTGCCTGGGAACAGCACACTT AGAATTTACAAGCTTAACCTCTCAGGTGCTTGCAGGGTTATATGCTCCTTAGGAATGAACTCCACTGTCAAATCTCTTGA CATGACCGGAGTCAAGCTAAAATCGCGGTGTGCGAAGGAACTTAGATGGGTTTTAGAACAGAACCAGACCCTTAAAGAGC TGAACTTGTCCAGAACATGCCTTAAAGACAAGGGCATTGTGTATGTTGCAGCTGGACTCTTCAAGAATCATAGTCTGCAA ACCTTACATCTAACTGGAAATTGGTTCAGTGGAGTAGGTGTGGAGCATCTACTCTGCCCTCTGAGTAGATTTTCAGCCTT GCAAATGCAAGCCAACATTACTTTGAAGTGTGTTACTTTTGGAGGGGGGAGAACAAGAATAGGAAGGGATGGTTTAGCTG CTCTCACACAGTTTCTAACAACCAATGAGACAGTGAGGAAGTTGGGAATACATGATGATGAGAGTTTGAGATCAGATGAC TATGTTAAAATCTTCAAGAGCTTAGAGAAGAATGCTAGCTTGAAATGTTTGTCATTGCAAGGATGCAAAGGTGTGCAAGG AGAGACGTTGCTGCAGACAATTATGGAGACACTGCACATAAATCCTTGGATTGAAGATATTGATCTCTCCAGAACACCTT TACACAGTTCTGGAAAGACAACTGGGATTTATCAAAGATTGGGGCAGAATGAGAACACTGAACCAGAAATGGATTTGCTC AAGGACATGCCACTAACAGAACCCAAGAGTTGCAGAGTTTTCTTCTGTGCGCAAGAATGTGCAGGCAAAACAACACTTTG TCATTCAATATCACAAAATTTCTCTGCTTCGACGCTTCCCTACTTGGATCAAGTCAGAACAATTGTGAACCCTGTGGAGC AGGCTGTAAAAACAGTAGGAATGAAGATAAAAACTTTCAATGATGAGGATACAAAGATTTCAATATGGAATCTTGCTGGT CAACATGAGTTTTTCTCTTTACATGATCTAATGTTCCCAGGGCATGGTAGTGCATCATTTTTCATTATCATATTGAGTTT ATTCAGGAAGCCAAGTAACAAAGAACCAAAAAGCACAGAAGAGATTGAAGAAGACCTGCAATATTGGCTTCGGTTCATAG TTTCCAACTCCAAAAGAGCAGTGCAGCAATGCATGCTACCAAGTGTTGCTGTTGTTCTCACACACTTCGATAAAATTAAC CAATCTTCGCAAAATTTTCAGCAAACAGTTGATTCCATTCAGAGATTGAGAGATAAGTTCCAAGGCTTTGTAGACTTCTA CCCAACTGTATTTACAGTTGATGCAAGATCATCAGCATCGGTTAGTAAACTCACTCATCACATCCGAAAGACGTGCAAGA CGATTCTCCAAAGAGTGCCGCGAGTTTATCAACTTTGCAATGATCTCATACAGATTTTATCAGACTGGAGATCCGAGAAT TACAACAAGCCAGCAATGAAGTGGAAGGAGTTTGGTGAGCTATGCCAAGTAAAAGTCCCACCTTTGAGAATTCGATCAAG ACATTATAACAAAGAGGTGGTGGAAATGAAGAGAAAAGCTGTTGCAACTTGTCTTCATCACATTGGTGAGGTGATTTACT TTGATGAGTTGGGGTTTCTAATTTTAGATTGTGAGTGGTTTTGTGGTGAAGTACTTGGTCAGCTCATAAAACTGAATGTT AGAAAGCAACACTCCTCAGAAAACAGTGGATTTATTAGCAGGAAGGAACTGGAGAAAATCTTGAGGGGAAGCTTACAGAG CCCGATTCCCGGTATGGGTTCAAAGGTGTTTGAGAACTTAGATGCTAGTGACCTTGTGAGGATGATGCTAAAACTTGAAC TCTGTTATGAGCAAGATCCATCAGATCCAAATTCTCTGTTATTGATTCCCTCCATTCTTGAAGAAGGAAGAGGAAAGCCT CAGAGGTGGCAGCTAAGCACACCAGATTGCATTTATGCAGGACGTCATCTCGAGTGTGATGATTCAAGCCACATGTTTCT AACTCCAGGATTCTTCCCTCGTTTACAGGTGCACCTTCACAACAGAATAAAGGCTCTACAGAATCAACATGGTGCAACTT ACTTTCTTGAGAAGTACCTCATTTCAATCAGCATTAATGGAATCTACATCAGAGTAGAGCTTGGAGGACAACTGGGTTAC TACATTGACATCCTTGCATGCTCCACCAAAAACTTGACAGAAACTTTAAGAGTCATTCAGCAACTTATAATCCCAGCAAT TCAAAGCGTTTGCCATGGAATCACCATGACTGAAAATGTCATTAGACCTGAATGTGTGCGAAATTTAACACCTCCTAGAT ACAGAAGAACTCAATTTGTTTCTCTTCAGCAACTGAAACAAGCACTACTTTCACTTCCAGCAGAAAGCATGTATGATTAT CAACACACATGGAGTTCAGTTCTGGACTCTGGTAGGCCTACTCTCCAAGAAGGGTTTGATTTAGCACGAGACCTTTTATC GGATGATGATTTCCGGGAAGTGCTGCATCGAAGGTATCATGACCTGCACAATCTCGCTCAAGAGCTGCAAGTCCCACCTG AAAACAACATAGAAGGGCAAGATCAATCTATAACTTCAAGCAGTGAATCTGGAACAGTTGACCCAACCTTTGGGGGCATT GCAAAAGGGGTTGAAGAAGTTTTGCAAAGACTAAGGATTATTGAACAAGAAATAAGAGACTTGAAGCAAGAAATCCAGGG GCTGAGATATTATGAACATAGACTCCTCCTCGAGCTTCATCGCAAAGTGAACTACATAGCAACCTTCAATCTTCAGGTTG AGGAGAGGAAAGTACCTAACATGTTCTACTTTGTAAACACAGAAAACTACTCAAGAAGACTGATCACAACCATGGTTTCT GGCATGACTGCTCTCCGGCTCCACATGTTGTGCGAGTTCCGGGGACAGATGCACGTTGTTGAGGATCAAATGGGGTGTGA AATGATGCAAGTTGATAATATGGCTGTGAAGGCTTTGGCTCCATACATGAAGAAGTTCATGACGCTGGTAACTTTCGCTC TTAAAATCGGAGCTCATCTCGCGGCTGGAATGGGGCAAATGATACCAGACTTGGGCAAGGAAGTGGCTCATTTGACTGGC TCTTCAGTTCTCTTTGGTGCAGCTGCAGCTGGTGCTGTAGGGGCTGCAGCAGGTATGGGACGGAGAAACAGGTCCATGGA AGGTTCAAGAGGCATTCAACAGGATTTAAGAGCTGCACAGCAATGGGTGGTTGATTTCTTAAGGGAAAGGAGATGCTCCA CAGGGAAGGATATTGCAGAGAAGTTTGGCCTGTGGAGAGTAAGGTACAGGGACAGTGGTCAAATTGCATGGATCTGTAGG AGGCACATTTACTCCAGATCTGCAGAGATAATTGAAGTGCCAGTTTGA
Protein sequence (LotjaGi6g1v0149700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASNQNLKELQWALQAINSEVLNLHSISFYLSQPTSACYQETDNSININISKENLPFFSDLLTELAASKSTKSTLRNLEF HRVEWEIQQVRNLGTLLGNNQSIQQVVFRRNRFNGKTLSDLSDILKANKVIKEIMLSESGIGSVGAGLIASALMVNESLE ELQIWEDSIGSRGAEELSKMIEVNPTLKLLTIFDSNAITATPLISAVLARNRNMEVHVWSGENGEKSSKVVEFVPGNSTL RIYKLNLSGACRVICSLGMNSTVKSLDMTGVKLKSRCAKELRWVLEQNQTLKELNLSRTCLKDKGIVYVAAGLFKNHSLQ TLHLTGNWFSGVGVEHLLCPLSRFSALQMQANITLKCVTFGGGRTRIGRDGLAALTQFLTTNETVRKLGIHDDESLRSDD YVKIFKSLEKNASLKCLSLQGCKGVQGETLLQTIMETLHINPWIEDIDLSRTPLHSSGKTTGIYQRLGQNENTEPEMDLL KDMPLTEPKSCRVFFCAQECAGKTTLCHSISQNFSASTLPYLDQVRTIVNPVEQAVKTVGMKIKTFNDEDTKISIWNLAG QHEFFSLHDLMFPGHGSASFFIIILSLFRKPSNKEPKSTEEIEEDLQYWLRFIVSNSKRAVQQCMLPSVAVVLTHFDKIN QSSQNFQQTVDSIQRLRDKFQGFVDFYPTVFTVDARSSASVSKLTHHIRKTCKTILQRVPRVYQLCNDLIQILSDWRSEN YNKPAMKWKEFGELCQVKVPPLRIRSRHYNKEVVEMKRKAVATCLHHIGEVIYFDELGFLILDCEWFCGEVLGQLIKLNV RKQHSSENSGFISRKELEKILRGSLQSPIPGMGSKVFENLDASDLVRMMLKLELCYEQDPSDPNSLLLIPSILEEGRGKP QRWQLSTPDCIYAGRHLECDDSSHMFLTPGFFPRLQVHLHNRIKALQNQHGATYFLEKYLISISINGIYIRVELGGQLGY YIDILACSTKNLTETLRVIQQLIIPAIQSVCHGITMTENVIRPECVRNLTPPRYRRTQFVSLQQLKQALLSLPAESMYDY QHTWSSVLDSGRPTLQEGFDLARDLLSDDDFREVLHRRYHDLHNLAQELQVPPENNIEGQDQSITSSSESGTVDPTFGGI AKGVEEVLQRLRIIEQEIRDLKQEIQGLRYYEHRLLLELHRKVNYIATFNLQVEERKVPNMFYFVNTENYSRRLITTMVS GMTALRLHMLCEFRGQMHVVEDQMGCEMMQVDNMAVKALAPYMKKFMTLVTFALKIGAHLAAGMGQMIPDLGKEVAHLTG SSVLFGAAAAGAVGAAAGMGRRNRSMEGSRGIQQDLRAAQQWVVDFLRERRCSTGKDIAEKFGLWRVRYRDSGQIAWICR RHIYSRSAEIIEVPV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 569 | 569 | - | – | |
| PANTHER | 2 | 1375 | 1374 | 0.0 | – | |
| SUPERFAMILY | 11 | 459 | 449 | 7.63E-41 | – | |
| Gene3D | 51 | 217 | 167 | 4.4E-20 | ||
| SMART | 128 | 155 | 28 | 54.0 | – | |
| SMART | 156 | 183 | 28 | 4.5 | – | |
| Gene3D | 232 | 349 | 118 | 5.2E-17 | ||
| Pfam | 287 | 307 | 21 | 0.015 | ||
| SMART | 288 | 315 | 28 | 0.52 | – | |
| Pfam | 315 | 337 | 23 | 0.0047 | ||
| SMART | 316 | 343 | 28 | 92.0 | – | |
| Gene3D | 350 | 478 | 129 | 3.5E-9 | ||
| SUPERFAMILY | 477 | 683 | 207 | 3.06E-9 | ||
| Gene3D | 490 | 694 | 205 | 2.3E-13 | – | |
| Phobius | 570 | 588 | 19 | - | – | |
| Phobius | 589 | 1245 | 657 | - | – | |
| Pfam | 750 | 925 | 176 | 1.2E-13 | ||
| MobiDBLite | 1092 | 1112 | 21 | - | – | |
| Coils | 1124 | 1151 | 28 | - | – | |
| Phobius | 1246 | 1268 | 23 | - | – | |
| Phobius | 1269 | 1279 | 11 | - | – | |
| Phobius | 1280 | 1300 | 21 | - | – | |
| Phobius | 1301 | 1375 | 75 | - | – | |
| Coils | 1375 | 1375 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0149700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…