Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0178500 |
| Transcript ID | LotjaGi6g1v0178500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent protein kinase, putative; TAIR: AT5G12180.1 calcium-dependent protein kinase 17; Swiss-Prot: sp|Q9FMP5|CDPKH_ARATH Calcium-dependent protein kinase 17; TrEMBL-Plants: tr|A0A072TK46|A0A072TK46_MEDTR Calmodulin-domain kinase CDPK protein; Found in the gene: LotjaGi6g1v0178500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:47037476..47040701) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGCAACTGTTGCTCCCAAGCCAACGCCGGCGACGCTCCCGAAGCAATGCCAGCCGGCGCCGACAAGGGAGAAACCAA CCAAAAAAGCAGCAACAACCATGCAGGAGGAGACAACCCTGCCACCACCACCGACCCTACCACCCCACCACCAACAACAT CCAAGCCGTCACCCTCACCCTTGCCTACTCCTCCTTCCTCAAAACCCACCAAGGCCGCCCCCGTCGGTCCGGTCCTGGGG CGGCCGATGGAGGACGTCAGGGCGACATATAGCATGGGGAAGGAGCTAGGGAGGGGGCAGTTTGGCGTGACTCACCTTTG CACCCACAAGACCACTGGACACCAATTTGCATGCAAAACCATTGCCAAGAGGAAGCTGGTGAACAAGGAGGACATAGAGG ATGTGAGAAGGGAGGTGCAAATCATGCACCATCTTACAGGTCAACCTAACATTGTGGAGTTGAAGGGTGCCTATGAGGAT AAGCAATCGGTGCATTTGGTGATGGAGCTTTGTGCTGGTGGTGAACTCTTTGATCGTATCATTGCTAAGGGACATTACAC AGAACGCGCTGCGGCTTCTTTGTTGAGAACGATTGTGCAGATTGTTCATACGTTTCATTCCATGGGGGTTATTCATAGAG ACCTTAAGCCTGAGAATTTCCTCTTGTTGAATAAGGATGAGAAGTCACCCCTCAAGGCCACTGATTTTGGTCTTTCAGTT TTTTACAAGCAAGGTTTAATTTATTTCTTACTTCTATCTCATCTCTATATATTTCTCTTTTAACCATGAGATGTCTGTGC TGGTTGCTCATCTCGTCCCTTAAGCATGAAGTCCGAGGTTCGATCATCACTTGTGAGAATGAAACACATTTCATAGCCAA CCTTTTGAGATTTTGTGCAAAATCCTGTCCCATTTGGTGCTCTTTCCATTCAGTCTTCCACCAATTAAGTTTGCTCCCAT GTAGGCATGAATATGACAATTATAATTTCACATGAGTGATTTATAAATGAAATCACGATTTGATTGATGAGGACATAGAA GGAGACACCAAATAAGGATAGGGGGCTTAAGTCTCATTTCCCTATCTCATTTTCAGTGTTAACTAAAGTATCCCACAACT GATAGTTATGAGACTAATCTCTCGCCCCACTATCAGCTGATCAATGAGTTCTTTCCATTCACAAGTGTTGAGAATCGAAC CCCAACCACTTACTTAAAGGACGAAGTGTTAAACCACTACGCAACTCACTTGATTATTCTACTATCTCATTGTTAATCGC TAAAATGATAATTTCAAACCTCAATATTATATGTCATATTCATTACACTAAAGAATCACTTACTGGTCAAATATGACAGA GGTTAAGTTTAGGAGGGATGGAAAAATTTCTTTTTGTATTAATTCTGGTATAAGAGAGTTCATTTACTCATTTACATATA ACAGAATCTTGGGTCTTCATATGCTACATGAAGCAAATTTTAATAGCCAATTTATGCTTTTGACAGGGGACACATTCAAA GACATTGTTGGAAGTGCATATTACATTGCACCTGAGGTCTTGAAGAGGAGATATGGGCCAGAAGTTGACATATGGAGTGT TGGTGTCATGCTATACATTCTTCTATCTGGTGTCCCTCCATTTTGGGCAGGTTTATATTTCATCTTGTTATTTTCATATA ACAATCTCTTAGTACAGAAAATTGTTTTGAAGAACAAAGATAAATGATTATTTATGTCAAATACTTTCTTCTAAATTTAA TGCATAGCTTGAAATTAACTGAAAAAACAATGAATTGGTTTGACAGAATCAGAACATGGTATATTCAATGCCATCTTAAA AGGCCACGTTGACTTCACAAGCGACCCATGGCCTTCAATTTCACCTGCAGCAAAAGATCTTGTAAGGAAAATGTTAAATT CAGATCCCAAACAGAGACTCACAGCACAAGAAGTTCTCAGTAAGTGACTTTTTTTACCTCACTTTCAACTCATTTGAAGA AAACAAAATGGTTGAAGAATTCATTTACAATTTCATGATTGAAACACAGATCATCCTTGGATCATGGAGGATGGAGAAGC ACCAGATAAACCTCTTGACAATGCTGTGCTCAATAGGCTCAAACAGTTCAGAGCAATGAACCAATTCAAGAAAGTTGCAC TAAGGGTACTTGTTGATTTGCCTTAACTATAATGAATATTTTACTTTTTCACACCCTTTAAATAAAATCACTCATTCCAG CAATTCTAACTCTAAATTTACATTTGAAAAGGTCATTGCTGGCTGTTTATCAGAAGAAGAAATCATGGGGTTGAAGGAAA TGTTTAGAGGGATGGACACTGACAACAGTGGAACCATTACAATTGAAGAGCTAAAGCAGGGGCTTGCAAAACAGGGGACC AAGCTAACAGAGCAAGAAGTTAAGCAGTTAATGGAAGCTGTAAGTTATCCTTCATTTCTGAAAGCCAAAACACCACTAAG CCAAAAACACATAGATTTTCTCATTCTTCTACAAATTACAGGCTGATGCTGATGGCAATGGAACCATAGATTACGACGAG TTCATCACAGCAACAATGCACATGAACAGAATGAACAGAGAAGAACATCTTTACACTGCCTTCCAATACTTTGATAAAGA TAACAGCGGGTAAGAAAACCAACTAGGTTCAAGATAATATATTTTCTGAACACCCTTTTGTCAACTCCTTGGTGCTTTAT TAAAATAAGTTGAGGTTCTAAATTTCTGATCTCATTTTTGTACCATATAAATGAATCAGGTTCATTACTACTGAAGAACT AGATCAAGCTCTCCATGAATATAACATGCATGATGGTAGGGACATCAAGGAAATCCTTCATGAAGTTGATGGAGATAATG TAAGTATATGTTTGGATCAACTTGGCTTTCATCAGTATCAATTCTAAAACCCATAAGCTAATCACATAAGCTTTTCCATA TAATTGATTCTGGTTTCAGAATGAATTGTACACGTTTTTACAAACATGCAATCTAATGTTGCATTGTTTATTTCTTGTGG AAATTCCTTTCATATTATCATATAGATCATATAGATGTTTGTCCATGGTTAGTGATGACAATGAAATCTGTGACATGTGT GCTGCAGGATGGTCGCATTAACTATGATGAGTTTGCGGCGATGATGAGAAAAGGAAATCCAGAAGCTCTTACTAAGAAGA GGCGTGATTCGTTTGTTTCACATTAG
CDS sequence (LotjaGi6g1v0178500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGACGTCAGGGCGACATATAGCATGGGGAAGGAGCTAGGGAGGGGGCAGTTTGGCGTGACTCACCTTTGCACCCA CAAGACCACTGGACACCAATTTGCATGCAAAACCATTGCCAAGAGGAAGCTGGTGAACAAGGAGGACATAGAGGATGTGA GAAGGGAGGTGCAAATCATGCACCATCTTACAGGTCAACCTAACATTGTGGAGTTGAAGGGTGCCTATGAGGATAAGCAA TCGGTGCATTTGGTGATGGAGCTTTGTGCTGGTGGTGAACTCTTTGATCGTATCATTGCTAAGGGACATTACACAGAACG CGCTGCGGCTTCTTTGTTGAGAACGATTGTGCAGATTGTTCATACGTTTCATTCCATGGGGGTTATTCATAGAGACCTTA AGCCTGAGAATTTCCTCTTGTTGAATAAGGATGAGAAGTCACCCCTCAAGGCCACTGATTTTGGTCTTTCAGTTTTTTAC AAGCAAGGGGACACATTCAAAGACATTGTTGGAAGTGCATATTACATTGCACCTGAGGTCTTGAAGAGGAGATATGGGCC AGAAGTTGACATATGGAGTGTTGGTGTCATGCTATACATTCTTCTATCTGGTGTCCCTCCATTTTGGGCAGAATCAGAAC ATGGTATATTCAATGCCATCTTAAAAGGCCACGTTGACTTCACAAGCGACCCATGGCCTTCAATTTCACCTGCAGCAAAA GATCTTGTAAGGAAAATGTTAAATTCAGATCCCAAACAGAGACTCACAGCACAAGAAGTTCTCAATCATCCTTGGATCAT GGAGGATGGAGAAGCACCAGATAAACCTCTTGACAATGCTGTGCTCAATAGGCTCAAACAGTTCAGAGCAATGAACCAAT TCAAGAAAGTTGCACTAAGGGTCATTGCTGGCTGTTTATCAGAAGAAGAAATCATGGGGTTGAAGGAAATGTTTAGAGGG ATGGACACTGACAACAGTGGAACCATTACAATTGAAGAGCTAAAGCAGGGGCTTGCAAAACAGGGGACCAAGCTAACAGA GCAAGAAGTTAAGCAGTTAATGGAAGCTGCTGATGCTGATGGCAATGGAACCATAGATTACGACGAGTTCATCACAGCAA CAATGCACATGAACAGAATGAACAGAGAAGAACATCTTTACACTGCCTTCCAATACTTTGATAAAGATAACAGCGGGTTC ATTACTACTGAAGAACTAGATCAAGCTCTCCATGAATATAACATGCATGATGGTAGGGACATCAAGGAAATCCTTCATGA AGTTGATGGAGATAATGATGGTCGCATTAACTATGATGAGTTTGCGGCGATGATGAGAAAAGGAAATCCAGAAGCTCTTA CTAAGAAGAGGCGTGATTCGTTTGTTTCACATTAG
Protein sequence (LotjaGi6g1v0178500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDVRATYSMGKELGRGQFGVTHLCTHKTTGHQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKQ SVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTFHSMGVIHRDLKPENFLLLNKDEKSPLKATDFGLSVFY KQGDTFKDIVGSAYYIAPEVLKRRYGPEVDIWSVGVMLYILLSGVPPFWAESEHGIFNAILKGHVDFTSDPWPSISPAAK DLVRKMLNSDPKQRLTAQEVLNHPWIMEDGEAPDKPLDNAVLNRLKQFRAMNQFKKVALRVIAGCLSEEEIMGLKEMFRG MDTDNSGTITIEELKQGLAKQGTKLTEQEVKQLMEAADADGNGTIDYDEFITATMHMNRMNREEHLYTAFQYFDKDNSGF ITTEELDQALHEYNMHDGRDIKEILHEVDGDNDGRINYDEFAAMMRKGNPEALTKKRRDSFVSH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 454 | 454 | 0.0 | – | |
| PANTHER | 1 | 454 | 454 | 0.0 | – | |
| Phobius | 1 | 190 | 190 | - | – | |
| SUPERFAMILY | 5 | 294 | 290 | 3.64E-85 | ||
| Pfam | 8 | 266 | 259 | 2.7E-75 | ||
| SMART | 8 | 266 | 259 | 2.0E-97 | ||
| ProSiteProfiles | 8 | 266 | 259 | 48.499 | ||
| CDD | 8 | 265 | 258 | 3.89857E-137 | – | |
| Gene3D | 8 | 91 | 84 | 1.8E-166 | – | |
| ProSitePatterns | 14 | 41 | 28 | - | ||
| Gene3D | 92 | 270 | 179 | 1.8E-166 | – | |
| ProSitePatterns | 128 | 140 | 13 | - | ||
| Phobius | 191 | 209 | 19 | - | – | |
| Phobius | 210 | 464 | 255 | - | – | |
| Gene3D | 271 | 444 | 174 | 1.8E-166 | – | |
| SUPERFAMILY | 306 | 446 | 141 | 3.69E-46 | ||
| ProSiteProfiles | 309 | 344 | 36 | 14.29 | ||
| SMART | 313 | 341 | 29 | 2.8E-5 | ||
| Pfam | 314 | 374 | 61 | 5.9E-13 | ||
| ProSitePatterns | 322 | 334 | 13 | - | ||
| ProSiteProfiles | 345 | 380 | 36 | 12.979 | ||
| SMART | 349 | 377 | 29 | 1.9E-5 | ||
| ProSitePatterns | 358 | 370 | 13 | - | ||
| ProSiteProfiles | 381 | 416 | 36 | 14.067 | ||
| Pfam | 383 | 446 | 64 | 2.7E-12 | ||
| SMART | 385 | 413 | 29 | 0.081 | ||
| ProSitePatterns | 394 | 406 | 13 | - | ||
| ProSiteProfiles | 420 | 451 | 32 | 11.919 | ||
| SMART | 420 | 448 | 29 | 2.3E-5 | ||
| ProSitePatterns | 429 | 441 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0178500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…