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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0190000 |
| Transcript ID | LotjaGi6g1v0190000.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD40 repeat-containing protein; TAIR: AT1G73720.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q8W117|SMU1_ARATH Suppressor of mec-8 and unc-52 protein homolog 1; TrEMBL-Plants: tr|A0A151R5C7|A0A151R5C7_CAJCA WD40 repeat-containing protein SMU1; Found in the gene: LotjaGi6g1v0190000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:48546335..48556451) extracted from Lotus japonicus Gifu genome v1.2.
GTGAAACCCTTCCCTGAACAGTGAACACCAAAGCAAAGCAAAGTGTCCGAACCCTCCCGCTACTGTGTTGTTTCCAAAAT CTGAAGAGAGAATCCAAAGCCCCACACTCAGTGTAGTTCGCAATGTCTACGCTCGAAATCGAAGCTCGAGAGTGAGTACT TTTCTTCCCACATCAACCCTGTATCTTCCCACAATCTTCAATCGCTAACAATCGTTATTGTTTTCCTCTTTTCTTCGCAG CGTAATCAAAATCGTGCTTCAATTCTGCAAAGAAAACTCCTTACACCAAACGTTTCAGACACTGCAGAGCGAGTGCCAGG TTTCTCTCAACACTGTTGACAGCATTGAAACCTTCGTTGCGGATATCAATAGTGGAAGATGGGATGCCATTTTGCCTCAA GTTTCGCAGCTCAAGCTTCCCCGGAATAAATTGGAGGATTTGTATGAGCAGGTAATGTTGTATTCGTATGTATATGTATA TCGCATTCCGCTTCGTGTGATGCTTATGTTCATTGACATGGTTGCAGATTGTGTTGGAAATGATTGAGCTTCGAGAGCTG GATACCGCGCGTGCCATTTTGAGGCAGACGCAGGTGATGGGTGTCATGAAAAATGAGCAGCCGGAAAGATATTTGCGACT TGAGCATCTTTTAGTTAGGACTTATTTTGACCCAAATGAGGTTAGAATACTTTTTTGGACTTCTTTTTGTTTCTGCACTT TGCTTAAATTGTGTGACATTATTCTGCTATAGTTGCTTAAGATAAGTTTCTATATATTTGTTATTTGTAAGTGCAAAAAA TTTAAATTTACTTGTTTTGGAATTAAAAGTATTTTGCCTTCAAGATACATGACATAGATGTCTGTTGTGTTCATGCTACG GTGAGAATGGTTCGAGTATAATTGACACTTTGGTAAAGCATTGTAATTTTAAATATGGGGATGGTAATCAATGCATTGCA AATGGCGTCTTTGTGAAGGTTTATCTATAATTTTTTTTATGAGGTACTTCTTATGCTTCTGCTCTGGGTGGTTGTCAAGT TTTACAGCTAATTGGATAATTTCCCTTTTTTTTAAGAGACTGATTCTTTGTTACACTGAGTAGAACAAATATGGTTTAGA TAAGATTATAAGAATAAGTAGAATGCCAATCCCACAATTCTGCTCATCACACTTGTTTGTAGAAGTATATTGCCCATGTA TATGTTTCCTTTTAGTCACTTGTTTCTTTTAGTTTTGGTGGTGGTAGTTGTGTTGAGTTTGCGATGGTCCAAATTTAAGA GCATCATAGCCCATCTTCGATATGATACTGGGTTCAAAATCCTACCTTCATTTTTTGTTTTTGGACCCCTAACTGCCTTC ATTTCTGCCACCTACCTGCCACCCTGAATTTCTTCCTTCATTGAGGCCATCGTCTGATAGTCTCCTTCATTCTGACCACC CTAGGGCCTAAGCTGCTTTCATTGGAGCCATCAGTTCTACAAACTCCACATTCTAGATGACCAATTCTAGGTTTGGAGGC TGTCAAGATCACGCATCAACTAGAGGTGTGGACAAAATAGTCTGTACTCTGTATAAAGGATTTAACAATCCTCAGCTTAC GACCTAACTTTTGGGGTTGAGTTAGGCCTAGCTTAGTCCTAACTTTAGAAAGCTTCTCCATTCAAACATACGTTTATGAG ATTTAGACTTTCTTATTTTTTGAGGATTATATGCTCCTCATCCTTGCACACACACACATTTTTAGCTGCAATCACATGCC ACATTTATATAAGTATAGTGTATTTTAATATTTGTTATATTTTGTTTGGAAGGATTTTAATCTGTTTCAGTCATTTTTCT TAAATTTCTTTAATAAGTACTCTTAATAGAAATAATTGGCAGCTGGCATGCTAAACCAAGAATTTGGTTTGTATTCCTTG TCCGTTCTTGGAAACATGAATATTACCGAATGAGTTATGAAACCTTACTACTAGCCATAGAACTGGGACTAATACGTGTT GAACTTCTTGTGTTTGTTCCTCTGCATGGGGTTTATGACTTGTGTCTATGTGACAGGCTTACCAAGACTCAACAAAAGAG AAGCGACGTGCATTAATAGCCCAAGGTTTTTGTCTATTACTTTTTTTGTAGTTATTATGCCTAGTGTTGATGTTGATTTT ATGATTCTAGTGAGTATTTGTTTCTTGATTGGAAATGAAAAAAGTTTCTTCATTCATAATTAGAGATCCATTTTGTTATT TAAGTTTTATTTATTCTTTGTGTAAAAAAGCTGACATTTAGGCCCCGTTTGGAAAAACAGCTTAATTAAGCACTTATGGT CATAAGCGCTTATTCATAAGCTATTTTTAAAAATTTATTGAAATAAATTAAAAATAAGCTGTATATAAGCATAAGCTGTT TTTCATAAGCTATCCTGAGTAGCTTATGAAAATAAGCTGAAAATAGCTTATGACAGGTCATAAGCTGTTTGCATAAGCCC TCCCAAACACTGGCATAAGAGCTTATGCTGTCAGATAAGCTCAAATAAGCTCTTCCAAACTGGGCCTTAATAACCTACGA CTTATTCTAGATCTTCTAGGAATAAATCATGGAACATCAAGCAGGCTATAGTTTCTGATAGAGAATGTGGATTTTAGATT ACTATCTTACAGCATCCAATTTGTTTATGCTTGTGAGTTGTGAATGGTTTTTGATCGAGCTCAATGGTGTAGCATATGAT CTATGTAGCCGACCTCACTTAGTGGGATGAGGCTTTTGTTGTTGTTGTTGTGAATGGTTCACCTTAATTTTGGCTTTGAG CTCATATTGGAGTCAACTTGTGATTTCACTGTGTTCACTGATTTGTGGATGTGCTTGATTTGATGTTTGTTGGGGGTGTT GATATAGGTCTTATTTGAGGTGTAACTGCAGGTCTGGAGGGGGGGATGTAGTTGCTGTTTGTGGCACAACCATATTTGTT GTAGAGTTTTTCGATAATTTTGTTGGAAGTTCTCTTCTATAATTTGATACTGTCCCTACATTCAGAATCAGTTTGCCCAA GGAACACGCAGAGTCTTTTATTTATTATTATTTTTTAATGTTCTAGATATTTTTTCTGGATGTTCTCTTATATAATTTGA GATTATATCCACTTTCAAAATCACTTTGCCAAAGGAACTTGCTAAGTCATTCTTATGACATTTTACTCATTTTGGAGATC CTTTGTGGATGATTTTCACATTTAGGATTGTTTCTTTATGGGATCCAGTAGTTTTCAAAATTTCTTATTTCTTCAATAAG TGGAAGGTTGCCTTTCTTTATTTGCCCCACTGTGCATCAAATGCATCCTATATGCGATCTGTTTTCCACCCAACAATGTG CCAAGGAGATGACCTTGTTTAAATAATTTGTGTCTAGGAAGTAGGAACTTTGGTGATACCAAATATTTTTTTCTTTTGTA AGTGTAGTATCCTAACAAGATTATATTTATACAATACTGTAACTACCTAAAATAACTTATTAAAATTCAGGACTCTTACT CACACTGGTTTGGAGATAAGGTATACAAAAGCGATGGTAACCTGATCACAGGCATTTAATGAACATTGATTTGCACTAAA TCAAACTTGAGTCTCTAATTTCTGGTCACTAAATATGAAAAATTTAATATGCTTTACTTTTTTAACAAAACCATGACTGG AAACAGAATGACATTATTTATATACTAAATTACTAATATGATTCAAATTAATTAATTGAAAATCACATTTACCTAGTTCT AGAATACAAGTGAATGACCATAAGAAATACTAAAGTACATTAGAGTTAGACTTAACAATAACTGCCAATGGTACCTCTTA AGCGTGTGGATTTTTGTTCTCTTTTATTTTTGTATAAGTGTATGTTATTGTGCTGATCTTCGTGTTCAAACAAAAGAATG TCTGTGTTTGCATTTTCAGGTATTGCAGCTGAAGTGACTGTAGTGCCACCTTCCCGATTGATGGGTTTAATTGGTCAGGC TTTGAAGTGGCAGCAGCATCAAGGTGAGATGTTTTATCACTGTGATCATCTGCATATAGTGTCTTTGTTATTGTGTATTT TTGTACGAAAGTCATATAATTTTTTAATATTTTGGCTCATTTTTAATTTCTGCAACTTCTAGGTGCTCAGAATGTATTCA GTTTTTACATTTCAGTCATTGGGATGCATATTTCTTTCCTCTAATAATAAGCAGAGAAGAAACTTTTTTTTTCTATAGCA TGGCTAAATTTGTGATGCCTGGAAATGATAAAATGCTTGGTTGCCACCATGCTACTTAGAAGAGAATTTATATCTTGATG GTGCAATGCTTTCCCTTGGGATATTTCAGGGTTACTTCCTCCTGGTACGCAGTTTGATTTGTTTCGTGGAACGGCTGCTA TGAAACAAGACGTGGATGACATGTATCCAACAACTCTTTCTCACACTATAAAGGTATGCTTTCTAAATCCTTTTGAGGCA TTGCTTTAGTTACATTTTTAAGGATCAATTTAAAATACCTTAATATTTGAAAGAAGTGGTTTGGCTATAAATTGCTCGAG TGAAAAAAAAAGCTGAAATTTATATACATTGAGATGATAAATTCTGCATGAATTTTGCAAAAAGAGTAAATATCCTGAAT CTATTCTATTTCTACTCAATGAATCTATTCTACTTCGAAAGTGGAATAGTATTTAAGAAATTTAACTTTTGACGACAATT TTTGCAAGAAGAAATATTCAAATGGTCATTTCCTGCTGTGTCATTGATCGTCAGTCAGACAATCAAATTAATTTGACCTC CTCCTATTTATGTTGCCTATAGAGGTTGTTTTATCCTCTCCTTTCGTATCAAAGACTATCCTTTTATATAAGATCTGTTA TTAATCACTGGGTACCCTTCTAATCATGTTGAAAGATACACAACATGAGTACCTTACTCTTTTCTGGTGTCTGCCTGTGT GCTTGTAGTTTGGGACAAAAAGTCATGCAGAATGTGCTTGCTTTTCACCAGATGGGCAGTTTCTCGTATCCTGTTCAGTT GATGGATTTGTTGAGGTATACATAGTTTGATTTGAGACTTTGATTATAAGCAGCTTTCTTCCTGATTTGTGGACATACTT TTCAAGGTTTGGGATTACATAAGTGGAAAGCTGAAGAAAGATCTCCAGTACCAGGCAGATGTGAGTTAGTTTTTATTTGA ACTTCTTTATGTGCCAAGAATAGATGTCTTGCATGTAACGGTGAACGAATTTGGGGTATAGCTATTTTGCTGACATCATT CCTGTAAAATTTTGTTAAGCTTTTCAGTTTCTGAACACTTCTTTGCCCTGTCACCTTTGCATTTATAGATGCACTCAAAG CTGTAGAATTGATACTGTTGATTTCTGTTGTCCAATTGGGAGTTATTTCAACTTTGGTCACAAAATGTACTTTTTTGCTT GAACATTAAGTATGCTGGTAGTTCATATGTAATATATCAAATATTTACACAGATTACACGATTTACTTGAAAGATAGTCT TTTCTTTCATGAATCATGATGAGAAGTCATGTTTTGGTGATCTCTCTTCTTTCTGGTGTTAGTATGTGTATGAACACATC TGCTTAACTTTTTGTTGTATCTTAAAACTATCAATATGAACATGGTTACCTCTGGGAGCTAGCTAGTTGTACACTAAGAT AATTTATCTCTGTCCCTTATGAAAGGAAAGTTAAATTTACCATAAGTCTAGTCTTTTTTTTGCCTTGGAGATTTTCTGAT TCTAAGAACTTGCAGGAGGTATTTATGATGCATGATGATGCTGTACTTTGTGTGGACTTTAGCAGAGATTCAGAGATGCT GGCATCTGGATCACAAGATGGAAAAATTAAAGTGAGTATTACATCTGGATCACATTGCAATGCAATCTTAACCTTACGCT AGCAAGCCTGCATAGGCTATACTTCTAAATTCTAGGTTAGAGTCGTGGTCTATAGTATAAATAGGCCCATGTACACAGAA TTCATCATGAACGATAACAGGGTTCCATTTTTCAGACTCCACCCCCAACCCTCTCCTCTTATGATTAAAAAAATTAAAAA CAAAAGTATAAATTGGGTGAATATTCAGGTGTATCATTACATGGTAATCAGTTATTATTATATTGTTGTTGCTTACTTGA TTTATTTGATTCAGCTGACATGAAGCTTGTGCTCTATTCTTATGGAAAAACTTTAGGTGTCATTCCAGTGAAGTCTTCTC TAAATTGTCTAGAAAAAGAATTGTTTGGTATTGCATTTTAAATTGACATGGACATTAGGCTTTTACTCGAGTGAAAATGG TTTCTACATGGCTTCGAGCTCATTATTTTATTGATTTTTTAATGCTTCTCTTCTGGTAAATTGTGTGTAAAATTTCTCAA ACTTGATGGTTTGGAAAGCAAGTTTTCAAATGCCCCATCCCAGTATACAATATTGTAATGCTTGTGGTTGTTTTGCATTA GTTGATAAATTGATAAAATATGGTTGACTAATCTATGAAAAATTAAAATAACAATAGCACTAATAAGTACAGAGACTATA TTCATTACAGCAATGTTAATTGTACCTAAAGCAGAATTAACACTGTTATTTGTGTTCAATACTATATCTGGTCCTACTTT GTCATATCAAATTGTATCTTGTGGTAAGTTGTTCCTTGAATATTGAATATTTGCTGGCTGCAGGTCTTGATAGTGTTGCG ATTGTTATTGTAAAAAGTGTTTATGTTTTCACCTTAATTGTTGATGTGAAACTTTAAACTGTATTATTCACATTTCATTT TAGGTATGGCGTATTAGGACTGGTCAATGCTTGCGGCGTCTTGAACGTGCACATTCCCAAGGTGTTACAAGTCTTTCCTT TTCTCGTGATGGGAGCCAGTTATTAAGTACTTCATTTGACAGCACAGCAAGGTTTTGTTTATTTATTTTTACTTATTTTG TGTCTTTGATATAAAAAATAATTTCCAGGGTCTTATTTTTCACCTTACACTTCCAACTTCTTAAAAGTTTTTGTAATATG TCATCTTTCTGTTTTTGGGCTTATGACGTGGACTTGAAGTTTCCTCCATAGCTGGGAGGTTTTTGCTTTTATTACTTCTG TTATTACTTTTCAATTCACCTAAAAATACAATTTCCCTCTGCCTGATAGGGTTTATTTCTGTAAGAAAACCATAATATAA TCCAAGTCAAATTCAAAACATAGCATCACAAGTTCATAAGCCTCATAACATAACATAATGAGCTTTAGATAGTAGTTTAA CTAGGGATTCTACTGGAACTGCAAGTGAAGTTACACACTTCTGTGAGATTCTTTATATAGAGCTCATCTCCTTGTTCTAA TCTTAATGCATTGGCTTTGCAGTATATTACCCTTATTAATTGTTTAGCAACTTCTGAATGTGACGGTGCTTCTGTGTAAT ATAGAATCCATGGCCTTAAGTCCGGAAAGATGTTGAAAGAGTTTCGCGGCCATACCTCTTACGTGAATGATGCAACTTTC ACCAACGATGGGAGCCGTGTTATTACGGCATCAAGTGATTGTACAGTCAAGGTGAGTTGGTTGGCAATATACATGAAGCA AGTGCTTTGGTTTGTTGCTAATAAGAAATGTATTATTTCCTCCTTACTGTAGGTCTGGGATGTGAAGACTACAGACTGCA TACAAACTTTTAAGCCACCTCCTCCTTTAAGGGTGTGTCTTTAAACAACTACTGTTGTGGGTTTTTTTCCATTCAGTTTC GCGATATCATCTCCCCTGCAAATTAATTTATTTTGCTTACTTTCTTGTTTCTTTGGACTGTTAGGGAGGTGATGCTTCTG TTAACTCTGTGTACATTTTCCCCAAGAATGCTGATCACATTGTTGTTTGTAACAAAACGTCATCAATATATATCATGACA CTTCAAGGCCAGGTATACATTCAAGTGTGGGTGACTGGAAGTCATTTTGTTTATGCGTAGTTCCACTTCCACCATGTCTC AATATTAGTGTTAAGGCTGTTGTGCCATTGTTCGTCTTAATGATTTATGTATATTTTGACTTTTGACAAGGAAAAATATA TTCTGTGCATTCATGTTGGTAAAATGTTAACATTTACTTTGAGACACACAGATTGGATTAGAGAACTTCATGTCTTACTT TGTTTTCATTTATTTTGATAATGAACGTTTTTTCTTAGGATATATAACCTATATGTTTCTGCATTTTGAGGATAAGTGAA TGTATAACTTCTGTCTGAGGTGTATCTGCAATTATCATCACTATTCCGAGCATGGTTTTCTCTGTTAATTGGTGTAGGTT GTCAAGAGTTTCTCATCTGGTAAAAGAGAGGGTGGAGACTTCGTTGCAGCCTGTATTTCACCTAAAGGGGAATGGATTTA CTGTGTTGGTGAAGACAGGTATGAAATTGTCCCTTCATGCAATCTGGTAGATAAAGATGTTGATAGTTGAAACTACCTTA TCAGAGACTTTATAAAACAACAATAACCAAGCCTTGGCAAATAGGTGGAGTTTACTCAATCATGCCTATTGACAGGCCAT TTAAATCCAAATCCTTGTTAATGGTTACCTGTAGTTTGCTTTGGTCTGCCTCTATCTCTACTTGTTGGATATGAATTATT CTCCATTTGAGATCTTTTACACATGTTCAAATCCCTTGAGAATGAATCATCTTTATCACAATAGTTGCTACACCACTGCT CTCTTTAATATGTTCATTCCTAATTCTACGTATTCATCATAAAATCTTCCTTATGAGTTCTATGGCTGGTATCTTCCTTC ATTCCCTTGTGAATCTCTATGATGGACCCATAAGACTTGATTTTTCTCCAATTTTCCCTTCTAAAATAAAATTAGTAGGA CTCTTACTAAACTTATGTTAAACATACGAGCATAGCCTAATTATGCAGCAATTTCTGAGTTCCATGGGGTTTTCCAGATC AGCATTTTTTTAAAAATGATCGTTCTAAATCTTCCAGATAATTGTCATATTCTTTGTTCTTAATGGGATCTACAAATTAA ATGCAGGAATATGTACTGCTTCAGCTATCAGTCTGGCAAATTGGAGCATCTGATGAAGGTATGTTTTTTGAGTTGGCCCG AGTCTAAACGTCCCTCAAATTGGTCTTACTGTCCACAAACATTGTCATACTGTTTTCATATATGTAATTTTATTTGATCC AAATTAGTGTACCTTTCTTTAATGCTTATATCTGCCGCCTTTATCTTTGAGTTGAATTAAAGGGGGGATTCCATTAACGT TTGTAAATACTGAACTTAAAGTGGAATAACATGCCTCTCATGGTGTAATTTTATCCATTCAAGCTCATTAACTGCCTTTT CGGTTGATATGTCATGCATTCTGTGTTCATTAACCTTTGTTTACTATGGTTCAATGGCCATGTATTAACTTGGTGTTCTG GATTTCATTTTCTTGTATGCTATGGTATCTTCCACCTCTACAAAGGATGTTGTTATCTTCTTGATATATAACTAACTATG GATTTAACAACAATCTCTCTGTTTAATGGCAGGTCCATGAGAAGGAAATTATTGGTGTCACTCATCATCCTCATAGGAAT CTTGTTGCAACTTATAGTGAAGACGGCACAATGAAATTGTGGAAACCTTGATTCTGTATTTCTATCAACTAGTTTGTGCA TTTAGAAAACCTTAGATTCATGTTCTGATGTTCATCTCCTTGAGAAGCTCCTTTCTCTAAGTAATGATTGGAGTAAGCAA TATCCAATGCGCAAAGAATATGTTTATTGACTAGGGAGCCCATTTACCATGTTGTAGCAAATAGGAGTAATTTATGCGAT TGTTTCTATATGGCCTGAAAATCACTTCAAACGTTACCCTGAATTGCTCCTTTTTATTCTTGATTCTCTTTCAAGTAGAC TTAGAATCTATAAATTTAGTTTTCATTGCTTTGATTTGTTGCAAATATTAGTTTTATATTTATAGTTTTTGTTATGCTCA TTTTTGTTTGGGAAAAAAAGAGTTATGCTCATTAAAGTCACTGGTGAGCATGTTGAATTTAATATAATTACTCATTTAAA GAGAAATGATGACAAAAACATGGCACTTTGAGTTAAT
CDS sequence (LotjaGi6g1v0190000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTACGCTCGAAATCGAAGCTCGAGACGTAATCAAAATCGTGCTTCAATTCTGCAAAGAAAACTCCTTACACCAAAC GTTTCAGACACTGCAGAGCGAGTGCCAGGTTTCTCTCAACACTGTTGACAGCATTGAAACCTTCGTTGCGGATATCAATA GTGGAAGATGGGATGCCATTTTGCCTCAAGTTTCGCAGCTCAAGCTTCCCCGGAATAAATTGGAGGATTTGTATGAGCAG ATTGTGTTGGAAATGATTGAGCTTCGAGAGCTGGATACCGCGCGTGCCATTTTGAGGCAGACGCAGGTGATGGGTGTCAT GAAAAATGAGCAGCCGGAAAGATATTTGCGACTTGAGCATCTTTTAGTTAGGACTTATTTTGACCCAAATGAGGCTTACC AAGACTCAACAAAAGAGAAGCGACGTGCATTAATAGCCCAAGGTATTGCAGCTGAAGTGACTGTAGTGCCACCTTCCCGA TTGATGGGTTTAATTGGTCAGGCTTTGAAGTGGCAGCAGCATCAAGGGTTACTTCCTCCTGGTACGCAGTTTGATTTGTT TCGTGGAACGGCTGCTATGAAACAAGACGTGGATGACATGTATCCAACAACTCTTTCTCACACTATAAAGTTTGGGACAA AAAGTCATGCAGAATGTGCTTGCTTTTCACCAGATGGGCAGTTTCTCGTATCCTGTTCAGTTGATGGATTTGTTGAGGTT TGGGATTACATAAGTGGAAAGCTGAAGAAAGATCTCCAGTACCAGGCAGATGAGGTATTTATGATGCATGATGATGCTGT ACTTTGTGTGGACTTTAGCAGAGATTCAGAGATGCTGGCATCTGGATCACAAGATGGAAAAATTAAAGTATGGCGTATTA GGACTGGTCAATGCTTGCGGCGTCTTGAACGTGCACATTCCCAAGGTGTTACAAGTCTTTCCTTTTCTCGTGATGGGAGC CAGTTATTAAGTACTTCATTTGACAGCACAGCAAGAATCCATGGCCTTAAGTCCGGAAAGATGTTGAAAGAGTTTCGCGG CCATACCTCTTACGTGAATGATGCAACTTTCACCAACGATGGGAGCCGTGTTATTACGGCATCAAGTGATTGTACAGTCA AGGTCTGGGATGTGAAGACTACAGACTGCATACAAACTTTTAAGCCACCTCCTCCTTTAAGGGGAGGTGATGCTTCTGTT AACTCTGTGTACATTTTCCCCAAGAATGCTGATCACATTGTTGTTTGTAACAAAACGTCATCAATATATATCATGACACT TCAAGGCCAGGTTGTCAAGAGTTTCTCATCTGGTAAAAGAGAGGGTGGAGACTTCGTTGCAGCCTGTATTTCACCTAAAG GGGAATGGATTTACTGTGTTGGTGAAGACAGGAATATGTACTGCTTCAGCTATCAGTCTGGCAAATTGGAGCATCTGATG AAGGTCCATGAGAAGGAAATTATTGGTGTCACTCATCATCCTCATAGGAATCTTGTTGCAACTTATAGTGAAGACGGCAC AATGAAATTGTGGAAACCTTGA
Protein sequence (LotjaGi6g1v0190000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSIETFVADINSGRWDAILPQVSQLKLPRNKLEDLYEQ IVLEMIELRELDTARAILRQTQVMGVMKNEQPERYLRLEHLLVRTYFDPNEAYQDSTKEKRRALIAQGIAAEVTVVPPSR LMGLIGQALKWQQHQGLLPPGTQFDLFRGTAAMKQDVDDMYPTTLSHTIKFGTKSHAECACFSPDGQFLVSCSVDGFVEV WDYISGKLKKDLQYQADEVFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRRLERAHSQGVTSLSFSRDGS QLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDGSRVITASSDCTVKVWDVKTTDCIQTFKPPPPLRGGDASV NSVYIFPKNADHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACISPKGEWIYCVGEDRNMYCFSYQSGKLEHLM KVHEKEIIGVTHHPHRNLVATYSEDGTMKLWKP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 513 | 511 | 1.1E-248 | – | |
| PANTHER | 3 | 513 | 511 | 1.1E-248 | – | |
| SMART | 7 | 39 | 33 | 2.3E-5 | ||
| ProSiteProfiles | 7 | 39 | 33 | 10.276 | ||
| Pfam | 8 | 37 | 30 | 8.2E-16 | – | |
| ProSiteProfiles | 41 | 93 | 53 | 9.751 | ||
| SMART | 41 | 93 | 53 | 1.7E-4 | ||
| Coils | 71 | 91 | 21 | - | – | |
| Gene3D | 198 | 513 | 316 | 1.3E-76 | ||
| SMART | 202 | 242 | 41 | 1.0E-6 | ||
| SUPERFAMILY | 207 | 512 | 306 | 4.71E-74 | ||
| ProSiteProfiles | 210 | 513 | 304 | 44.109 | ||
| Pfam | 215 | 242 | 28 | 1.3E-5 | ||
| CDD | 219 | 512 | 294 | 1.89576E-64 | – | |
| ProSiteProfiles | 222 | 251 | 30 | 10.642 | ||
| SMART | 253 | 292 | 40 | 2.3E-8 | ||
| ProSiteProfiles | 260 | 301 | 42 | 16.223 | ||
| Pfam | 263 | 291 | 29 | 3.5E-6 | ||
| PRINTS | 279 | 293 | 15 | 2.0E-6 | ||
| SMART | 295 | 335 | 41 | 1.2E-6 | ||
| Pfam | 296 | 333 | 38 | 4.4E-4 | ||
| ProSiteProfiles | 303 | 344 | 42 | 10.542 | ||
| SMART | 338 | 377 | 40 | 1.7E-10 | ||
| Pfam | 340 | 377 | 38 | 1.0E-6 | ||
| ProSiteProfiles | 345 | 386 | 42 | 16.557 | ||
| ProSitePatterns | 364 | 378 | 15 | - | ||
| PRINTS | 364 | 378 | 15 | 2.0E-6 | ||
| SMART | 380 | 426 | 47 | 18.0 | ||
| SMART | 428 | 470 | 43 | 8.0 | ||
| SMART | 473 | 512 | 40 | 7.6E-4 | ||
| Pfam | 477 | 512 | 36 | 0.18 | ||
| ProSiteProfiles | 480 | 513 | 34 | 11.678 | ||
| PRINTS | 499 | 513 | 15 | 2.0E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0190000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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