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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0201000 |
| Transcript ID | LotjaGi6g1v0201000.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A151TGL3|A0A151TGL3_CAJCA TMV resistance protein N; Found in the gene: LotjaGi6g1v0201000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:49801962..49808486) extracted from Lotus japonicus Gifu genome v1.2.
TAGGAATGAATCTGAATTCATCAAGGACATTCTTAAAGATGTTATCAAAAAGCTGGAAATTAGATCCCCAATTGAATTGA AGGGAGTTGTTGGAATAGAGGAAAATTATGCAAAGGTTGAGTCATTATTGGAAATTGGCTCAACAGAAGTTCGAGTGATT GGAATATGGGGCATGGGTGGCGTAGGTAAGACCACCCTGGCTTGTGCTTTGCATGCCAAGTTGTTTTCTCAATTTGAAGG TCATTGTTTTCTCAAAAATGTGAGGGAACAATCAGAAAAGAATGGTTTAGATGCCTTGCGCAATAGACTTTTTTCTGACT TGTTAGGAGAAGAAAATCTTTGTGTTGAGCCCCATTTTGTGACGAGGAAGCTCAGACGTAAAAAAGTTTTTATTGTTTTG GATGATGTGGCTACCTCAGAACAGTTAGATGATCTCATCAGTGATTATGATTGTTTGGCACAGGGAAGTAGAGTGATTGT AACAACTAGAGACAAACACATATTCAGCCTTGTGAATGATATATATGAGGTTAAGGAACTGAGTTACCATGCCTCTCTTC AACTTTTCTGCTTGACTGCCTTCAGAGAAAAGCGTCCCAAAAATGGATTTGAAGAACTATCAAAAAGTGTGATCGCATAT TGCAAAGGCAACCCTTTGGCTTTAAAAGTCTTAGGTCCACGACTTCGATCAAGAAATATTGAAGTATGGAAAAGTGAATT AAGAAAGCTCCAAAAGATTCAAGATGTGAAAATTCATAATGTGTTAAAAATGAGTTTTTATGGCTTGGATTCTGACGAGA AGGACATATTTCTAGACATTGCATGTTTCTTAAAAGGAGAACCTAGAGAACATATAACAAGTCTACTAGATGCTTGTGGT TTCTTTGCTGCTGTTGGGATAGAAGAACTGATAGATAAGTCTCTTATAACTATTTCATATTTTAATAGAATAGAAATGCA TGACTTGATACAAGAAATGGGCCGAAATGTTGTTTGCCAAGAATCTCATAAAGACCCTGGAAGAAGAAGTCGATTGTGGG ATCCTGAGGAAGTGTATGATGTATTGAAAAATAACAAGGTTGGTGCGAGTTAAAATTACTTTTCGTCGAATAAAATTGCA TCTATGTTTGTAGAATGTAGCTATTATGATAGCATTTACTAATTGCTATTCTATTTTGTTTTGTTAGGGAACTGAAGTAG TCGAATGCATAATTTTAGATGTGTCTAAAGTTAAGGATCTACATTTGAGCTTTAATTCTTTTACAAAAATGACTGAAATG AGATTTCTTAAATTCTATTCTTCTATACCGAGTGAAGGATGTAAGATATACCTCCCCAACGGTCTTGAGTCATTGTCTAA AAAATTGAGGCGCCTTGAATGGCCTGGGTACTGTTTGGAGTCTTTACCATCAACCTTTTGTGCTGAAATGCTTGTTAAGC TTGTCATGCCAGACAGCAACATTCAAAAGCTTTGGGATGGAGTTCAGGTATATATGAACATGTATATTTTACTTTTTGTT TTAATTTTATAGACAATATATAGGAGTCATTAGATTTCCATATATGTGCTTAGATTTCTTCTTTTTGTTCGAAGCTTAGG AAGTGACATGTCTACCTTGTTACTGCAGAATGTTGTGAATTTAAAGACAATTGATCTTCAATGCTCTAGACACCTGGTTG AGCTCCCAGACTTATCTATGGCCACAAATCTTGAAGTATTATCTCTTGATCAGTGTATAAGTTTGCGTGATGTTCATCCA TCCATTTTTTCACTCCACAAGCTTTGGCATCTGGGTTTACAATACTGCACAGAGATTGAAAGCCTTGAAAGTAATGTCCA TTTAAAATCTATCCGCAGTTTCAATCTCACGAACTGCTCATCCCTGAAGAAATTCTCAATCTTCTCAGAGAAATTGGAGA CAGTGTGGTTAGAACGCACAAGTATCCAGAAATTACCCTCATCAATTTGGCATTGTAAGGAACTTCATCATATGACTCTA AGGGACTGCTACAATCTTGAGAGTTTTGGGATTGGGAACAAGTCATCTCATGATCCGGTAAACGCATCTCTTCGCCATCT AGACCTTTCTGGATGCAAATTACTAAATGAATTCCATTTATGTTTAATCCTTGATGGTATGCAGTCTTTAAATGAGTTGA ATTTGGGAAATTGTTGCAACTTACGAGCACTCCCTGACACCATTGGCTCGTCAACAAGATTAGAGCGCTTGTACCTAAGT GGAAGCAATGTTGAGATGTTGTCTCCAAATATCAAGATCCTTTTGAATCTACGAGAGCTTCGGTTAGACGATTGTAGGAA ACTTGTGTCTCTTCCAGAGCTTCCACCTTCCCTACACATGTTAAGTGCTATTAACTGCACATCTTTGCACACAGACATCA CTCATTTGGTAACAGTGGTACAACACAACATACCTGTCAGATTTTATGAAGGACCTTCAGGACGTCCTCAATATGTTGTA ATCCCTGGAGACCAAGTTCCGGACATGTTTATCTTTTGTGCTGAAGGGGATTCAATAACGTTTCCGCAACTTCCACAATC TGGCCTGTGCGGCTTTATTTGTTGCCTCGTTCTTTCTCATCTACCTTCAGGGAGCTACCATGGAGATGTCAAGTGTTGTA TCAACAAACGTTCCACCTTTGATATAGCTAGAATGTTGTTGTGGGGTACTAATTCCAATTCAGATCATGTGCTTCTTTGC TTTTTGGGAATCAATGGTGAAGATGATTGTTTTGAAAGTGGAACGTGTGATCTTAACAGCATATCATTTGAATTCCAGCT TCTAGATAAGAGTGATGGATTACTCTCCGTGAAAGACATAATAAAGAGGTGCGCGGTCTTAACAGCATGTCATTATGCCT CTCGAGAAAAGACTATTGAGTTTCAACCCAAATCGTTTACATTTGCAGATTTGGCATCACTTTAGAAGGTAAAGTGCTTT ATCAAACAACCATTAATGGAAAAGTTTGAATTAAACTTGTATCCATGATTTCACGAATTTTGCTGTTGTGCAAGAGCTGA CTGCGATGACTCAATTGCAGGATCGGTGGACTCCTCCTTCAGTGGGGTGGGTGAAGCTGAACACCGACGGAAGCTTCACT AGGGGTTCGTCCCTCATGGGCTGTGGAGGTCTTTGTTAGAAATAATGATATGAACTATTCATGTAGCCCTGACATAACAG CTTTAGCTTTTGAGATAATTGGTTGTTTGACAGTCTTCTCCAGGATCGTCATGGGAATTGGCGGGCTGGTTTCTCAAGTT TTGAAGGAGTGGGAGAAGTGTTTTTGGTTGAGTTGCTTGGAGTTGTTTGAGGCTTATCCTTGTCTCGGAGGACTGGTGGG CGTAAGCTTGTTTGTGTGAGATAGATAGCCTTGATGTAGTTAACTGCCTGAATGGTTGAGGTCCGGTTAACCTTCATTCA TGTGCTGCGTTTATAGCAGAAGTTTGTTATTTGGTTCACCCTAAACTTTGTATATTTTGTAAATAGACACGTTGAATTTT CATTTTATCTCAATAAATACTTAAACTTCTACTAGTAAATGATGCAGATAAGCTATAATGAGAAATTGCATATGCATTTC TCTTCCTTAGTAAACATAAACATGAGAAAGTGAGGGCACTCAAATATTTGCTCACTCTCAATATAAAATGGGGGTCAAAA GCACACTATCTATATTCATTTTGCACTACAAAAACCTCTTCAATTCAGCAAAACATGAAATCAAATTTAAACCTGAAAGC ATTTCAAATTGCCATCACCCTAGTGCCTAATGTACAACATGTTGTCATGGAAATGTATACATTTTTCATCAACTATATTC AAATTAGAAGCTGTAATTCTATACCCCAAAGCAATCTTCTGTGCAGACTAAGTCATATGATGCAGTGAGTTCATTAGTCA ACTGAGATGGTCATTCTTCAATTACTTGATCACAGCCAAAAGTGCAACATTGCCTGTTCATAGAAATTTAGTCTGGTCAA TTCCTATTTTAAAGGTCAGAAATCGCACAAATAGTTCTCACCAAATCTCTTCCTTTCCCATCACACACACATTAACATTA GTGAACATATTAATGTCAAAACCATGAGTGTGAAACAATAATTTCCATCTTTTTTTATTATCAAAAGAGTAAGAGACAAA CACCAGATTACACTGTACCTCTTGGAGTTGGAGAAGGCTCAAAGACACATCATCATCCTTAGGAGTGGCTTCTTTGGCTT TCCAGCTTCTGGCTTCTTTGGTTTTCCAGCTTCTCATCTCAGACTGTATTAACTTGAGTTGATTTTGCACATCCTTCAAT AGGCTCAATTGCTCTTCACCATTCCCTTCATGGATAATCTCATGCCTTGGACTAATTCTCTCCCTCTCAAGCCTCTCAAT TCTCTGATGCAGCTTTTGAAACTCAGATTGAGCATTGCACTCCACACCTGTTATTTCTTTTTTTAGGCCATTGATAGTCA CCATATCTATAATGCTAGGTGCTTTGATTTCGCGGTGTACTCTAACCACGCCCTTTTGCTTGTCTGCATCATGTTTAAGA GATGACTCAACCATTCCCTCAGACACTGGATCTGGTTTTGTTAGCCTGTTCTCTGCTTCAGATTTCCATTTCTCAAGCCT TTTCTTCAAACGTTCACTGATTTCATTTTCATGCTTTTCACTAGCTTGTGGGACTTCAAACACATCATGAACATTCGGCA AGCAAGGAGGGTTAGCATCTTCTTTTCTATCTGAATTAGCAGAATGAAACCTGTCTTGTTGGTCACTTATAATCCTGTTA GCCAGTGACAAAAATGAACTCGACCTCCCCCTTCTACTACTCAAGTCTGAACTATTTTCTTCTCCTTCAGTAAAATCTGA AATCACCTTCACTTGTTCATCTAACCTCTTTATCTGGTTCCAATATGAATCAAGGTTTCCACTTCCAAATGCAAAGTCTC CTAACTTTCTTCTCAAATCCAAGTTAGGTGCAGTAACTTCCTGATCAGTGCTCTCCAAAATTACCTCAGGAATCACATCA GAAACTGGACTAGGTGATCTCTCACTCTTCAGAGCAAGTTTGAGGGAACTCTTAAACTGAATAGGAGGCATTGAATGCAT CCTTCTCACATTGCTAGATTGACCCTTTTCTCCATTCAATTGATCATTTCCATTCAAGATCAGATCCTCCGGGAACTCGA ACTCACTTACACTGAAATCACACCCCAAGCTAAGAAGCTTCTGCTTATAAGCCTGCACTTGAAACTCCAGAGATGCAATT TCCATCTCCTTCTGACACACAACCTCTTCAAGGGCCACGATGGTTTCCTCCGAGTGGCACATTTTCTCCTCAGCCATTCT CTTGTAGTGACACGCCTCCATCACCACCGCAGCCTTCTCTCCTTGCAACCGCAGAATCATGTCAAGCGCTTCACTCGTTG CAGTGGCTGAGGCTTCCCTTTCCTCATCCAACTCAGCATAGAGCTTCTGCAGAAGCTGCTGCTGCACACGAAGCGTCTCC TTCATTGCTGACACATCACTTTTAGCTCGAGCAATCACAGAACCCGAGACGGTTTCTGCCATGCCAGGGTTTTAAATTGC GGTCACGATTTACTTAGAATTGCAGACAAATGCAAGTTGACGCAGCCCCAATTGCTGTCACGATGCCAATGTGAGGACTC CAAAACCCGTTATGTTGCGGCCGCAATTGCAGTTATCCTCAATAAATTCTTAAGTTTAACCAATCAATCACAGATCACAG ATCCCTGAACACACAAAACAGAACCTCTACATCACAATCAGCCTTCAAGATGCAATCTCCAAAGGTTGTTTGGAAGAAAC AAAGAGATTGTATTTTGAGATAAAATACTAAACAAACATGTAGTATTGAATAAAGCATGTGATGTGAGAAGAGTCAATAA ATAAAATTCACAATACAAAGCTAGCTTTAAAAATCTACTAGTCCATGACTCCATGTGCTGTGTACAGAGAATAACAGAAC AATGGCAATTTTTTTGGAGATGAAAAAAAAAATGCAAACTTGCGACATGCCCACAAATCAACTAGTAAAAAGGAAGAAGA TGATCCATCTGGGGATCACAAGCAAACAGAAAAATGAAACTTGATGAAGAATAAACCCATAACAGAAAACAAAACCTCAA ATCAGAAATCTGCTTGCAACAGAGAAATGATATTGACTATATAAGATGAGGAAACATTCATAGATGAATAATAATATACC TTCCTTCTCAAAAGAGCTCACAGAAATTTCGCCAATGGTTCACTCTGTGATGATGCATGTACAAGAATTCAATGCATTTT CAAGGCTTAAGGACTAAGGGTAATAATTGAGAAAATGAAGTTTTTTTTTTTTGTGGTTGGTGTTGGTTTTTGTATATACA CGAACAACAGCACTATGTGAGTTCAGTTACACGCATGAGAAAGAGAACAGAGTGTGTGGCTTCGGTTTCTGGTTACAGAC AAAAACACGGTTCGTTAAGGTTTCTCTGCGTTTGCTCTTAATAAT
CDS sequence (LotjaGi6g1v0201000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGGCGTAGGTAAGACCACCCTGGCTTGTGCTTTGCATGCCAAGTTGTTTTCTCAATTTGAAGGTCATTGTTTTCT CAAAAATGTGAGGGAACAATCAGAAAAGAATGGTTTAGATGCCTTGCGCAATAGACTTTTTTCTGACTTGTTAGGAGAAG AAAATCTTTGTGTTGAGCCCCATTTTGTGACGAGGAAGCTCAGACGTAAAAAAGTTTTTATTGTTTTGGATGATGTGGCT ACCTCAGAACAGTTAGATGATCTCATCAGTGATTATGATTGTTTGGCACAGGGAAGTAGAGTGATTGTAACAACTAGAGA CAAACACATATTCAGCCTTGTGAATGATATATATGAGGTTAAGGAACTGAGTTACCATGCCTCTCTTCAACTTTTCTGCT TGACTGCCTTCAGAGAAAAGCGTCCCAAAAATGGATTTGAAGAACTATCAAAAAGTGTGATCGCATATTGCAAAGGCAAC CCTTTGGCTTTAAAAGTCTTAGGTCCACGACTTCGATCAAGAAATATTGAAGTATGGAAAAGTGAATTAAGAAAGCTCCA AAAGATTCAAGATGTGAAAATTCATAATGTGTTAAAAATGAGTTTTTATGGCTTGGATTCTGACGAGAAGGACATATTTC TAGACATTGCATGTTTCTTAAAAGGAGAACCTAGAGAACATATAACAAGTCTACTAGATGCTTGTGGTTTCTTTGCTGCT GTTGGGATAGAAGAACTGATAGATAAGTCTCTTATAACTATTTCATATTTTAATAGAATAGAAATGCATGACTTGATACA AGAAATGGGCCGAAATGTTGTTTGCCAAGAATCTCATAAAGACCCTGGAAGAAGAAGTCGATTGTGGGATCCTGAGGAAG TGTATGATGTATTGAAAAATAACAAGGGAACTGAAGTAGTCGAATGCATAATTTTAGATGTGTCTAAAGTTAAGGATCTA CATTTGAGCTTTAATTCTTTTACAAAAATGACTGAAATGAGATTTCTTAAATTCTATTCTTCTATACCGAGTGAAGGATG TAAGATATACCTCCCCAACGGTCTTGAGTCATTGTCTAAAAAATTGAGGCGCCTTGAATGGCCTGGGTACTGTTTGGAGT CTTTACCATCAACCTTTTGTGCTGAAATGCTTGTTAAGCTTGTCATGCCAGACAGCAACATTCAAAAGCTTTGGGATGGA GTTCAGAATGTTGTGAATTTAAAGACAATTGATCTTCAATGCTCTAGACACCTGGTTGAGCTCCCAGACTTATCTATGGC CACAAATCTTGAAGTATTATCTCTTGATCAGTGTATAAGTTTGCGTGATGTTCATCCATCCATTTTTTCACTCCACAAGC TTTGGCATCTGGGTTTACAATACTGCACAGAGATTGAAAGCCTTGAAAGTAATGTCCATTTAAAATCTATCCGCAGTTTC AATCTCACGAACTGCTCATCCCTGAAGAAATTCTCAATCTTCTCAGAGAAATTGGAGACAGTGTGGTTAGAACGCACAAG TATCCAGAAATTACCCTCATCAATTTGGCATTGTAAGGAACTTCATCATATGACTCTAAGGGACTGCTACAATCTTGAGA GTTTTGGGATTGGGAACAAGTCATCTCATGATCCGTCTTTAAATGAGTTGAATTTGGGAAATTGTTGCAACTTACGAGCA CTCCCTGACACCATTGGCTCGTCAACAAGATTAGAGCGCTTGTACCTAAGTGGAAGCAATGTTGAGATGTTGTCTCCAAA TATCAAGATCCTTTTGAATCTACGAGAGCTTCGGTTAGACGATTGTAGGAAACTTGTGTCTCTTCCAGAGCTTCCACCTT CCCTACACATGTTAAGTGCTATTAACTGCACATCTTTGCACACAGACATCACTCATTTGGTAACAGTGGTACAACACAAC ATACCTGTCAGATTTTATGAAGGACCTTCAGGACGTCCTCAATATGTTGTAATCCCTGGAGACCAAGTTCCGGACATGTT TATCTTTTGTGCTGAAGGGGATTCAATAACGTTTCCGCAACTTCCACAATCTGGCCTGTGCGGCTTTATTTGTTGCCTCG TTCTTTCTCATCTACCTTCAGGGAGCTACCATGGAGATGTCAAGTGTTGTATCAACAAACGTTCCACCTTTGATATAGCT AGAATGTTGTTGTGGGGTACTAATTCCAATTCAGATCATGTGCTTCTTTGCTTTTTGGGAATCAATGGTGAAGATGATTG TTTTGAAAGTGGAACGTGTGATCTTAACAGCATATCATTTGAATTCCAGCTTCTAGATAAGAGTGATGGATTACTCTCCG TGAAAGACATAATAAAGAGGTGCGCGGTCTTAACAGCATGTCATTATGCCTCTCGAGAAAAGACTATTGAGTTTCAACCC AAATCGTTTACATTTGCAGATTTGGCATCACTTTAG
Protein sequence (LotjaGi6g1v0201000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGVGKTTLACALHAKLFSQFEGHCFLKNVREQSEKNGLDALRNRLFSDLLGEENLCVEPHFVTRKLRRKKVFIVLDDVA TSEQLDDLISDYDCLAQGSRVIVTTRDKHIFSLVNDIYEVKELSYHASLQLFCLTAFREKRPKNGFEELSKSVIAYCKGN PLALKVLGPRLRSRNIEVWKSELRKLQKIQDVKIHNVLKMSFYGLDSDEKDIFLDIACFLKGEPREHITSLLDACGFFAA VGIEELIDKSLITISYFNRIEMHDLIQEMGRNVVCQESHKDPGRRSRLWDPEEVYDVLKNNKGTEVVECIILDVSKVKDL HLSFNSFTKMTEMRFLKFYSSIPSEGCKIYLPNGLESLSKKLRRLEWPGYCLESLPSTFCAEMLVKLVMPDSNIQKLWDG VQNVVNLKTIDLQCSRHLVELPDLSMATNLEVLSLDQCISLRDVHPSIFSLHKLWHLGLQYCTEIESLESNVHLKSIRSF NLTNCSSLKKFSIFSEKLETVWLERTSIQKLPSSIWHCKELHHMTLRDCYNLESFGIGNKSSHDPSLNELNLGNCCNLRA LPDTIGSSTRLERLYLSGSNVEMLSPNIKILLNLRELRLDDCRKLVSLPELPPSLHMLSAINCTSLHTDITHLVTVVQHN IPVRFYEGPSGRPQYVVIPGDQVPDMFIFCAEGDSITFPQLPQSGLCGFICCLVLSHLPSGSYHGDVKCCINKRSTFDIA RMLLWGTNSNSDHVLLCFLGINGEDDCFESGTCDLNSISFEFQLLDKSDGLLSVKDIIKRCAVLTACHYASREKTIEFQP KSFTFADLASL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 786 | 786 | 2.3E-170 | – | |
| SUPERFAMILY | 1 | 216 | 216 | 1.35E-49 | ||
| Pfam | 1 | 192 | 192 | 1.7E-25 | ||
| PANTHER | 1 | 786 | 786 | 2.3E-170 | – | |
| Gene3D | 1 | 120 | 120 | 2.5E-19 | – | |
| PRINTS | 66 | 80 | 15 | 9.2E-12 | – | |
| Gene3D | 125 | 206 | 82 | 1.2E-7 | – | |
| PRINTS | 157 | 171 | 15 | 9.2E-12 | – | |
| SUPERFAMILY | 193 | 299 | 107 | 1.36E-13 | ||
| Gene3D | 289 | 491 | 203 | 1.7E-20 | ||
| SUPERFAMILY | 307 | 631 | 325 | 8.33E-38 | – | |
| Pfam | 384 | 402 | 19 | 1.6E-5 | ||
| PRINTS | 472 | 488 | 17 | 9.2E-12 | – | |
| Gene3D | 492 | 640 | 149 | 9.6E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi6g1v0201000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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