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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0210000 |
| Transcript ID | LotjaGi6g1v0210000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Octicosapeptide/Phox/Bem1p domain-containing protein / tetratricopeptide repeat-containing protein; TAIR: AT2G25290.1 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|K7TQE3|HIP_MAIZE HSP-interacting protein; TrEMBL-Plants: tr|I1L282|I1L282_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0210000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50753176..50758280) extracted from Lotus japonicus Gifu genome v1.2.
GGAAAAGAAGATTACCCCACCCAACCCTTGCATGGCAGATTCTCGGTTCAGAAATTTAGCATTATCTGAATATTAATTAA TTTCTCCCTCTTTTGTGGTGGCGTTTACGTCAAGGATGTGAAAAATCTTTCAATTCCTTCCATTCTCCTGCCAAAGTTTC AAGCTTTATATCAGAATTTATCACCCAGATAAGTTTTCATTTGTAATCAAATTCTGGGTCATTTTGTTCACCAATCCTTG TTCTGAAAAAAACCAGAGGGGTGATATCATTTTCCTTCAAATCTGAGCTGGATTTTCCTTGTCCCCTCTCTGAGTTAGGA TTTGTATCAGCTGAAACAAGTCCTGATTTGGAGAGAAGGGTGCTTTTGTATGCAAGTTGTTCAGATAGCTGCCACTGTTC TATATCATCTATGTTTTTGAGGTTTTAAGGGTCCTAATTTGAGGTTTTGAGCTTGTTTCCTGATAGCTTCCACTGTTATA TATCATCTTGGTTGTCCTGTTCTTGTATCAATTTGACTGTTGTAGCTTTTCCATTGTTTCCACTCTGCTAAGTTCACAAG CTTGTCTAATACTAAATTGTCCTTTTTCTTAGAAGCCCTTGTGTTTGGCTTTGGATTGGTTATCTTGTTATAGTTATCTT TCATTTTTATGTACTTGAGTGGATTGAAATGTGAGTGATGTGGACTAGGAGGATTGGTATATTGGATTAGTTTCTTAGCT GTTGGATTGTTGGGTTCAAAATGGGGAAGAAAAAGAAGCAAGTAGGAGAAATAAGTGGTGAAGATAGTGCAAATCAGAGC AAGGTTGGAGATAGAAGCCCAAAAGCATATGATAGTGATACCTTGGTATTTATATCCATGGCTCAAGAGTTGAAGGATGA AGGGAACAAGCTGTTCCAAAAGCGCGATCTTCAAGGAGCAATGGTAAAATATGAGAAAGCCCTCAAATTGCTTCCTGGAA ATCACATAGATGTGTCCTATCTGCGGAGTAACATGGCTGCGTGCTACATGCAGATGGGGCTCAGTGAGTACCCTAGGGCA ATTCATGAATGCAATTTGGCTCTTGAAGTGACACCAAAGTACAGTAAAGCTCTGATGAAGAGGTCGAGGTGCTACGAGGC TTTAAACAGGCTGGATTTAGCACTGAGAGATGTTAGTGCTGTTCTGAAGATGGAGCCAAATAATGTCATGGCTTTGGAGA TCTCAGATAAGGTGAAAAGTGCACTTGAAGATAAAGGATTAAGAGTGAATGATACAGAAATTGAGTTGCCTCCTGATTAT GTTGAACCTCCTATTGCTTTGCCTCCCAAAAAGGTAGTAAAAGAAAAGACACACAAGAAAAGGCACAACAAAGAGAAGGT GAAGGATCTGGATAAAATTGTAGAAAAGCAAACTGAGGAGAAATTAGAAGAGAAAAATGCTGAGGACAGTGTTGCAGTAA AGAAGGAAGAGGATGGTCTGAAAGGGAAGAAGGCTAACACATCTAAAAAGAAGAAGACCAAGGAAAAAGTTGATAAGAAA AAGGATGATGTTAAAGAGGTCTATGAGGTAAAATGTAATGGTAGAAGTGAAGATGTGCCTAAGAAAGCAGTCAAACTTGT TTTTGGTGAGGATATAAGATGTGCTGAATTGCCAGTTGATTGCAGCTTATTTCAGCTAAGAGAAGTTATTCGTGATCGGT TCCCAAGCCTAGGAGCAGTTCTTGTCAAATATCGAGACCAGGAAGGTGATTTGGTCACAATCACTTCTGAAGAAGAACTA AGGTGGGCTGAAACAGGATCACCGGGTTCTATCCGACTGTACATAGTAGAAGCTAATCCTGATCATGATCCACTCTATGA GAAACTTCATGTGAGGGATGGGGAAAAGGATGGTATTTATGATTCTCCTGAGAATGGTCATGTGGTGAAAGCAAAGGAAA TTATCACCTCATCTTGCATTGAGGATTGGATAATTCAGTTTGCACAACTATTCAAGAACCATGTTGGATTTGAATCTGAC AGATATTTAGATTTTCATGAACTTGGGATGAAGCTTTATTCTGAGGCGGTGGAAGAGACAGTTACGAGTGAAGAGGCACA AGGTCTATTTGACATGGCTGGGGGCAAGTTTCAAGAGATGGCAGCTCTAGCTCTGTTTAACTGGGGAAATGTGCATATGT CCAGGGCAAGGAAGAGAGTGTATTTAACAGAAGATTTTTCAAAAGAGCATCTTTGTGAACAAATCAGAAGTTCATATGAA TGGGCACAGAAAGAATATGCAAAAGCTGGAGAAAGATATGAAGCATCCACTAAAATCAAGTCAGATTTTTATGAAGGCTT TCTCGCACTAGGCCAACAGCAGTTTGAGCAAGCAAAACTTTCTTGGTATTATGCACTCAGTAGTAATGTAGATTTAGCCA CATGGCCCTCCACCGAGGTTCTTCATCTTTACAACAGTGCTGAGGAAAATATGGACAAAGGAATGCTGATATGGGAAGAA TCAGAAGAACAAAGGTTGAGTGAAACCTCCAATCAAAGCGATATTAGATCACATTTGCAGAACATGGGGTTGGGTGGACT ATTTAAAAACATGTCATCAGATGAAATTGCTGCACTGGCGGCCAACATGAGGTCCCAAATAAATCTCATGTGGGGAACCA TGCTATATGAGCGCTCAATTGTGGAGTTCAAATTAGGTTTACCGGTATGGCATGAATGCCTGGAAGTTGCAGTTGAGAAG TTTGAACTTGCTGGAGCTTCTCCAACAGATGTAGCAGTAATGTTGAAAAACCACTGTTCAAATAACACTTCCGGAGATGG TATGTTTCAATTTCCTAGTTAGAAAGTTTTTCGCTGGATATATATCTATATATACTAACTGTTTCATCAACAGGTCTAGG TTTCCACATTGATGAAATAGTGCAGGCGTGGAATGAGATGTATGAAGCTAAAAAGTTGCACAAAGGAGTTCCATCATTTC GTTTGGAGCCCTTGTTTCGAAGAAGAGTTTCAAAGATTTACCATGCTTTTGAGCTTGTATAAGTTTCATCTTTTTCTACA AGATGTTGAAGAATAACAGAGCCAGCACTCGTACAAGTTGCATCTTTTTCTGTGCCTGGAATGCTAGTGTCATCACAAGG TAACTAACTAACTAGGAATCTAAGACCTATATTGAATTACTGATAATATTCATGTTATTGCTTTTATTTATGTGGTGTTT TAATGATATACTTTTGTACTTATCTGCATGATTTCTTCTGATATGTCCATTTCTGAGGAATGAGAATCAATGAATGCATC TTGGAAAAGCATCTTATAGATATGAGCATAATAAGTAGCTGAAGTTTGTATAGTATTGTGTTAGTTTTAGCATGTATACT ATAGATTAATAACCAACTGTTTATATGATCATTGCTGTAATTAACTTATGGTGGTTTTGGTTTAAGTTAGCTATTTACTA GCTCTATGACTGATTGTAATAGCTATACTATAATTCTATAAATAAGACCAGGTTCCATCCCAGCAAAAACAATTTCTCCA AACACTTTGCTTCAACAATTAGCATGTCTTCTAAGTGCAGTTTTCCATCAATTATTTATCTGCAACATCTGTTAAAGGTT TCATTACTTCTCGCGCACCTTTGACAATTTCTTCTGCAAAATCCATTTTAAAGTAAGCTTCTCTGTATACCTTACCTGCA CAAGTTCATTAGGGTAGGAAAACGCGACCATAAACTGAGATTTTCATAGTTAAGTTTTGTCGATTTGGGGGCTTGAAATC CCTTGAACATTTGTGACCCATCTAATGAGAGGTGTTGTCAGTTGTGTGCTATTCTAGAGCTCAACTGAATGCTTTCCCTT GCAACTTTTAGTTATGTACATGATTGGCATTGCTTACTGCTATTACTTTCCTGCCTTTGTTCATAAAATATGATAATGTA ATTGTAATGGTTTATCTCCTTTAGTCATGTTTGTTGGCCTATTCTGCAGGTTTCTTTTGCTACTTTCTAGAGTTTGGATT GAAGAATGTACTTATAGGTAGAAACGATTATTTTCATTGCGCATAGACATGTACCAAAAACTTAAAAGAGTTTGCAAGTT CCTTTACAGACTGGGAAGGTGAAGTTTCAGGAAGTGCTTTTTACTCACTTTCTGCAAGTGCTCACATTGCCTTCCCTTTA TGTATGGTTAGATTTATAGGAGCTAGTTGGATATTAAATTTATATGGAAAGCAGTGGGAGATATATATGTATGTTGTTTG TTTATCTGTTTTCCTTGTTCTGTAATTTATCCATTTGTAACTTTTTTTTGTAAACTCATTTGTAACTACTTGTTGAGTTA GTGTTTTTTGATGAAATTTCCTTGTAATGTATCATTCAACTTGCCAATTGCAACTTATTTTGCTTTTGTTGTCGTTTTAT AGTTGCTTTGGTGGTGACATTTATACTAATTGCTGAGAAGCACGTTAATTTTAATGTAATGCTTAGCTTCATATGTTAAT TTTTAAATGGACATTGTTGCTCAGAGCTCACATTGCCACAAGATAAGACAGAAGCCGGCGTTTTCCTTTCCCTGTAATCC AAGTTGTTTTCATTTGTTTGACTGTATCATGAGTCCAGCTAGCCATCAACAATGAGTTGGTGATCTTTTCTCTTTGTTCT TTTCTTAAAATGGGAACAACATTATTTCAATATCAAAGCATTACATGCAATCAAGTCAAGTTTTTCCTTCGTTACTACCA TACCAATAGATGGCTGGTTCAGGTGGTGTATGTTTGTTTGCTTTATGCAGTGTTTCATGTTCGATGCAGAGAACTAGACC CCTATCATGATATGGATGATCTTGGTTCGAGCATAATTGTCTTTCCGTGGTGAAAAAAGAAATTAAACAATTACTAATTC AGTTTACCTTGATGAAAAAAAAAATCCACTGTGTGCTGTAGTGTGAAACTAGCATTGGAATAACTTGAAGAATACGTAAA TAACACATTTACAGAAAAATGTTTCCCGTTCAAACCAATCCAATACCACAGAGATTCGCATGCTGGTAAACAGCCATTGC TTCCATTGTAAAAAAAGCAAAAAAACCATCTCTATATCATTGTGACGAAGATTGCATCTAAATCA
CDS sequence (LotjaGi6g1v0210000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAGAAAAAGAAGCAAGTAGGAGAAATAAGTGGTGAAGATAGTGCAAATCAGAGCAAGGTTGGAGATAGAAGCCC AAAAGCATATGATAGTGATACCTTGGTATTTATATCCATGGCTCAAGAGTTGAAGGATGAAGGGAACAAGCTGTTCCAAA AGCGCGATCTTCAAGGAGCAATGGTAAAATATGAGAAAGCCCTCAAATTGCTTCCTGGAAATCACATAGATGTGTCCTAT CTGCGGAGTAACATGGCTGCGTGCTACATGCAGATGGGGCTCAGTGAGTACCCTAGGGCAATTCATGAATGCAATTTGGC TCTTGAAGTGACACCAAAGTACAGTAAAGCTCTGATGAAGAGGTCGAGGTGCTACGAGGCTTTAAACAGGCTGGATTTAG CACTGAGAGATGTTAGTGCTGTTCTGAAGATGGAGCCAAATAATGTCATGGCTTTGGAGATCTCAGATAAGGTGAAAAGT GCACTTGAAGATAAAGGATTAAGAGTGAATGATACAGAAATTGAGTTGCCTCCTGATTATGTTGAACCTCCTATTGCTTT GCCTCCCAAAAAGGTAGTAAAAGAAAAGACACACAAGAAAAGGCACAACAAAGAGAAGGTGAAGGATCTGGATAAAATTG TAGAAAAGCAAACTGAGGAGAAATTAGAAGAGAAAAATGCTGAGGACAGTGTTGCAGTAAAGAAGGAAGAGGATGGTCTG AAAGGGAAGAAGGCTAACACATCTAAAAAGAAGAAGACCAAGGAAAAAGTTGATAAGAAAAAGGATGATGTTAAAGAGGT CTATGAGGTAAAATGTAATGGTAGAAGTGAAGATGTGCCTAAGAAAGCAGTCAAACTTGTTTTTGGTGAGGATATAAGAT GTGCTGAATTGCCAGTTGATTGCAGCTTATTTCAGCTAAGAGAAGTTATTCGTGATCGGTTCCCAAGCCTAGGAGCAGTT CTTGTCAAATATCGAGACCAGGAAGGTGATTTGGTCACAATCACTTCTGAAGAAGAACTAAGGTGGGCTGAAACAGGATC ACCGGGTTCTATCCGACTGTACATAGTAGAAGCTAATCCTGATCATGATCCACTCTATGAGAAACTTCATGTGAGGGATG GGGAAAAGGATGGTATTTATGATTCTCCTGAGAATGGTCATGTGGTGAAAGCAAAGGAAATTATCACCTCATCTTGCATT GAGGATTGGATAATTCAGTTTGCACAACTATTCAAGAACCATGTTGGATTTGAATCTGACAGATATTTAGATTTTCATGA ACTTGGGATGAAGCTTTATTCTGAGGCGGTGGAAGAGACAGTTACGAGTGAAGAGGCACAAGGTCTATTTGACATGGCTG GGGGCAAGTTTCAAGAGATGGCAGCTCTAGCTCTGTTTAACTGGGGAAATGTGCATATGTCCAGGGCAAGGAAGAGAGTG TATTTAACAGAAGATTTTTCAAAAGAGCATCTTTGTGAACAAATCAGAAGTTCATATGAATGGGCACAGAAAGAATATGC AAAAGCTGGAGAAAGATATGAAGCATCCACTAAAATCAAGTCAGATTTTTATGAAGGCTTTCTCGCACTAGGCCAACAGC AGTTTGAGCAAGCAAAACTTTCTTGGTATTATGCACTCAGTAGTAATGTAGATTTAGCCACATGGCCCTCCACCGAGGTT CTTCATCTTTACAACAGTGCTGAGGAAAATATGGACAAAGGAATGCTGATATGGGAAGAATCAGAAGAACAAAGGTTGAG TGAAACCTCCAATCAAAGCGATATTAGATCACATTTGCAGAACATGGGGTTGGGTGGACTATTTAAAAACATGTCATCAG ATGAAATTGCTGCACTGGCGGCCAACATGAGGTCCCAAATAAATCTCATGTGGGGAACCATGCTATATGAGCGCTCAATT GTGGAGTTCAAATTAGGTTTACCGGTATGGCATGAATGCCTGGAAGTTGCAGTTGAGAAGTTTGAACTTGCTGGAGCTTC TCCAACAGATGTAGCAGTAATGTTGAAAAACCACTGTTCAAATAACACTTCCGGAGATGGTCTAGGTTTCCACATTGATG AAATAGTGCAGGCGTGGAATGAGATGTATGAAGCTAAAAAGTTGCACAAAGGAGTTCCATCATTTCGTTTGGAGCCCTTG TTTCGAAGAAGAGTTTCAAAGATTTACCATGCTTTTGAGCTTGTATAA
Protein sequence (LotjaGi6g1v0210000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKKKKQVGEISGEDSANQSKVGDRSPKAYDSDTLVFISMAQELKDEGNKLFQKRDLQGAMVKYEKALKLLPGNHIDVSY LRSNMAACYMQMGLSEYPRAIHECNLALEVTPKYSKALMKRSRCYEALNRLDLALRDVSAVLKMEPNNVMALEISDKVKS ALEDKGLRVNDTEIELPPDYVEPPIALPPKKVVKEKTHKKRHNKEKVKDLDKIVEKQTEEKLEEKNAEDSVAVKKEEDGL KGKKANTSKKKKTKEKVDKKKDDVKEVYEVKCNGRSEDVPKKAVKLVFGEDIRCAELPVDCSLFQLREVIRDRFPSLGAV LVKYRDQEGDLVTITSEEELRWAETGSPGSIRLYIVEANPDHDPLYEKLHVRDGEKDGIYDSPENGHVVKAKEIITSSCI EDWIIQFAQLFKNHVGFESDRYLDFHELGMKLYSEAVEETVTSEEAQGLFDMAGGKFQEMAALALFNWGNVHMSRARKRV YLTEDFSKEHLCEQIRSSYEWAQKEYAKAGERYEASTKIKSDFYEGFLALGQQQFEQAKLSWYYALSSNVDLATWPSTEV LHLYNSAEENMDKGMLIWEESEEQRLSETSNQSDIRSHLQNMGLGGLFKNMSSDEIAALAANMRSQINLMWGTMLYERSI VEFKLGLPVWHECLEVAVEKFELAGASPTDVAVMLKNHCSNNTSGDGLGFHIDEIVQAWNEMYEAKKLHKGVPSFRLEPL FRRRVSKIYHAFELV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 28 | 28 | - | – | |
| PANTHER | 2 | 734 | 733 | 0.0 | – | |
| PANTHER | 2 | 734 | 733 | 0.0 | – | |
| Gene3D | 34 | 178 | 145 | 2.0E-30 | ||
| SUPERFAMILY | 40 | 153 | 114 | 8.26E-25 | ||
| SMART | 41 | 74 | 34 | 0.33 | ||
| ProSiteProfiles | 41 | 148 | 108 | 18.356 | ||
| ProSiteProfiles | 41 | 74 | 34 | 8.437 | ||
| SMART | 79 | 114 | 36 | 32.0 | ||
| SMART | 115 | 148 | 34 | 0.33 | ||
| ProSiteProfiles | 115 | 148 | 34 | 8.467 | ||
| MobiDBLite | 178 | 258 | 81 | - | – | |
| MobiDBLite | 204 | 244 | 41 | - | – | |
| ProSiteProfiles | 281 | 358 | 78 | 13.131 | ||
| SMART | 281 | 358 | 78 | 2.1E-12 | ||
| Gene3D | 281 | 347 | 67 | 3.2E-7 | – | |
| SUPERFAMILY | 282 | 367 | 86 | 2.61E-15 | – | |
| Pfam | 283 | 355 | 73 | 8.3E-13 | ||
| CDD | 284 | 355 | 72 | 1.41834E-9 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0210000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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