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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0224300 |
| Transcript ID | LotjaGi6g1v0224300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Subtilisin-like protease; TAIR: AT2G05920.1 Subtilase family protein; Swiss-Prot: sp|Q9ZUF6|SBT18_ARATH Subtilisin-like protease SBT1.8; TrEMBL-Plants: tr|G7IGE1|G7IGE1_MEDTR Subtilisin-like serine protease; Found in the gene: LotjaGi6g1v0224300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:52914686..52918089) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAGCTCTTTTCAAATAAATAAATAAAAATCCAAAAGCTCATTATAAACCTGACACCGCATGCGCTTTTCTCTCTCTT TCTTTTTCTTCGATTCTCATCATTCTCATTATTTAACCATTAAACACACACACTCTTCTCTTCACTTCACTCATTTCCTT TCCTTTCTCTTCTCTTCTCCAAAATGGCTTCCATTCCAATTTCAACTCTCTCCTTCACCTTCATCCTCCTCCTCCTACAA TGCCTCTCTGCATCATGCTCTTCCCCCAAGAAGACATACATTGTCCACATGAACCACCACACCAAACCCCAGATCTACCC CACCCGCCGCGACTGGTACACCGCCAGCCTCCGATCTCTTTCTCTCACAACTGACTCAGAAACCTCCGATGACCCACTTC TCTACGCCTACGACACCGCCTACAACGGTTTCGCCGCTTCCCTTGACGAACAACAAGCCCAGACCCTGCTCGGATCTGAT TCCGTTCTGGGTCTCTATGAAGACACTCTCTACCATCTTCACACCACGCGTACTCCCCAGTTTCTGGGGCTTGACACACA AACGGGGTTGTGGGAAGGACATAGAACTCTGGAACTTGACCAGGCTTCTCGTGATGTTATCATTGGAGTGCTTGACACCG GAGTGTGGCCGGAGTCTCCTAGCTTCAACGACGCCGGAATGCCAGAGATCCCATCACGGTGGCGCGGTGAGTGTGAGAAC GCCACTGATTTCTCATCCTCGCTTTGCAACAGGAAACTCATCGGAGCCAGAAGCTTCTCCAGAGGCTTCCACATGGCTGC CGGTAACGACGGCGGTTTCGGAAAAGAGAGAGAGCCACCGTCGCCGCGTGACAGCGACGGTCACGGCACCCACACTGCCA GCACCGCCGCGGGATCCCACGTCGGGAACGCTAGTCTCCTCGGTTACGCTAGCGGAACCGCTAGAGGCATGGCTCCACAG GCGCGTGTTGCCACGTACAAGGTTTGCTGGAGCGACGGTTGCTTCGCGTCCGACATTCTCGCCGGAATGGACCGCGCCAT CAGGGACGGCGTTGATGTTCTCTCACTCTCCCTCGGTGGTGGGTCTGGTCCTTACTTCCGTGACACCATTGCCATCGGAG CGTTTGCAGCGATGGAGCGTGGGATCTTCGTGTCCTGCTCCGCCGGGAACAGCGGTCCAAGCAAAGCCTCACTCGCCAAC GTCGCGCCGTGGTTGATGACCGTCGGCGCCGGAACGCTCGACCGGGATTTCCCCGCCTCGGCCTTGCTCGGGAACAAGAA GCGGTTCGCCGGGGTTTCTCTCTACAGCGGAAAAGGAATGGGGGCTGAACCGGTTGGTTTGGTTTACAGCAAGGGGTCGA ACCAGTCCGGTATCTTATGCCTACCCGGTTCACTCGACCCGGCGGTGGTTCGTGGAAAAGTGGTTCTCTGCGACCGTGGG TTGAACGCGCGGGTGGAGAAGGGTAAAGTCGTGAAAGAAGCCGGCGGAATTGGGATGATTCTGACCAACACCGCCGCGAA CGGGGAAGAGCTTGTGGCGGATAGTCACCTGCTACCGGCTGTTGCGGTTGGGAGAATCGTGGGGGACCAGATCAGAGAAT ACGTGACGTCTGATCCTAATCCAACGGCAGTTTTGAGTTTCAGTGGGACCGTTTTGAACGTTAGACCCTCCCCTGTGGTT GCAGCTTTCAGTTCTCGTGGTCCCAACATGATCACCAAGCAGATCCTGAAACCTGATGTGATTGGGCCTGGTGTTAACAT CTTAGCAGGATGGTCAGAAGCTATTGGGCCCTCTGGGCTTCCTCAGGACTCTCGCAAATCACAGTTCAACATCATGTCAG GTATAATATTTTTGCGATACATAAAGTTTCTGGATCGGTCACTAGTAACATTCAATTAAGTTTCTGAATCCGTTAACATA AAGTTTATGGATCGGTCATTGTAATGCTCATTAAGTTTTTGAATCGGTTGATGTGACATAAAGTTTCTGGATCCGTTACT GCGCGTATATTTTGGATTGAGGTTATTTGTTTTGTGATTATAGGTACTTCAATGTCATGTCCACACATAAGTGGATTGGG CGCGTTGCTGAAAGCAGCACATCCAGATTGGAGTCCGAGTGCGATTAAATCAGCACTAATGACAACAGCTTATGTTCATG ACAACACCAATTCACCGCTTCGCGATGCAGCTGGAGGGGAGTTTTCTACTCCATGGGCTCACGGTGCCGGCCATGTGAAT CCGCAGAAAGCGCTATCTCCTGGACTTGTGTATGATGCTAAAGCAAGGGACTACATTGCGTTTTTGTGCTCGTTGGATTA CTCACCTGACCACCTTCAGCTTATTGTGAAGCGGGCTGGAGTTAATTGTTCTAGGAAGTTGTCTGATCCTGGTCAGTTGA ACTACCCGTCTTTCTCGGTGGTGTTTGACTCGGTGGTGTTTGACGCGAAGAAGGTTGTGAGGTACACGAGGACCGTTACC AATGTTGGCGAGGCGGGTTCTGTCTATGATGTTGTCGTTGATGGGCCTTCCATGGTTGGGATCACGGTGTATCCGACGAA GCTTGAGTTTGGGAAAGTAGGGGAGAGGAAAAGGTACACTGTGACCTTTGTGTCAAAGAAGGGTGCTTCTGATGATTTGG TTAGGTCTGCATTTGGTAGCATTACATGGAAAAATGAACAGCACCAAGTTAGAAGCCCTGTTGCTTTTGCTTGGACAGAG TTGTGAGCTTGTGGGTTACACTTTCACACTATTTCAAGCCCAGCAAGCCCTTTGCCTTGAGCCTATAGTGAAAAAAAAGA AAATGAAACAAAGGAGGTGCTTTGATATAACACCTTGAGGCTTGGTTGATCTTGCAATTAACATTATTACTTGTATGTTT AGAAGGTTGTGCTTTTTTCTTTTTTTCTTTCTTGTTGGGGATATTTGATGAACAAAGTTGAGATTGAAAAGAGGGGGTGA AGAAGGGAATGGAAAAATGATTGCTTGCTCTCTTTGTTTGTGTAGTTAGTTTTGTGTACCCAGTAAAATTGATGTTACAA ACAGAGGATGTTGATGTTATTATATTAACGAGCTGGCTATACCATTTGATTAACAAACTTGACCCTTTGTTGTGTGCAAG TGCAAGAGACTCGATTCCACGAATCCATCTTCATTTACTTTGCCCCTTCAACTCATTTAAAATTGCAGTTGAATATCGTT GTTGTCTATATATAATATTCATGAATCTAGAGTCAAAAAGATTAATCTCTTTACCTTTTAGCCAATTCTCATGGCCTATT TATCAACATGTTTCCGCAGTTGCTGAAAATTCATTATACCATCTTTCTACCAAATAACTTCTCAACAAGCAAGAGAATTA GTAATTAGATATGGATTTTGATATTTTCCTGATAGGAACTGAGG
CDS sequence (LotjaGi6g1v0224300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCATTCCAATTTCAACTCTCTCCTTCACCTTCATCCTCCTCCTCCTACAATGCCTCTCTGCATCATGCTCTTC CCCCAAGAAGACATACATTGTCCACATGAACCACCACACCAAACCCCAGATCTACCCCACCCGCCGCGACTGGTACACCG CCAGCCTCCGATCTCTTTCTCTCACAACTGACTCAGAAACCTCCGATGACCCACTTCTCTACGCCTACGACACCGCCTAC AACGGTTTCGCCGCTTCCCTTGACGAACAACAAGCCCAGACCCTGCTCGGATCTGATTCCGTTCTGGGTCTCTATGAAGA CACTCTCTACCATCTTCACACCACGCGTACTCCCCAGTTTCTGGGGCTTGACACACAAACGGGGTTGTGGGAAGGACATA GAACTCTGGAACTTGACCAGGCTTCTCGTGATGTTATCATTGGAGTGCTTGACACCGGAGTGTGGCCGGAGTCTCCTAGC TTCAACGACGCCGGAATGCCAGAGATCCCATCACGGTGGCGCGGTGAGTGTGAGAACGCCACTGATTTCTCATCCTCGCT TTGCAACAGGAAACTCATCGGAGCCAGAAGCTTCTCCAGAGGCTTCCACATGGCTGCCGGTAACGACGGCGGTTTCGGAA AAGAGAGAGAGCCACCGTCGCCGCGTGACAGCGACGGTCACGGCACCCACACTGCCAGCACCGCCGCGGGATCCCACGTC GGGAACGCTAGTCTCCTCGGTTACGCTAGCGGAACCGCTAGAGGCATGGCTCCACAGGCGCGTGTTGCCACGTACAAGGT TTGCTGGAGCGACGGTTGCTTCGCGTCCGACATTCTCGCCGGAATGGACCGCGCCATCAGGGACGGCGTTGATGTTCTCT CACTCTCCCTCGGTGGTGGGTCTGGTCCTTACTTCCGTGACACCATTGCCATCGGAGCGTTTGCAGCGATGGAGCGTGGG ATCTTCGTGTCCTGCTCCGCCGGGAACAGCGGTCCAAGCAAAGCCTCACTCGCCAACGTCGCGCCGTGGTTGATGACCGT CGGCGCCGGAACGCTCGACCGGGATTTCCCCGCCTCGGCCTTGCTCGGGAACAAGAAGCGGTTCGCCGGGGTTTCTCTCT ACAGCGGAAAAGGAATGGGGGCTGAACCGGTTGGTTTGGTTTACAGCAAGGGGTCGAACCAGTCCGGTATCTTATGCCTA CCCGGTTCACTCGACCCGGCGGTGGTTCGTGGAAAAGTGGTTCTCTGCGACCGTGGGTTGAACGCGCGGGTGGAGAAGGG TAAAGTCGTGAAAGAAGCCGGCGGAATTGGGATGATTCTGACCAACACCGCCGCGAACGGGGAAGAGCTTGTGGCGGATA GTCACCTGCTACCGGCTGTTGCGGTTGGGAGAATCGTGGGGGACCAGATCAGAGAATACGTGACGTCTGATCCTAATCCA ACGGCAGTTTTGAGTTTCAGTGGGACCGTTTTGAACGTTAGACCCTCCCCTGTGGTTGCAGCTTTCAGTTCTCGTGGTCC CAACATGATCACCAAGCAGATCCTGAAACCTGATGTGATTGGGCCTGGTGTTAACATCTTAGCAGGATGGTCAGAAGCTA TTGGGCCCTCTGGGCTTCCTCAGGACTCTCGCAAATCACAGTTCAACATCATGTCAGGTACTTCAATGTCATGTCCACAC ATAAGTGGATTGGGCGCGTTGCTGAAAGCAGCACATCCAGATTGGAGTCCGAGTGCGATTAAATCAGCACTAATGACAAC AGCTTATGTTCATGACAACACCAATTCACCGCTTCGCGATGCAGCTGGAGGGGAGTTTTCTACTCCATGGGCTCACGGTG CCGGCCATGTGAATCCGCAGAAAGCGCTATCTCCTGGACTTGTGTATGATGCTAAAGCAAGGGACTACATTGCGTTTTTG TGCTCGTTGGATTACTCACCTGACCACCTTCAGCTTATTGTGAAGCGGGCTGGAGTTAATTGTTCTAGGAAGTTGTCTGA TCCTGGTCAGTTGAACTACCCGTCTTTCTCGGTGGTGTTTGACTCGGTGGTGTTTGACGCGAAGAAGGTTGTGAGGTACA CGAGGACCGTTACCAATGTTGGCGAGGCGGGTTCTGTCTATGATGTTGTCGTTGATGGGCCTTCCATGGTTGGGATCACG GTGTATCCGACGAAGCTTGAGTTTGGGAAAGTAGGGGAGAGGAAAAGGTACACTGTGACCTTTGTGTCAAAGAAGGGTGC TTCTGATGATTTGGTTAGGTCTGCATTTGGTAGCATTACATGGAAAAATGAACAGCACCAAGTTAGAAGCCCTGTTGCTT TTGCTTGGACAGAGTTGTGA
Protein sequence (LotjaGi6g1v0224300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASIPISTLSFTFILLLLQCLSASCSSPKKTYIVHMNHHTKPQIYPTRRDWYTASLRSLSLTTDSETSDDPLLYAYDTAY NGFAASLDEQQAQTLLGSDSVLGLYEDTLYHLHTTRTPQFLGLDTQTGLWEGHRTLELDQASRDVIIGVLDTGVWPESPS FNDAGMPEIPSRWRGECENATDFSSSLCNRKLIGARSFSRGFHMAAGNDGGFGKEREPPSPRDSDGHGTHTASTAAGSHV GNASLLGYASGTARGMAPQARVATYKVCWSDGCFASDILAGMDRAIRDGVDVLSLSLGGGSGPYFRDTIAIGAFAAMERG IFVSCSAGNSGPSKASLANVAPWLMTVGAGTLDRDFPASALLGNKKRFAGVSLYSGKGMGAEPVGLVYSKGSNQSGILCL PGSLDPAVVRGKVVLCDRGLNARVEKGKVVKEAGGIGMILTNTAANGEELVADSHLLPAVAVGRIVGDQIREYVTSDPNP TAVLSFSGTVLNVRPSPVVAAFSSRGPNMITKQILKPDVIGPGVNILAGWSEAIGPSGLPQDSRKSQFNIMSGTSMSCPH ISGLGALLKAAHPDWSPSAIKSALMTTAYVHDNTNSPLRDAAGGEFSTPWAHGAGHVNPQKALSPGLVYDAKARDYIAFL CSLDYSPDHLQLIVKRAGVNCSRKLSDPGQLNYPSFSVVFDSVVFDAKKVVRYTRTVTNVGEAGSVYDVVVDGPSMVGIT VYPTKLEFGKVGERKRYTVTFVSKKGASDDLVRSAFGSITWKNEQHQVRSPVAFAWTEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| Gene3D | 19 | 113 | 95 | 1.1E-10 | ||
| Phobius | 19 | 22 | 4 | - | – | |
| PANTHER | 22 | 777 | 756 | 0.0 | – | |
| PANTHER | 22 | 777 | 756 | 0.0 | – | |
| Phobius | 23 | 779 | 757 | - | – | |
| Pfam | 31 | 113 | 83 | 6.2E-12 | ||
| CDD | 110 | 589 | 480 | 2.23645E-139 | ||
| SUPERFAMILY | 112 | 627 | 516 | 6.15E-78 | ||
| ProSiteProfiles | 126 | 623 | 498 | 28.722 | – | |
| PRINTS | 142 | 161 | 20 | 1.4E-14 | ||
| Pfam | 143 | 593 | 451 | 1.9E-49 | ||
| Gene3D | 144 | 637 | 494 | 2.9E-182 | ||
| MobiDBLite | 207 | 236 | 30 | - | – | |
| PRINTS | 223 | 236 | 14 | 1.4E-14 | ||
| Gene3D | 353 | 491 | 139 | 2.9E-182 | – | |
| CDD | 362 | 482 | 121 | 1.09643E-38 | – | |
| Pfam | 406 | 470 | 65 | 6.0E-10 | ||
| PRINTS | 552 | 568 | 17 | 1.4E-14 | ||
| ProSitePatterns | 553 | 563 | 11 | - | ||
| Gene3D | 640 | 776 | 137 | 2.0E-34 | – | |
| Pfam | 670 | 773 | 104 | 1.0E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi6g1v0224300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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