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LotjaGi6g1v0231700.4

Overview

Field Value
Gene ID LotjaGi6g1v0231700
Transcript ID LotjaGi6g1v0231700.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT5G56890.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2; TrEMBL-Plants: tr|G7III2|G7III2_MEDTR Receptor-like Serine/Threonine-kinase ALE2; Found in the gene: LotjaGi6g1v0231700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:54061803..54064680) extracted from Lotus japonicus Gifu genome v1.2.

ATGAAAGTCGGCCTTCGCCTTAGTGTTCCTCTGTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCTGAAATTGCCAC TGGGGTTTTCATGACGCAAAGTCAAGTTCGCATTATGGGAGCCAATGAAGCAACCCAGCAACCAGATAAAACTGATGCCC TTATTGATTTGGTACCACTCGGGGAAGAGTTTGATAACACTACCGCGTTTTTAACTTCTGATAGATTTTGGCATAAAAAG GTTGCAATAAAAGCTTCTAACTTTGGGGATTATAAAGTGTTATATGTGAGCTATCCAGGTATGTAAAAATTCTTAATTTG TTGTATTCTTTTCATGAATTTTCTTGTCAGAATTTTATGGGATTCTTTAAACGCAGGTTTACCTCCGTCTCCTCCTTTGC CACCTTCAAGCATTAACATGATAGATGGTGGTCCATATTCAATTGATGGCAATAATGGTAGGACAATTAAGCCCCTCGGG GTTGACATACCGAAGAGGCAGCAAAAAGGTGGACTTAGCAAGGGCGTGATAGCTATTATTGCTCTCTCAGTTTTTCTAGC AGTTGTTTTATGCTCTGCTGCTGCTTTGGCCGTTTTCAAGTGCAGAGAGCATGTGAGTCAATCAACATTGACACCACCGG TTTTGCCTTCGTCTCTTACTAAAACACCAGGTAATGCAATTGATAATTACTAATAATCTGGTAAATTAATGCATTTTCCC AGAAAACAACACTATATCATACCCAAAAAGAAAAGAAAAACATCGTCTTTACGAATTACAAGCCATATTTTTAGTATTTG TCTCATCTAATTGAATTAGTCAGACAATGGTTGTCAGAATTCTATGCATAAAATAGAAAGATCAGTTGCAATAATTTAAA TAATCAAGATAATTTTGACAAGTATGGTATTTTGAAACTGAATAATTGCAGTCCTATAATTTTGAATGTTTTCCCATCTC CCAATTTGCGTCAATTTGATTGTTTTATCATTTATCTCAGCCGTTTTTATTTAAGAAACAAACATATGATTCACAGGTAC CGCCAGGTCAATAGTTGGAGGTGTGCCTGCTTCAGCTTCATCATCTTCATTTCGATCTAGCATTGCTGCTTATACAGGAT CTGCTAAAACTTTCAGTTTGAAGGAGATAGAGAAAGCCACTGATAATTTTCATGCTTCCAGAATACTAGGAGAAGGTGGT TTTGGGCTAGTTTATGGTGGGAACCTTGAAGATGGTACAAAAGTAGCAGTCAAGGTTCTCAAAAGGGAAGACCATCATGG TGATCGTGAATTCTTATCTGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAATTTGGTGAAGTTGATTGGTATATGCT CAGAGCTCAGCTCCCGCTGCCTGGTTTATGAACTCGTTCCAAATGGCAGCGTGGAATCCCATTTACATGGTACTTAAGTT TGCTTGATTCAGCGTCATGTACAAGTCAATTGTTTTTGGCTTGTTTGGTTTTAGAAAATACTTTTTGAGTTTTAGTTATG TTTTCACTTTTCATTACGAAAAAGTCACTTCCCCTTTTCAAAGATTTGTGTAGGAACTAGTGAAAATAATAAAATGTTAT TTTCTCTAATGTTCAACTATTTAAAAAGAGGAAACAAAGGAACAATAAGGCGGTAATTATGTCTTTGAAAGAGAAAACCA AAATGAAAATAGAAATCTTTTGCTCAAATCAAACATCTTTAGTTCTTTAATATAATGGTCTTCTTGTATTTGGTCTTTTG CTAGGAGATGACAGGGAAAGAAGCGCACTTGATTGGAGTACTCGGATAAAGATAGCACTTGGTGCTGCTCGAGGTCTGGC TTACCTGCATGAAGATTCAAGTCCTCATGTCATACATAGGGACTTCAAGTCAAGCAATATCTTGCTGGAAGATGATTTTA CACCAAAAGTATCTGATTTTGGATTGGCACGGACAGCAGCTGATGGGGAGAACAGACATATATCCACACGTGTCATGGGA ACTTTCGGGTACATAGTTTTCTAATATTATTGTTTCTATTTTGGAAACTACTATCTACAAGTTATCAGCTGGTATCATTA TAATAACCAAACTCTTAATGTTTCATCAAAATTCATGGAAATATCTCCATTCGTAGTCATTGGAAAAGATTGTAATTCCT TGTTGAGTTTTACTATTATGCATTCCCTGATATATATTTCCTTTCATATTTGAAAAACCAACTCAGTTATGTGGCTCCGG AGTACGCAATGACTGGGCATCTTCTTGTGAAGAGCGATGTTTACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGA AGAAAACCAATAGACATGTCACAACCCCCTGGTCAAGAGAATCTCGTCGCATGGGCTCGTCCACTCCTCACAAGTAAAGA AGGATTAGAAGCATTAATTGATCCATCTCTAGGAACTGATGTGCCATTTGATAGTGTGGCAAAAGTTGCAGCCATTGCTT CGATGTGTGTACAACCAGAGGTATCAGACCGTCCATTCATGGGTGAGGTTGTTCAGGCTTTAAAACTTGTTTGTAATGAA TGTGATGAAGCAAAAGAAGCAGGTTCAAGAGGTTCTAGCCGGGAGGATTTATCTGTTGATTCGATTACTCATCTAGATAA TTTCCAAGGCCATTTCTCAGACACCTACCATGATTCCGAAGTTGATATTGAAAGAGGGTTGTCAGCATCAGACTTATTCA GCTCATCAGCAAGATTACGAAGGCAGGCATCTGGATCATTTAGAATGCATTCTTATTCAGGTCCTCTCAGAACTGGAAGA AGCCAGCAGTTGTGGCAGATAATTCGAAAGCTTTCTGGTGGTAGTGTCAGTGAACATGGACCTATGTTCAAGTCATGA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0231700.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAAGTCGGCCTTCGCCTTAGTGTTCCTCTGTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCTGAAATTGCCAC TGGGGTTTTCATGACGCAAAGTCAAGTTCGCATTATGGGAGCCAATGAAGCAACCCAGCAACCAGATAAAACTGATGCCC TTATTGATTTGGTACCACTCGGGGAAGAGTTTGATAACACTACCGCGTTTTTAACTTCTGATAGATTTTGGCATAAAAAG GTTGCAATAAAAGCTTCTAACTTTGGGGATTATAAAGTGTTATATGTGAGCTATCCAGGTTTACCTCCGTCTCCTCCTTT GCCACCTTCAAGCATTAACATGATAGATGGTGGTCCATATTCAATTGATGGCAATAATGGTAGGACAATTAAGCCCCTCG GGGTTGACATACCGAAGAGGCAGCAAAAAGGTGGACTTAGCAAGGGCGTGATAGCTATTATTGCTCTCTCAGTTTTTCTA GCAGTTGTTTTATGCTCTGCTGCTGCTTTGGCCGTTTTCAAGTGCAGAGAGCATGTGAGTCAATCAACATTGACACCACC GGTTTTGCCTTCGTCTCTTACTAAAACACCAGGTACCGCCAGGTCAATAGTTGGAGGTGTGCCTGCTTCAGCTTCATCAT CTTCATTTCGATCTAGCATTGCTGCTTATACAGGATCTGCTAAAACTTTCAGTTTGAAGGAGATAGAGAAAGCCACTGAT AATTTTCATGCTTCCAGAATACTAGGAGAAGGTGGTTTTGGGCTAGTTTATGGTGGGAACCTTGAAGATGGTACAAAAGT AGCAGTCAAGGTTCTCAAAAGGGAAGACCATCATGGTGATCGTGAATTCTTATCTGAAGTTGAGATGCTTAGCCGCCTTC ACCATAGAAATTTGGTGAAGTTGATTGGTATATGCTCAGAGCTCAGCTCCCGCTGCCTGGTTTATGAACTCGTTCCAAAT GGCAGCGTGGAATCCCATTTACATGGAGATGACAGGGAAAGAAGCGCACTTGATTGGAGTACTCGGATAAAGATAGCACT TGGTGCTGCTCGAGGTCTGGCTTACCTGCATGAAGATTCAAGTCCTCATGTCATACATAGGGACTTCAAGTCAAGCAATA TCTTGCTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCACGGACAGCAGCTGATGGGGAGAACAGACAT ATATCCACACGTGTCATGGGAACTTTCGGTTATGTGGCTCCGGAGTACGCAATGACTGGGCATCTTCTTGTGAAGAGCGA TGTTTACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCAATAGACATGTCACAACCCCCTGGTCAAG AGAATCTCGTCGCATGGGCTCGTCCACTCCTCACAAGTAAAGAAGGATTAGAAGCATTAATTGATCCATCTCTAGGAACT GATGTGCCATTTGATAGTGTGGCAAAAGTTGCAGCCATTGCTTCGATGTGTGTACAACCAGAGGTATCAGACCGTCCATT CATGGGTGAGGTTGTTCAGGCTTTAAAACTTGTTTGTAATGAATGTGATGAAGCAAAAGAAGCAGGTTCAAGAGGTTCTA GCCGGGAGGATTTATCTGTTGATTCGATTACTCATCTAGATAATTTCCAAGGCCATTTCTCAGACACCTACCATGATTCC GAAGTTGATATTGAAAGAGGGTTGTCAGCATCAGACTTATTCAGCTCATCAGCAAGATTACGAAGGCAGGCATCTGGATC ATTTAGAATGCATTCTTATTCAGGTCCTCTCAGAACTGGAAGAAGCCAGCAGTTGTGGCAGATAATTCGAAAGCTTTCTG GTGGTAGTGTCAGTGAACATGGACCTATGTTCAAGTCATGA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0231700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKVGLRLSVPLYTFFPLVSELASEIATGVFMTQSQVRIMGANEATQQPDKTDALIDLVPLGEEFDNTTAFLTSDRFWHKK VAIKASNFGDYKVLYVSYPGLPPSPPLPPSSINMIDGGPYSIDGNNGRTIKPLGVDIPKRQQKGGLSKGVIAIIALSVFL AVVLCSAAALAVFKCREHVSQSTLTPPVLPSSLTKTPGTARSIVGGVPASASSSSFRSSIAAYTGSAKTFSLKEIEKATD NFHASRILGEGGFGLVYGGNLEDGTKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICSELSSRCLVYELVPN GSVESHLHGDDRERSALDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLEDDFTPKVSDFGLARTAADGENRH ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPIDMSQPPGQENLVAWARPLLTSKEGLEALIDPSLGT DVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSRGSSREDLSVDSITHLDNFQGHFSDTYHDS EVDIERGLSASDLFSSSARLRRQASGSFRMHSYSGPLRTGRSQQLWQIIRKLSGGSVSEHGPMFKS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27001
1 548 548 4.7E-301 –
PANTHER
PTHR27001:SF814
1 548 548 4.7E-301 –
Phobius
CYTOPLASMIC_DOMAIN
1 148 148 - –
TMHMM
TMhelix
149 171 23 - –
Phobius
TRANSMEMBRANE
149 173 25 - –
Phobius
NON_CYTOPLASMIC_DOMAIN
174 626 453 - –
Gene3D
G3DSA:3.30.200.20
213 317 105 1.2E-34 –
SUPERFAMILY
SSF56112
222 515 294 2.6E-81
IPR011009
ProSiteProfiles
PS50011
242 518 277 38.153
IPR000719
Pfam
PF07714
244 515 272 2.1E-48
IPR001245
CDD
cd14066
248 516 269 8.8723E-102 –
ProSitePatterns
PS00107
248 270 23 -
IPR017441
Gene3D
G3DSA:1.10.510.10
318 537 220 4.6E-60 –
ProSitePatterns
PS00108
364 376 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0231700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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