Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0311200 |
| Transcript ID | LotjaGi6g1v0311200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | KH domain-containing protein; TAIR: AT5G46190.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375; TrEMBL-Plants: tr|A0A1J7I5W2|A0A1J7I5W2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0311200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:62967722..62977554) extracted from Lotus japonicus Gifu genome v1.2.
TTTCGAGGGATTTAGAAAATATAAAGTATAAACCCATTGAGGAGGAAGAACAAAACCAGAAACTTGGATTGGGTTGGCTT CATCGGTGAATCTCTCCCTCTCTCATATTAGGGGTTTACCTCGCTTCTTCTTCTTCTTCTTCTTCCATCTAATAACCCGG TATGTATGTAACTGAGATCCAGATTCTTAACAATTCGCACTTATATTCATTCCTTTTCTTCTCATTCTGCATGAACACAC TTGTTCGTAGGGTTTCAGATTTTAATTTATATTTTGGGAATCGTCATTTATTTTATCTGTGCCTTTGTTAACTGATGATT TGTTGCAATGCGGATTGTCTTTTCAATTTAACAATGTTCTATGACGCAGTTTAATTGGGCTGTGTTTATATTCCCACAAT GTTTACTAAGCATCAATAACTGTGTTTATCTAAAAATATGTGTTGTTTCCAGGAGCAGTGACTTGAATTTGTAGAATGGG TGAGACTGGCAAAAGATATCGACCGCGGAGAGACCATGACGGGGGAAGCAAAAATCAGAAGAGGCGTGTGAATAACAAAG ATGAAAGGGGTGATGATGAATTGATTGTGTATAGGATACTCTGTCCGGATGAAGCGATTGGGGGTGTTATTGGTAAGAAG GGAAAAGTGATAAATTCAATAAGGCAAGAGACCAGGGCAAAAGTCCAGGTTGTGGATCCATTTCCTGGTGCCACGTATCG AGTTATAACTATTTATTGCTATGTTAAAGAGAAGGAAGAAATTGAGGTTGATGATGAGCTTAACAACAAGAGGACTCTTT GTGCCGCCCAAGATGCTCTTCTCAAGGTTCATTCTGCAATTTCAAATGCCAAGGAAACTGTAAGGGATTCTGAAAAGAAA CAAAAAGAAAAGGAAGAATGTCAAATCCTTGTTCCATCAAGCCAGTCTGCAAATATCATTGGCAAGGCTGGGGCTACCAT TAAAAGACTGAGAGTTAAGACTAGGACCAATATCAAGGTCATTCCGAAGGATGCAGCTGACCCAGCACACTCATGCGCTA TGGAGTTTGACAATTTTGTGTTGGTTAGTATGTTCAACTTTATCAAATTTATTAACTGGCCATTTAACTACTTATTGCTT AGGTTCACAACATAATCACAACATTTTAAAAACTATGTGGTTGTTAAGACAGTAAGTGAACTTAAGCCTCCTAAGATTAT GCACATATACGATCTATTGTCACCCATGTTTAACGTATATAATGCATAATGTGGGAAACGGATTTTGTTTTTGTTTATCA TAAAGTTTGTGCTCTATTCACTATTATCAGAGGAGATTTTATGATAAAATTGATATTGATGTTACTCATTTAGTCGCTGC AGTTGATGTTGTTGATACACTGTTGTGCATATACATGGCACGATGGCATGAATAGCTGCATGCACAATTATGTGGGCAAT CCTTAGTAGCCACCAATGTTGTGGGTGAATCAATTGTGCATTTGGATGCTGTAGCTATCCTTTTATATAAAAATAATTGC ATATAATTTTTGTTAGCTATATTAATTTGAATGTGAAACTCATTAGCTAAGCATCTAGATAGAAAATTTTAAATTTTAAA TTTTCTAGTTTTTGGTAATTTATTTTTACTCTTTTTTTTCCAGTTACTCAACCATTTCTTTTGCAGTGAACTTCTTGCTT ACTATATGCTTGTTTCTGTGAGTAGATTACCGGTGAATCAGAAGCGGTAAAAAGAGCATTATTTGCAGTTTCAACTATTA TGTACAAGTTCTCCCCCAAGGAGGACATTCCTCTTGACACAACTGTACCAGAAATCCCTCCCAGTATTATCTTTCCTTCT GAAGTTCCAATGTATCCATCTGGTGGACTATATCCAGCTACAAATGTACATGATCTGCAAGGTTATTCAGATGCAGGAGG AAATACACCGTCTCTTTATTCATCCAGTTTTCCAATAGTTTCCAGTCTTGGTGCTTCTCAATCTGAAGAATTAATTGTAA GAATGGTATGTCCCTCTTACAAGATTGGACGTGTCATTGGGAAGGGAGGAGGTACCATTAAAAGTGTGAGGCAGGCAAGC GGTGCTCGTATTGAGGTTGACGATTCCAAGGCTTATGATGAGTGCTTAATCACTATAACTTCAACAGAGGTGCACTATCT ATGCTTCTTCCATTTGTTTCTGTAGGATATAATTACATTCCTAATCATTCTGGTTGTGGGACTAGGTTAACTGTGGAGTA CTGGAGTCTTGGATATATCAATTGATGTAGAATAGCTGATATGTCAAGAATTTTTTTTTAGGGGCGGGAATTAGCATACT TAATTGTTAAGCTTTAATTATATGTATTTGCATTGAAGTTTGACTTTTAGTTTGATGGCTAATTTCTGCATTTTCTTCTT CCTATAACTAATCAAGTATTTTCTAGACAAACTATGGTAGATATGTTTCATTTTTTGTTGCGTTTAGATATTGATTTATC TTATGTATTTCTTGGCTGGATGCCTGGATTACTATTTACTAGTTTGCTATACACTCTCTTGTTCTATTTTCAAAAACAAG GCCTCGTTTTTTTGAGTGATGCATTTTCAGGCATATCTTCCAAGTTCCATTAAAATTTAAAGTAGGTCAAGTCCATATTG GAGGAAATCTTTTTATAGTTAATACTAACTCAATATTTTGGTGAATTGTGGTGAAATGGTTTATATTTTCATGCTAGGCA GCAGGTAATTTCGTGGCTTCATTTATAATAATGGTTGATCTAACGGTGTACAAGGAGATAAGCATGGTCACTGGTGCCTT ATGCTTGGTTAACTTGAATGCTTCTTCAAATCTTTGTATTTCATGAACAGTTTTATGCCTGGTTTTCTAGTCAGTGGATT TTGTTGACTCCCATGTTGTCCATACTCCATACTGTGCATGTAGCCTTATCCTAGTTTGTGTATTACTATTGACCATGTGC TGTTATTTTTTCATAATTTTTTTAATCATTGTGTTATTTTTGTAGTCATCAAGTGATCTGAAATCCATAGCTGTTGAAGC TGTTCTACTGTTGCAAGAGAAGATAAATGATGAAGATGATACCACAGTTTCAATCCGACTCCTGGTACCATCCAAAGTGA TAGGCTGTATTATAGGGAAAGGTGGTTCAATCATAAATGAAATTCGGAAGAGAACTAGGGCTGATGTTCAAATCTCAAGA AATGATAAACCTAAATGTGGAGACGTGAATGATGAATTGATTGAGGTTTGAATTATTTTTGCTTTAACTGTTTCTTGTTT TATTTGTGACATTAATTTTATTCAATGCTATCTTGCATTCACAATTTAGGTAGTTGGAGAAGTTGATTCTGTGAGAGATG CACTCATCCAGATTGTCTTAAGACTGAGAGAGGATGTATTGAAAGAACGGGACATTGGACACTATCCCCCTAGAGGTGCT GAATCCTATTATTCAGAAAGTTCTGTTCTTTCGGTGCCATCTTTGCTGCCTTCAGTTCCTTCTGTTACTGCTCCTCTAGC TTATGATCAGAGGCCTGATAGTAGAACTGGTCTGGGCATGCTTTCTTCCAACAGCCTTTATGGATATGGATCTTATTCGG TATGTCTCCCTGCTTTTTTTTTTTTTCTTCCAACAACCTTTATGGATATGGATATGGAACTTTTTTTTAATCGCACGTCA CTGATTTTTTTTATTGTTTGCTCTCTGTAAATAGATGGGAGAAAGTGGCTATGGATCAATGCAATCATATGCCTCCAAGT TGTATGAAGGGTTAGTATGTATTGTCATCAAAGTCATATGCCTTCTGAACTTTATAACTAACCTGATCTCTTTTTCCTTG ACTTTATGTTAGACTGGTCAGTTATTTTCAACTAAATTTCCTGTGCTTTTATTGTATACAGTCTGCCTCCCCTGTCAACA TTGGAGATGTTGGTTCCTGCTAATGCAGTTAGTAAAGTGTTGGGTAAAGGAGGGACAAATATAGCCAATATAAGGAAGGT TGGTACCCACGTTCTAATTTTGACAAACATACACAATTTTCTGCAAATGCTACTGTTATTTACAGGAGTGAACTTTCAAA AACAGCTGACAGTGATATCTGGAAAGAAATACAAGTATGAAAAAAAAAAACCAATAAGCTGTATAAGAATTCTCTCAATT AGCAGGACTGGGCCCAAGCTAAAGCAGTTAAATACATTAACAATGACTTTTCTGCCCTCTCTTCCCCTTCACCCCTCTAT GACCGATTCTCTTCTTTCACCATTTCTGTAACTAACTCCTCTCCTCCAGGTCTGTTACTGAATCCTCTCTCCACCTCCAC ATTCTCACTCACATATCCCTTTCTTCCTTCTCTTGTAAACCTCCCAAATTTTAGGCCCATTACCTTGGTTTACCAATTGA ACATCCCAATCAAAACAATTCTTCGTTACTCAAGGCATATTTCTATTGTTTACCTTAAATCAATGCCAGATTTGGTCAAG TTTAATCCTTAGCGTTGATATTTTTTTATTGCTCAGTTAGTTACTGTGTGATATGATGCATAGTCCAGTTACGGTTTTCT CATTTTCGATCAGTGATTTTTTCAGTTTTCCACGTTTTGACAGACCATTGTGGTTTCTTTCAGATGTCATCTAATGACAT CTATCCATGCAAACTATTTTCTAAAACACACACACATGCACACACCGACTTACAACAACCAAAACCTTTTCCCAATTGGT GAAGTCCGCTGTATGGATTAAATGATGCCATAATATCCTATGTGCCTGTGTGTGTAATGGATGTCAATGAATATGTATCA GCCATACTCAAGTTTATACCTCTGTGTCTTAGCGTGAAATACCAGTTTTTCCATACCCGTTACACTTATACTTAAGATTT GCTTTATTGGAATGTCTATTTTATGTCTATTTGTTTCAATCCAGATTTCAGGAGCAACAGTAGAGATTTCTGACTCCAAA TCTGGTCGGGGTGATCGTATTGCTCTTATTTCTGGCACACCTGAACAAAAGCGTGCAGCTGAAAACTTGATCCAGGCATT CATAATGGCTACATAAGTTTTTGTAGTTATTTCTTGGGTGGGAGGGGGTTTTGAAGGTGAAAATCTAATTCTCAATGCAT GTCATGTTCCGCTTCTTACTCCCTCTTTGTTGGTCGTGGAGTGATACTCTAGAGCTCTTTGTCTGGACTCCTGCCTCCTC TCTGTAACAGTGACTACCAAGATTATGCCTTAGCATCCGTTACTGGTCTTGTTTGTAGGAGCTATAGTTCCTAATCTACT CTTCATCTGCATTTTCTCTTAGAAATTTAGGATCTTTCTGTCCATTCATACTGTTTTTTCATTGACTGGTGTTAAATCAT CTTTATCTTGGTAAATTATTATCAGAAGACCATAAAGTGGTGCTGTTTTTTTTTGTTTCTACTGGTTCAACCTTTTATTC TCATGTCTTGCTGAAAATATCTTCCCTAATGATGCAAATAAAATTCAAATTCTCTAGTGATCTCATCTTTCTAATATCCT TGATTTGCAACAACGTTTTGGTCAAAAGTGAAGTTGCCTCATGAAATTGAGAAGTTCCAGAAAACACTGGATCAGTTCCC TCCCTCTAGCTATTTACCATGTCTTGAAATCCAGTTGCAACTGGGGGTATTTAAAGCAAAACATGACCATTATTTACTGT TTGATTTCAACGCTTCTGGTTGCTTGTTATCTCCTGAAGTGTACTTCATTATATACCTATAATCTCATTAATCGTATAAT TTGTAGAACTCGTGTTCTTGCTTTTCACTTCAATTGTCTTGCAATGGATGCCATTCACAAGGAAATGTTATCTTCTGCAT TTTATTGTAGCAAGCCTTCCCCTCTTCCATGTGGTTTGAAATTATTTCATTTGGACCTCCCAAATTCCATCAATTTTAGG GTCTCTATCTCTGCTACCTGTCGCATATCTACTCTGTTGTTCTATTCGCAATTTAACATTTAGTATTTCAACTGAAGTTT GGTTATAATTAATTGAATTTTGGTTACCAAGATATAACACTGCTCTAATGTTGGTGGGTTTTCCTCAAATGAAAATTAAA TTTTCCTAGAATTTAGGTCTGACCTAACTCTATCCCAAAAGTTAGTGTTAGGGTGGGCATTGCCCTACTATTTATAAGGA CTTCTTTGGTCATATCTCTAGTCGATGTTGGAGTACACCCTTCTTACGCCCAAAGGTGCCAGAGCGTGAAGTTTGCATGT ATTTGCTGGTGGTCCATTTATGAGTGACCCGATACCAAATTTAGTATAGACTCTGAAAATATATTAGAGTTTGGGTTATG TCTAAGTGAAGATTACCTTACTATTTCTAAGGACTTCTTTAGTCATATCTCATCAATATGTGACCTTAACACTGTTTTGT ATCTCTCAACAGAACAAACCCTTTTCAATATTCTTAAAAAATCCCACTATATTGTTATAACTGTAACATAAAACGTAGGT ATGTGAGTCCAGGTGAAACATATAAAATCATTTGTGTCTTCAATTAACAGCTTAAGTTTTTTGGATAGTTGGTTTATAAC ATAGTTTTAGAGTCTCTGACCAAGTGGTCTAGAGTTTGATGGTGGTCTGTGCATTGTCCACGTTTCAAGAACAATGGGGG TAAGGGGTCATGTTAGATATATAAAACCATTCATGTGTTTTGACCCAACAACTTAAGCCTTTGGGAATTGAGATAGTTAG TCAATAACAAATTTGTTGGTAATTACCTGTTTCCTATCCACAAGGCAGCTACTTTTGAGATTTTTTTACGAATGTGACTA ATCACTGGTTGCTATAAGCTAATTCATCCTATTTTATCAACATTTTGCATCATATATGTACTCCTATCGTTTTTAGAAAA ATCATCCAGTTTGCCCGTTGTCATGTTTTTAACACCAACATGACAGCACGAATTTGCTCGAAGCTTCCTTTACCTTACAA TATGTGACACTGAACTCTTCAACTTTCTTTCTTTTATGAGCTATCAAATAGATAATTTCAGGTATAATGTTGAAGTTTTG CGTTTCCTTGCTAATGTGCTAGTCATCTAGTCTCTAAGACGCTGTTTTGAGTTTGCAAGTCTCCCTAGAGTTTCATCTCA GCATAACCATGCTTGGTTTAGTGTTTTTAATCTTTTAAAGGATCTATAATATACGAGGATAAACCCTTCCTATGATCTTG GTTATTATAGATTTTCTAACTGCTCAACACAATGTCTCATTTTTTGTTCCGCATTAGAAACCATTCTTTGATTATTTTCC CATCATTCTGAGTAAGGATGTCTAGTTTTAGTTTGGTCGTAGGATCCTTAGGCAGCCATTGCCTTGGAGATGATTCTGTC CACTGTTTCAATGTGAAGTTATCAGAAGTCTTGTTAGCTATTACTTATTTGCATATGAATTAGCTTTTCTGTGGCACATA ATTAATGTAGTGGAAGGAGATTCCTATTGTACGTACAGTAGTTCTTCATTCTTTTAATTTATACGAGAAAATTGCAATAC TGCTTGCATGTCTATTATATGTCTCTATTTTACATCCCCTTTGAATAACTGGGTTCCATTTTGCTTAGGGTTGTTTTGGA TAACAAATATTAATTTTGAAACATTTCTTTTTCAATAGATGGAGAGGTATTATTATTTTCGATACATATTCCCTTCCAAT ATTTTTTTAACTAAAGACGGAATATAAGGATATGTAGAGTCTAGAGAAGTGGAATTCCAGCGTAGAATGCAAATAGTGTA GACTTGACTTGAGTATTAGAGATGTTTTTCTCAAGCAAAGGAAGACCACATATTTGACGGATCAAATAAATATTAAAATT GGAACATTAAAATAGAGATAATGTTTATCCGTTATCCTGGTCAACAAGGTTTATCCTGTATTATCAGTCTAAATTGGAAT ACATATATTTCTTTGCTTTTTTGAGCATAATTGGGGCACACATAATATAAGAATGCCTTTTTTTAATGTCAATTTGCAAT CCATAAAGGACCTGGACCACGGTCCGACCAGCAATCATAAGGTAGCAGCTTGTTATCATAAAAGTGTATTGAGTGCAATT TTTTATGATTGCTCAAACATTGTAATCACAGAAATTAATATCTAGCTATAGGCACTTGCCCTTCGATTGAAACATAAATT TCTCCTCCACTATTGTTTGTATCACCATGATTCCACTTGTTTACATGTATTAAACTCTCTTTAATCGTTACTCACAAGAC TACCCATGGAAAACTGTTGGTGCCACCAATTTGGTGTGGTCCCGTTTGATAGTGGATGTACGATATTTTAAAGTCCAAAA TTGCTTTTCATTTTTGAAATAGTTTGAATTTGGTGAGGAGAAACGTTCCTATAATATATTTCAGAAGTTTTTCATTTTTT AGAAAGAAAACTAAAATTTCAGTCTTGAAGATTTTTCTTTTCTCACTAAGTGTGTCTAATTATCAATGTTTTAATTTAAA AATCGTTTTTCCCCTTAAAAATAACAAGCTATCTGAATTAAGTTTAGCTGGCTTTAGAATTTATCGCCCACCATATACAG TTGTATTCTACTTCTTTCAATATTATGAATTTCAAAATAGTGTAATCATGAATTCATGATAATGTATATAGAGAACATCG ATCAACAATAGTGACAAAGTTCAAGAGAGCAAAGGGGTGGTAAAACCTAAAAAAGTATATATAATGTCCTAAGTTAGTCG TAATCTCTTGTTAACTTTATTTTTTTGACACTTGAAAAAATAAGTTCTCTAAGGATAATTCAATTGGTAAAAGTTGAAGG ACATGCAGATGCAAGGATAACACTTAGAAGACAAAACTTGAAAATCTGTGATATATGAAAAGAGAGGTATTGTCATGCAA TCTTTCTCGATATCTCTTGTCAGCATTTGAACCTAGTCCTTTATGGTATTGTCGATACAACAACCATGTCGACCAAAGAT GCTAACAGTCTCTTGTTATATTTGATGATAGAGATACTTTTTTTCTTTCAGTCTATTACCCACGAGCTTGTTTTGAGGTT ATTTTTTAAGTATAACAAATGGGGCGTTGCTCCGGTACCCATTTAAAATATGAGAGTTAGATATATACCTTTTACTTTAA TTAAATTTTAGAATATAAAGGACTGGATTGTAAATTATAAAAGAAATTATAGTAGAAAACACGATAAATTAAGGCAAAAA GTATAACCTCCTCATTTTTAGACGAGTACAAGAGAAATTGCTTACGAAGAAATGGATTCAATGAAAGAATAAATCAAATA ACCTTTACTTTTTTTTTTGTCTTAATCAAATAACCATTTAAGTTATCTACTTCCTAGCTTCTGATTTAGCTAAGATTTCC TATATCCATGCATATGACTACTTTGTTAACGTATCATGTGAGTCATGACAACTTTGCTAACAAACATGTCTGTAATATTT TTATATTATAGTTCAAATGATGTAGACTTGTGAGTTGTGAAACTGGTGATGCTATTATACAAATTCAAGCTTAAACTTGC TTGAGACTCAAAGCAGAACGCTTAATCCGGCCTAAAAGCATATACATCATCAGCTAATTTAAATAGACCACTCAGCTAAT ACATTTTTTTCTGGTCAATAACTCAGCTAACTACCTGTAAAAATCACCCAAGGTTTGTGGATGTGGGAAAAACAAAGTAG CTAGTACAGCCTATGACGCAACAAGCAATTCTTGCTTGGACATTAATGTAGAGCTCTAGATACAATTAATTGAAAATTAT GACTTTATTAAAGTAATTATAATAACGATATAAGTTTCAAAAAAAAAATTATAATAACGATATAAAATTTGTG
CDS sequence (LotjaGi6g1v0311200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGAGACTGGCAAAAGATATCGACCGCGGAGAGACCATGACGGGGGAAGCAAAAATCAGAAGAGGCGTGTGAATAA CAAAGATGAAAGGGGTGATGATGAATTGATTGTGTATAGGATACTCTGTCCGGATGAAGCGATTGGGGGTGTTATTGGTA AGAAGGGAAAAGTGATAAATTCAATAAGGCAAGAGACCAGGGCAAAAGTCCAGGTTGTGGATCCATTTCCTGGTGCCACG TATCGAGTTATAACTATTTATTGCTATGTTAAAGAGAAGGAAGAAATTGAGGTTGATGATGAGCTTAACAACAAGAGGAC TCTTTGTGCCGCCCAAGATGCTCTTCTCAAGGTTCATTCTGCAATTTCAAATGCCAAGGAAACTGTAAGGGATTCTGAAA AGAAACAAAAAGAAAAGGAAGAATGTCAAATCCTTGTTCCATCAAGCCAGTCTGCAAATATCATTGGCAAGGCTGGGGCT ACCATTAAAAGACTGAGAGTTAAGACTAGGACCAATATCAAGGTCATTCCGAAGGATGCAGCTGACCCAGCACACTCATG CGCTATGGAGTTTGACAATTTTGTGTTGATTACCGGTGAATCAGAAGCGGTAAAAAGAGCATTATTTGCAGTTTCAACTA TTATGTACAAGTTCTCCCCCAAGGAGGACATTCCTCTTGACACAACTGTACCAGAAATCCCTCCCAGTATTATCTTTCCT TCTGAAGTTCCAATGTATCCATCTGGTGGACTATATCCAGCTACAAATGTACATGATCTGCAAGGTTATTCAGATGCAGG AGGAAATACACCGTCTCTTTATTCATCCAGTTTTCCAATAGTTTCCAGTCTTGGTGCTTCTCAATCTGAAGAATTAATTG TAAGAATGGTATGTCCCTCTTACAAGATTGGACGTGTCATTGGGAAGGGAGGAGGTACCATTAAAAGTGTGAGGCAGGCA AGCGGTGCTCGTATTGAGGTTGACGATTCCAAGGCTTATGATGAGTGCTTAATCACTATAACTTCAACAGAGTCATCAAG TGATCTGAAATCCATAGCTGTTGAAGCTGTTCTACTGTTGCAAGAGAAGATAAATGATGAAGATGATACCACAGTTTCAA TCCGACTCCTGGTACCATCCAAAGTGATAGGCTGTATTATAGGGAAAGGTGGTTCAATCATAAATGAAATTCGGAAGAGA ACTAGGGCTGATGTTCAAATCTCAAGAAATGATAAACCTAAATGTGGAGACGTGAATGATGAATTGATTGAGGTAGTTGG AGAAGTTGATTCTGTGAGAGATGCACTCATCCAGATTGTCTTAAGACTGAGAGAGGATGTATTGAAAGAACGGGACATTG GACACTATCCCCCTAGAGGTGCTGAATCCTATTATTCAGAAAGTTCTGTTCTTTCGGTGCCATCTTTGCTGCCTTCAGTT CCTTCTGTTACTGCTCCTCTAGCTTATGATCAGAGGCCTGATAGTAGAACTGGTCTGGGCATGCTTTCTTCCAACAGCCT TTATGGATATGGATCTTATTCGATGGGAGAAAGTGGCTATGGATCAATGCAATCATATGCCTCCAAGTTGTATGAAGGTC TGCCTCCCCTGTCAACATTGGAGATGTTGGTTCCTGCTAATGCAGTTAGTAAAGTGTTGGGTAAAGGAGGGACAAATATA GCCAATATAAGGAAGATTTCAGGAGCAACAGTAGAGATTTCTGACTCCAAATCTGGTCGGGGTGATCGTATTGCTCTTAT TTCTGGCACACCTGAACAAAAGCGTGCAGCTGAAAACTTGATCCAGGCATTCATAATGGCTACATAA
Protein sequence (LotjaGi6g1v0311200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGETGKRYRPRRDHDGGSKNQKRRVNNKDERGDDELIVYRILCPDEAIGGVIGKKGKVINSIRQETRAKVQVVDPFPGAT YRVITIYCYVKEKEEIEVDDELNNKRTLCAAQDALLKVHSAISNAKETVRDSEKKQKEKEECQILVPSSQSANIIGKAGA TIKRLRVKTRTNIKVIPKDAADPAHSCAMEFDNFVLITGESEAVKRALFAVSTIMYKFSPKEDIPLDTTVPEIPPSIIFP SEVPMYPSGGLYPATNVHDLQGYSDAGGNTPSLYSSSFPIVSSLGASQSEELIVRMVCPSYKIGRVIGKGGGTIKSVRQA SGARIEVDDSKAYDECLITITSTESSSDLKSIAVEAVLLLQEKINDEDDTTVSIRLLVPSKVIGCIIGKGGSIINEIRKR TRADVQISRNDKPKCGDVNDELIEVVGEVDSVRDALIQIVLRLREDVLKERDIGHYPPRGAESYYSESSVLSVPSLLPSV PSVTAPLAYDQRPDSRTGLGMLSSNSLYGYGSYSMGESGYGSMQSYASKLYEGLPPLSTLEMLVPANAVSKVLGKGGTNI ANIRKISGATVEISDSKSGRGDRIALISGTPEQKRAAENLIQAFIMAT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | - | – | |
| PANTHER | 3 | 600 | 598 | 4.6E-259 | – | |
| PANTHER | 3 | 600 | 598 | 4.6E-259 | – | |
| Gene3D | 33 | 96 | 64 | 1.3E-13 | ||
| SUPERFAMILY | 33 | 89 | 57 | 9.3E-13 | ||
| SMART | 35 | 106 | 72 | 1.7E-8 | ||
| ProSiteProfiles | 36 | 86 | 51 | 11.364 | – | |
| CDD | 38 | 86 | 49 | 5.21406E-14 | – | |
| Pfam | 39 | 88 | 50 | 4.5E-11 | ||
| SMART | 138 | 216 | 79 | 2.4E-10 | ||
| Gene3D | 138 | 216 | 79 | 1.6E-13 | ||
| SUPERFAMILY | 138 | 219 | 82 | 3.36E-11 | ||
| ProSiteProfiles | 139 | 211 | 73 | 14.131 | – | |
| Pfam | 142 | 211 | 70 | 3.2E-12 | ||
| CDD | 142 | 212 | 71 | 1.23799E-11 | – | |
| SMART | 290 | 362 | 73 | 2.9E-10 | ||
| Gene3D | 291 | 370 | 80 | 1.8E-13 | ||
| ProSiteProfiles | 291 | 357 | 67 | 13.879 | – | |
| SUPERFAMILY | 292 | 368 | 77 | 3.0E-12 | ||
| CDD | 294 | 346 | 53 | 1.17499E-12 | – | |
| Pfam | 294 | 345 | 52 | 1.8E-11 | ||
| SUPERFAMILY | 365 | 455 | 91 | 1.9E-17 | ||
| SMART | 370 | 444 | 75 | 5.9E-13 | ||
| Gene3D | 371 | 445 | 75 | 2.3E-19 | ||
| ProSiteProfiles | 371 | 439 | 69 | 16.982 | – | |
| CDD | 373 | 440 | 68 | 5.1143E-21 | – | |
| Pfam | 374 | 439 | 66 | 1.2E-13 | ||
| SUPERFAMILY | 530 | 605 | 76 | 5.41E-16 | ||
| SMART | 536 | 606 | 71 | 8.9E-13 | ||
| ProSiteProfiles | 537 | 601 | 65 | 16.458 | – | |
| Gene3D | 537 | 608 | 72 | 8.6E-18 | ||
| Pfam | 539 | 602 | 64 | 8.6E-14 | ||
| CDD | 539 | 602 | 64 | 5.65311E-15 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Expression pattern of LotjaGi6g1v0311200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…