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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0325700 |
| Transcript ID | LotjaGi6g1v0325700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent RNA helicase, putative; TAIR: AT4G18465.1 RNA helicase family protein; Swiss-Prot: sp|F4JRJ6|DEAH9_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9; TrEMBL-Plants: tr|A0A151QUU8|A0A151QUU8_CAJCA Putative ATP-dependent RNA helicase DHX35; Found in the gene: LotjaGi6g1v0325700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:64098197..64106980) extracted from Lotus japonicus Gifu genome v1.2.
GGTAATTTGGGCCTTGCGCTGCGACTAGTTTTGACGGGTAGCTCCGTTTGGGTGAAGACGAAGTGTGTGTGACGATGCAG TTCTGGAAGCCAGGGACGGAGAAGCCGGAGGCTCGGGTGGTCGACGACGGAGAAGGCGGTGTTCTATTCATCCCCGGTCC CAATTCTCTCTCTTCTTCCTCTTCTTCTGGATATGGATACGCCTCCATCGAGAAACAACGGCTGCGATTGCCTGTCTACA AGTACCGCACTGCCATTCTCTACCTCGTCGAGACTCACGCCACCACCATCATCGTCGGCGAGACTGGCAGTGGCAAAACC ACTCAAATCCCTCAGGTTACTTCTCCTTCTCCTTCTCCTTCTCTCTCTATCTTTACATCCTCCAATTTGCTCCAAATTCA ACTGACATACTCTGTTCTGAACTTCACTGCAGTTCCTGAAGGAAGCAGGTTGGGCTTCCGGTGGCCGCCTCATTGCGTGT ACTCAACCTCGACGACTAGCTGTTCAGGTTTGCTCACTTCTTCATCCTTCATTTTATAGTATAAAACCAGCCATGTGTTC TTTACCAATAGCTTAATTTTTGTTGATAATTAGTTCATGACATAGTATGTGATCAAAGGGTCTAGAATTCTACTGGTTTC CCTAATCAAAAACCGTCAAAAATTGGATGAAAGTTGATAACTGCAACGTGAGCGACATTGTAGGCTAATGAATTCCTTGA GGGACCAGAACTGTCAAATCGTGATAAGTGAGAGACCAAAAATGCTATTAAGCCTTACTCTAATAAAAGGATGATTTAGG TGCATTGTCCATGCTTTAAGACATATGAGGAATGCAAAACTATTTTTGTGTTTTTTACCCAATAGCTTGATATAATATAA GGTAGATGGTTCATGACACTCTTTATTCATTCATCAATCATGATGCTGTTTCATCTTAACTTTTCAAGTTTCTTTCATAG GCTGTTGCTTCCAGAGTTGCCCAAGAGATGGGTGTCCAGCTCGGTGATGAAGTTGGCTACACCATTAGGTTTGAAGATCT TACCAAACCTGTGAGTCATATCACCATCTCTCTATATCTTACTTTATCAGACACACTTATATGTATATATTTAGTGACCA CAAACACACACAATTTAAGGGGGGGAAATGGAAGAAGATTGGTTGCTTAATCATGAATGTTTAGGACATTTTTTTGGTTT TTCGACAGAACAGGATGTGACGGTGATTAAATTTTTGACTGACGGGGTGCTCCTGAGGGAGATGATGGCTGATCCCCTCT TGACCAAATACAGGTACTACTTCAAATTTCATATGTTTTTGTGGTTGTGTGATGTAGCAAGGAACTTATATCTGTTTCAA TGAAAGAGATGCTATTCCATTTTCCTGTCCGGGACTCCTTTCACCACCTCATTCACTTGTTTGCAGTGTTATAATGGTGG ATGAAGCTCATGAAAGGTCGATTTCAACTGACATTTTGCTTGGACTATTGAAAAAGGTATTGAAGGGATGGACAGGACTA GCCATATATATAGGAACAAATTGATCTCTTATATTTTGCTAATTAGTTAATGGTGTCTTTATTTTCACTTTTTTTATTAT TCTTTTAGTTTATGTAGTTGGCTACTTTTTCAGATTCAACGGCGTCGACCGGAGTTGCGATTGATTATCGCATCTGCCAC TATTGAAGCGAAATCAATGGCAGACTTCTTCCGTACGAGGTTTACTTCCATTCTTGCTATGTTTCAATTGTTTGGTTTTC ATTTTCTTCTTAAAACTATTTTAGAAGCTCTTCTATATATGAAATTTATCTTGATAAAAATGACACTATTGTACCTGGAA AATGACCTAAACTGTAAATATCTGATTTTTAACATTCACTCAGTTCATATTTTGACAGCTACAAAAAGTAATTAGTAAAA GGAAGGGTTTCCCTATCAGCGAGTCCAAAAGGCATTAGTTGTTTGTAATGCTAATGATATATATTGAGTCTTCAGATTTT GATTGTCACCCAAGAATCCTCTCACTTATTTAAATTTTGTGAACAGAAAAAAACGCCGGGAACCTGAAACTGAGGAGCAT GGACTGAAAGTGGAACCTGCAATATTATCAGTTGAGGTACTATTTGGATTTAGTGATTCTCCTATTCTCTAATTGCGTTT GTTTGGAGCAAAACTTGTGCATTTTTTATTTCAAACAAGACTCCCTTTCCCTAAATTTGTTTTTGGATAATGTTAATGTA TCAATTTCTCTACAGTTCTCAGCCCATGGTTATTTCTAGGGTGTGTCTGATTGCGAAAGGACTGGGCTGCTACTGCAGTC CTAGCTTCCTTGTTTATAATAATCTTTCTGTTTTTATCATTTTATTTGGTTTATTTTTTCTCCTCTAGTTAGTATTAATA ATATTAGTGTTCCAAAAGGAAAACCTGAATTTTCAGAAACTACATCATAATTCGGAGATATATCACGTAAGTGAGCTTGT TATTTCCAGGTTAAAGTTTTCAATTTTCAAAAAATGTGTGCTTTATGATTTCCAGGGAAGAGGCTTCAATGTTCAAATTA ATTATGCTGAGGAACCAGTCCAAGACTATGTTCAGGCTGCTGTGTCAACAGTACTCTTGATCCATGAGCGGGTAAGTCAA CTAATTCATTCTGTTTTTTTGAGGCATTTAATTCAATGTAATTAGTAATTACACATGTTGTTCTATGGGCCTGCAATAGG CTTGACTTGATCATGGACACCAAATATGAGTATGCATTTTGGTCCACCCCGAGAATTATTAGGCTCTCCCCAGAAAAGCT AACACAAACTAACACTGAACATTCTGCTGTTGGTATAATAAAAAAAAATCAGTTTTTTGTTGGAAGTTTGAAAAAAAAAA ATGGCATGTAATGGTGGTTTGGAAAATCCTATTTATTACGAACTATTCTAACAAAACGCAAGAACAGTTAGAAAATTGGT TCTGTTTTCTTAATCTATCTATCACCCTGGCCCACCATGTTTGATTATAGAAATCTGATTGGACAATTTGAACCTCGTAA AATTTCTTTTTGGTGATAGTCCCGTACTAATTAGGGGTGCTCATGATGATTTTGGTCTGTGCTATCTCCCCTTAGGAGCC ACCTGGAGACATTCTGCTGTTTCTTACTGGCCAAGATGATATTGATGCTGCTGTTCAGTTACTCAATGATCAAAATAATG GAAAACACTCTTCAGGTACACACCCTGGATAGAATTTTATTTTCGTTAAACCTAATGGGAAAAAACTTTCATATTTTGCT CATAATTATGCTTGTCAATCAGACACCAGCATGTGGCTAATTCATTTAACTTTCTTTGTTCCAGGATTGATAATATTGCC TCTGTATTCAGGACTTCCACGTGCTGACCAGGTTAGAAATACATTTGTGGACTTAGTTGTCAAAAGATTGTTTGTATATT TATCTAAATTTAAATTTCTGTATGTAGTGACATTTTTTACTTTCTCGCAGGAGCTAGTGTTTTCCACAATTCCTAGAGGA AAGAGGAAAGTAGTAATTTCTACTAATATAGCAGAAACATCACTCACATTGGAGGTAACCTCTAAGTCTGACTATAGTTA GAGTAGAGGTAACAAAGAACTCCTTATCCATCCTTATTTTTCTAATTGTGCAGGGCATTGTCTATGTTGTTGACAGTGGA TTCTCAAAACAACGGTTCTACAATCCGGTATTTCCATTTTTTTTGTTTCTGTTAAAAATATAATCGTATTGAACCTTTAC TGATTTGTTCTGGCTTTGAAAACATATTTTAATCAATACAACTATATGCCCATTGTTATAGCCTTGACTCTATTTATGCT TCTCTTTGAGGTTCTTTTTCATTTTTATTTTTCATTAACACTATTCCATTATAGAGGAGTTATCCTCACTTTCCACTTAC GTATTTGTATTTTTTATGATAAATTAGAAATGTTCCATTAATTTTTTATGTGTCATATTTAAAAAGTTATTTTTTGGTTC AAAAGTTCTGTAAAACTCTGAATAATGTTCATTCTTATTTTCTGTTATTCAATTTATGAAACGTATCCATTAAATTTTGA TTTACTCTACCTGCCATGCTGGTAATTTAATTTAAAGAAGTCTTCTTCCCTTCTCCATTCCTTCTCTTCCTCAGATGTCT TAGTGTTGCAGTGTAATTTTTCCCCTCCTTGTAACAGATTTCAGATATCGAAAATCTTGTTGTGGCACCAATATCTAGGG CTTCTGCTAGGCAAAGAGCTGGTAGGGCTGGACGAGTTCGACCAGGAAAGTGTTACAGGTATCTGACTGAATAATTAGTT GTTTCTTTTAGCCTGTTTGGAAGAATGTTTCACAGTTTCACCTATCAAATATAATTTATTTACCTAGTCTTATTCCTTCA TAGATAATAGATATACATTTGTGTTGACTTGTAAATGGGGACGGAGGGAGTATATTCTGGTTTCTGGTTTATTTGATTTG GTTTAAGGCATCATTTAAAGAGCGGCTCTTTGCCCCTAGATTTTGTTTGGGGTTTATGGTTTCTCTCTGGTTCCCTGCTC ATTGCTGTTTCAATCGGTTTTTAATTTCTGATTTGCACTTGGATTAGGAAGCCTTGATGCATTCTTGATTCTATCTTTTC CCCTGTTTTTTTTCTCTGGTTTTGTAGGATATTTTATCCAGTCTTAACCTTTCTCTCTAATAAATTCTCTTTTGTTGATC CATACATATATAGAGATGGAATCTATTGTGGGAGAGTATGAGAGGAGTTAAAATTGAATTTGTACTTTGTACTGATGTTA ACTATGAGAATCCCTTTCTTATCATTCATTGTGCACATGACTGTAACCAGGCTATATACAGAAGAATATTTTTTAAACCA CATGGCTAATGAGGGAATTCCAGAGATACAGAGGTCAAATCTCGTCTCCTGTGTAATCCAGGTCTGTAATTCTTATGGAC TAATTTCATTGCAACAAAATTTTATGAGCCAAGTTATCTTTTTTTATGGGCGCACTGCCATCATTCATTGTTTCATACTT CTCCAGACTGAGATTATAATTTTTCTGATCAATAGGAATGGTGACTATTGAATAATGATCAGTTGCATCACTCCTTTGCT GATTTATCATGAATTTGTTCGTATTTAATAAATTGTAATTAAGTGTGTCTTCTCTCTTTAAAATAATTTTAAATTAAAAT TTTCAGCATTAATCAGGGGAGAGAGAGACAGACAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTGCTTTTG AAACTTCTCCATTTTTTATTAGTTCATTTCACTAACTCCTTTCTTGCTATGAATTTGAAATGTTTTTTTTAAACCTTCCT GGTCTTGTAAACAGAATTTCTTTTTGAGATAAAATTATTTTTATTACTTCTCTCTGTTGCTAGGGCTAATACCTACTCTT AAGGGGGTTTCCATTTCTAATACGAAGGGGTTGAAGTTGAACAGATTTGTTTCTTTCTTTAGCCTCTGGCCCCTAGTTAT GCATCACTTCTCTGATCTCACTAATAAAATTTATCCTTTTATCTAAAATAAATGGAAAAGCATGTTAGTACTGTGTTAAG TGAGATGAATTGTTTAATTGTCAATGTTCCACCTTTTCTAGTTTGAATGATATCATTCCATTTGAGTGCTGTTAGGAGAG TATTATTTGCTGGAACTGTGTGTTGTGTCTATTTTTGTGTGTGTGAATTCTAGATCAATCTAATTGTTGATCCTAAATTT AATTTCTTGATATATTTTCTGATTATTTTCAGTTAAAGGCTTTGGGGATTGATAATATCTTGGGCTTTGACTGGCCAGCG TCTCCATCTCCTGAAGCAATGATCCGAGCAGTAGAAGTTCTCTACTCACTTGGGGTCATGGATGATGATGCTAAGCTTAC TTCACCTACTGGATTTCAAGTTGCAGAAATTCCACTGGTATATATTAGATACCACTTAAATGATGTTTCATTCATTTGTT AATTCTAGCTTCTAAGTACACCAGAGATATAGCGGATAGAACAAAAGAATAGCTGAACAAAGAAAGTGAAGAGGTGAAAA ATTAAAACGTGGAAGCAATTCTATGTCTTAATTTTTTACTCTACCTTCCAAAGAAAAACTAGGGATCCAGTTGTACAATC TCATGGAGAACCTGCATTCTTTCATTAATGTGGTTGTTTTTCCGTCTCCCCTAAACCTCTAGATTACTTACAGCCATAGA GAAATCAACAGACAATGTTTACTGTTAAGTTTTTGTCATGTCTCCATTTTTAGATGCATTTCTTGCCTTTCCAAAATTAT CTTTCCAGATGCATTACTTACAACTAATGTTTTCTGTATGGAATGTAATTTTTTCCAGGACCCAATGATCTCAAAAATGA TGATAGCTTCCAGCCAACTTGGGTGTTCAGAGGAGATAATCACAATTGCTGCTGTTCTTTCTGTCCAAGTAAAGCTTTTT GCTCTAGTCATGACTAATTTTTTTGGTGGAAAATATCCAATCAATCAGTGATTTGATATCAATTTTCAAGCTGAGGTTCC ATATGAAATGAAATCTATCTGAAAACGTCACAAAAATATTGTTGAACATCAATGTTGTGATTGAGCAGTTGATCTCAATT TTCTAATTATCCATGTATACAGTCTATCTGGATCGCAGGAAGAGGGATACAAAAGGAATCAGATGAAGCGAAATTGAGAT TTGCTGCTGCCGAGGTACTTTAGTGTGTGTAAATTGTAAAGGGTTGGGATCAACTTGCTCCAATAGTAACTATTGCAGAG ATACCCTGTTCAATAACTTTTTATGGAATATGAATTCAACAAATCCAACTCTTGAATTATGTGGTATTAACACGGTGATC ATGTACATTGTATGCGATCTTATAGTTAAATTTGTTGAATTTATATTTCATCTGAAAAGTAATTAATCGGAGTAAGGAGT TACTCTTGGATAAGTTGATCCCTACCCTGTATACATATTTCGTAATTTCACACAACCTCACTCTCACAATATCACTCTCT ATTTACACCCATAGTTTTCTCTACATCATTTTTGTTTTACTTCCAATGTTTCTTCATTTGACAACTCTTCCACTTGTGCA ATACAATTGTTTTGATGTAGCCACGTGATGTATGAACTAGTCTTTTTATTCATTAAATTGGTCCTCTTCTAAAAATTTAT GCAGGGTGACCATGTAACGTTCCTTAATTTATACAAGGGGTTCCATCAGTCTGGTAAATCTTCACAATGGTGTCACAAAA ATTTCGTGAACTATCATGCCATGGTGTGTATGTATTCTGCAATTTTGCACAATAGCATTTCAATTTGTCCCTTTTCACAC TAACTATGTTAAGTTTTGACATGACTGCTTAAATTGCGCAGAAAAAGGTTCTTGAAGTTAGAGAACAACTCAGGAGAATT GCACAGAGGATAGGCTTAGTCTTAAAGTCTTGCGAAAGTGATATACAGGTTGGTTTTCTTTAGAAGTTAGAACCTTACTG GTTTAGTAAAAGCTAGTTTACCAAATACACGCTTGCTGTCTTCTCCTGTTTTATTCTTTTGTTGTATGCCTAAACAGTTG TGTCTGGTAAAGCTCTCCCCTGGTGTAATTATTATTATTATTTATTAATCCTGTCCCATTTTTGGCATTTTACCCTACTA CATGTTTTCACTTTCATCTCCTTGGTTTTAGTTAGTTAGGTGATTTAATTATATCTAAAAATAATAATTTTTCCAGGTGG TGAGAAAAGCAGTTACTGCTGGCTTTTTCGCTAATGCATGCAATCTTGAGGTGAAATACTTATTATATTGACATTCTAAA GATGCCTGATTTGATTTTTCAGTTTCATGTACATCAATTTTTTTGGCAAGCCAAATAATTTCAGTGATATTTTATTTGTT TATGTACCTTCTTAAAAGGCATACAGCCATAATGGGATGTACAAGACATTAAGAGGATCACAAGAAGTTTATATTCACCC ATCGTCGGTGCTATTCAGGTTAGTCATAAAACTGAGTTTGAGAATTTGTTTATCTATTGTGTGCTGGTTTCACTACAATT TCTGCTTTCTGAGAAATCATGTAGTCCCTTCCAGCATCTGAACTTGTGACTTTAAGATAATTTCTTTTTCTTTTTTCTGT CTGTGTGATCACAAGTTATGTTGTTTTTTACAGAGTAAATCCGAAGTGGGTTATATACACTTCTCTTGTATCAACTGATC GACAATACATGCGTAATGTCATGACAATAGATCCATCGTGGCTATTGGAGGCTGCTCCTCACTTCTACCAGCTACAACAA CCGAATCTTCGTCACTAATCACCTTAGGCTTATTAATTGAAAGTCTAAGGCGAAGGGGAAAAAATGCTAACATATCGAGT TTCAGTTCAAGTAAAGCAGATTAACCAGTGGTATGGAGACTGGATAGAAACTCTTAATTACTCTTATGTAAACTGGATAT ACCTTATGCAAGTTAGAATTTTTTCATTCCGTCATGGTCCACAAGGTTAATTTGCTGCTTGCTAGATCCAGGTCTCAATG TTTATATAGATGTTAATTTTTGTCTCACGTTAAAGGAACGAAAAGGTTTGTATGTTCTAAAAATAAAATTACAAACTCTC GACTGTTTTTTCAGATAAACTTTGAAAGCATTTGTCGAGTGGTTCTTTCCTGCCTTTTTAAATTAAAAATTAACATGAAA ATTTTAAGAGCTTTTAAAAAAAAATGGTTTTTCTTTATGTAAGAACTCAGAATCTTTAGTACTC
CDS sequence (LotjaGi6g1v0325700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGTTCTGGAAGCCAGGGACGGAGAAGCCGGAGGCTCGGGTGGTCGACGACGGAGAAGGCGGTGTTCTATTCATCCC CGGTCCCAATTCTCTCTCTTCTTCCTCTTCTTCTGGATATGGATACGCCTCCATCGAGAAACAACGGCTGCGATTGCCTG TCTACAAGTACCGCACTGCCATTCTCTACCTCGTCGAGACTCACGCCACCACCATCATCGTCGGCGAGACTGGCAGTGGC AAAACCACTCAAATCCCTCAGTTCCTGAAGGAAGCAGGTTGGGCTTCCGGTGGCCGCCTCATTGCGTGTACTCAACCTCG ACGACTAGCTGTTCAGGCTGTTGCTTCCAGAGTTGCCCAAGAGATGGGTGTCCAGCTCGGTGATGAAGTTGGCTACACCA TTAGGTTTGAAGATCTTACCAAACCTGATGTGACGGTGATTAAATTTTTGACTGACGGGGTGCTCCTGAGGGAGATGATG GCTGATCCCCTCTTGACCAAATACAGTGTTATAATGGTGGATGAAGCTCATGAAAGGTCGATTTCAACTGACATTTTGCT TGGACTATTGAAAAAGATTCAACGGCGTCGACCGGAGTTGCGATTGATTATCGCATCTGCCACTATTGAAGCGAAATCAA TGGCAGACTTCTTCCGTACGAGAAAAAAACGCCGGGAACCTGAAACTGAGGAGCATGGACTGAAAGTGGAACCTGCAATA TTATCAGTTGAGGGAAGAGGCTTCAATGTTCAAATTAATTATGCTGAGGAACCAGTCCAAGACTATGTTCAGGCTGCTGT GTCAACAGTACTCTTGATCCATGAGCGGGAGCCACCTGGAGACATTCTGCTGTTTCTTACTGGCCAAGATGATATTGATG CTGCTGTTCAGTTACTCAATGATCAAAATAATGGAAAACACTCTTCAGGATTGATAATATTGCCTCTGTATTCAGGACTT CCACGTGCTGACCAGGAGCTAGTGTTTTCCACAATTCCTAGAGGAAAGAGGAAAGTAGTAATTTCTACTAATATAGCAGA AACATCACTCACATTGGAGGGCATTGTCTATGTTGTTGACAGTGGATTCTCAAAACAACGGTTCTACAATCCGATTTCAG ATATCGAAAATCTTGTTGTGGCACCAATATCTAGGGCTTCTGCTAGGCAAAGAGCTGGTAGGGCTGGACGAGTTCGACCA GGAAAGTGTTACAGGCTATATACAGAAGAATATTTTTTAAACCACATGGCTAATGAGGGAATTCCAGAGATACAGAGGTC AAATCTCGTCTCCTGTGTAATCCAGTTAAAGGCTTTGGGGATTGATAATATCTTGGGCTTTGACTGGCCAGCGTCTCCAT CTCCTGAAGCAATGATCCGAGCAGTAGAAGTTCTCTACTCACTTGGGGTCATGGATGATGATGCTAAGCTTACTTCACCT ACTGGATTTCAAGTTGCAGAAATTCCACTGGACCCAATGATCTCAAAAATGATGATAGCTTCCAGCCAACTTGGGTGTTC AGAGGAGATAATCACAATTGCTGCTGTTCTTTCTGTCCAATCTATCTGGATCGCAGGAAGAGGGATACAAAAGGAATCAG ATGAAGCGAAATTGAGATTTGCTGCTGCCGAGGGTGACCATGTAACGTTCCTTAATTTATACAAGGGGTTCCATCAGTCT GGTAAATCTTCACAATGGTGTCACAAAAATTTCGTGAACTATCATGCCATGAAAAAGGTTCTTGAAGTTAGAGAACAACT CAGGAGAATTGCACAGAGGATAGGCTTAGTCTTAAAGTCTTGCGAAAGTGATATACAGGTGGTGAGAAAAGCAGTTACTG CTGGCTTTTTCGCTAATGCATGCAATCTTGAGGCATACAGCCATAATGGGATGTACAAGACATTAAGAGGATCACAAGAA GTTTATATTCACCCATCGTCGGTGCTATTCAGAGTAAATCCGAAGTGGGTTATATACACTTCTCTTGTATCAACTGATCG ACAATACATGCGTAATGTCATGACAATAGATCCATCGTGGCTATTGGAGGCTGCTCCTCACTTCTACCAGCTACAACAAC CGAATCTTCGTCACTAA
Protein sequence (LotjaGi6g1v0325700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQFWKPGTEKPEARVVDDGEGGVLFIPGPNSLSSSSSSGYGYASIEKQRLRLPVYKYRTAILYLVETHATTIIVGETGSG KTTQIPQFLKEAGWASGGRLIACTQPRRLAVQAVASRVAQEMGVQLGDEVGYTIRFEDLTKPDVTVIKFLTDGVLLREMM ADPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRRRPELRLIIASATIEAKSMADFFRTRKKRREPETEEHGLKVEPAI LSVEGRGFNVQINYAEEPVQDYVQAAVSTVLLIHEREPPGDILLFLTGQDDIDAAVQLLNDQNNGKHSSGLIILPLYSGL PRADQELVFSTIPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISRASARQRAGRAGRVRP GKCYRLYTEEYFLNHMANEGIPEIQRSNLVSCVIQLKALGIDNILGFDWPASPSPEAMIRAVEVLYSLGVMDDDAKLTSP TGFQVAEIPLDPMISKMMIASSQLGCSEEIITIAAVLSVQSIWIAGRGIQKESDEAKLRFAAAEGDHVTFLNLYKGFHQS GKSSQWCHKNFVNYHAMKKVLEVREQLRRIAQRIGLVLKSCESDIQVVRKAVTAGFFANACNLEAYSHNGMYKTLRGSQE VYIHPSSVLFRVNPKWVIYTSLVSTDRQYMRNVMTIDPSWLLEAAPHFYQLQQPNLRH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 23 | 575 | 553 | 2.48E-107 | ||
| Gene3D | 30 | 233 | 204 | 3.7E-78 | – | |
| PANTHER | 39 | 689 | 651 | 2.5E-267 | – | |
| PANTHER | 39 | 689 | 651 | 2.5E-267 | – | |
| SMART | 50 | 237 | 188 | 7.6E-23 | ||
| CDD | 52 | 243 | 192 | 1.13126E-106 | – | |
| ProSiteProfiles | 62 | 227 | 166 | 18.752 | ||
| SMART | 67 | 228 | 162 | 0.0083 | ||
| ProSitePatterns | 169 | 178 | 10 | - | ||
| Gene3D | 247 | 420 | 174 | 1.3E-66 | – | |
| CDD | 248 | 407 | 160 | 1.65619E-76 | – | |
| ProSiteProfiles | 266 | 440 | 175 | 16.27 | ||
| Pfam | 272 | 398 | 127 | 1.1E-14 | ||
| SMART | 293 | 399 | 107 | 1.8E-17 | ||
| Gene3D | 445 | 549 | 105 | 1.4E-24 | – | |
| SMART | 460 | 551 | 92 | 5.4E-27 | ||
| Pfam | 461 | 547 | 87 | 1.4E-16 | ||
| Pfam | 608 | 687 | 80 | 1.8E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix. |
Expression pattern of LotjaGi6g1v0325700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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