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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0333700 |
| Transcript ID | LotjaGi6g1v0333700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acetolactate synthase; TAIR: AT3G48560.1 chlorsulfuron/imidazolinone resistant 1; Swiss-Prot: sp|P09114|ILVB2_TOBAC Acetolactate synthase 2, chloroplastic; TrEMBL-Plants: tr|D2DJQ3|D2DJQ3_SOYBN Acetolactate synthase; Found in the gene: LotjaGi6g1v0333700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:64839012..64841002) extracted from Lotus japonicus Gifu genome v1.2.
GTCTGTGCCTGCAACTCGAAATGGCGGCGGCTCCAGCTGCAAAACTCGCGTTCACCACCGTGCCTTCACCGTCTTCACGT CCCCAGAATCACGTTCTCAAATTCACCATCCCATTTCCCTCATACCCAAACAACTCCTCTCCTCATTCCCGATGCCGTTC TCTTCAAATCTCCGCTTCCCTCTCAAATCCCACCCCCACCGCCGCCTCAGCCTCCACCGCCGTCGCAACTGAAAATTTCA CCTCCCGATTTTCCCTCGACGAGCCCCGCAAGGGTGCTGACATCCTCGTCGAAGCCTTAGAGCGCCAAGGCGTGACAGAT GTATTCGCCTACCCCGGCGGCGCGTCGATGGAGATCCACCAGGCCCTGACACGCTCCTCCACCATCCGCAACGTCCTCCC CCGCCATGAGCAGGGTGGAATCTTCGCCGCCGAAGGCTACGCTCGCTCCTCCGGCCTTCCTGGTGTCTGCATCGCCACCT CCGGCCCCGGCGCCACCAACCTCGTCAGTGGCCTCGCCGATGCCTTGCTTGACAGCGTCCCCCTCATCGCCATCACCGGC CAAGTCCCCCGCCGCATGATCGGCACCGATGCTTTTCAGGAAACCCCCATCGTCGAGGTAACACGTTCCATCACCAAGCA CAATTACCTTGTTCTAGATATAGATGATATCCCTAGGATTGTGAATGAGGCTTTCTTCTTAGCAACTTCAGGTAGACCTG GTCCTGTGTTGATTGATATACCTAAAGATATTCAGCAACAGCTTGCTGTTCCAAATTGGGATCAACCTATTAAGCTACCT GGGTATATGGCTAGGTTACCTAGGTCACCCTCTGATGCACTCTTAGAGCAGGTTGTGAGGTTGCTTTTGGAATGTAAGAA ACCTGTTCTCTATGCTGGGGGTGGTAGTTTGAATTCTAGTGAGGAATTGAGGCGTTTCGTTGAGCTTACCGGGGTTCCTG TTGCTAGTACTTTGATGGGTCTAGGTGCATACCCCACTGCTGATGAGAATTCTCTCCAAATGCTTGGTATGCATGGAACT GTATATGCTAATTATGCTGTGGACAAGAGTGATCTTTTGCTTGCCTTTGGGGTGCGGTTCGATGATCGTGTCACGGGGAA GCTCGAGGCTTTTGCTAGCCGGGCTAAGATTGTTCACATTGACATTGATTCTGCTGAGATTGGGAAGAACAAGCAGCCCC ATGTGTCGGTCTGCGCGGATTTGAAGTTGGCTTTGAAAGGAATTAATCGTATCTTGGAGAGCAGGGGAGTCAAGGGTAAA CTTGATTTTAGAGCTTGGAGAGAAGAGCTGAATGAGCAGAAGCTCAGGTTTCCATTGCAATTCAAGACATTTGAGGAAGC TATTCCTCCACAGTATGCCATACAGGTTCTTGATGAGCTCACCAATGGAAATGCTATAATTAGTACTGGGGTCGGGCAGC ACCAGATGTGGGCTGCTCAATTTTACAAGTACAAGAGACCCAGACAGTGGTTAACATCCAGTGGTCTTGGTGCGATGGGG TTTGGATTGCCTGCTGCTATGGGAGCTGCTGTGGCTAACCCCGGTGATGTTGTGGTTGACATCGATGGTGATGGAAGTTT TATGATGAATGTTCAGGAGCTGGCCACTATAAAAGTGGAGAATCTCCCTGTTAAGATATTGTTGTTGAACAATCAACACT TGGGTATGGTTGTTCAGTGGGAGGATCGCTTCTATAAATCTAACAGAGCTCACACTTATTTGGGAGACCCATCCAATGAG AAAGAAGTATTCCCAAACATGTTGAAGTTTGCAGATGCTTGTGGTATACCAGCAGCTCGTGTGACGAAGAAACAAGACCT TAGAGCAGCAATTCAGAAAATGCTCGATACTCCTGGCCCCTACCTTCTCGATGTCATTGTACCGCACCAAGAGCATGTTT TACCCATGATTCCAAGTAATGGTACCTTTCAGGACGTGATAACTGAGGGTGATGGCAGGAGAAGTTACTGA
CDS sequence (LotjaGi6g1v0333700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCGGCTCCAGCTGCAAAACTCGCGTTCACCACCGTGCCTTCACCGTCTTCACGTCCCCAGAATCACGTTCTCAA ATTCACCATCCCATTTCCCTCATACCCAAACAACTCCTCTCCTCATTCCCGATGCCGTTCTCTTCAAATCTCCGCTTCCC TCTCAAATCCCACCCCCACCGCCGCCTCAGCCTCCACCGCCGTCGCAACTGAAAATTTCACCTCCCGATTTTCCCTCGAC GAGCCCCGCAAGGGTGCTGACATCCTCGTCGAAGCCTTAGAGCGCCAAGGCGTGACAGATGTATTCGCCTACCCCGGCGG CGCGTCGATGGAGATCCACCAGGCCCTGACACGCTCCTCCACCATCCGCAACGTCCTCCCCCGCCATGAGCAGGGTGGAA TCTTCGCCGCCGAAGGCTACGCTCGCTCCTCCGGCCTTCCTGGTGTCTGCATCGCCACCTCCGGCCCCGGCGCCACCAAC CTCGTCAGTGGCCTCGCCGATGCCTTGCTTGACAGCGTCCCCCTCATCGCCATCACCGGCCAAGTCCCCCGCCGCATGAT CGGCACCGATGCTTTTCAGGAAACCCCCATCGTCGAGGTAACACGTTCCATCACCAAGCACAATTACCTTGTTCTAGATA TAGATGATATCCCTAGGATTGTGAATGAGGCTTTCTTCTTAGCAACTTCAGGTAGACCTGGTCCTGTGTTGATTGATATA CCTAAAGATATTCAGCAACAGCTTGCTGTTCCAAATTGGGATCAACCTATTAAGCTACCTGGGTATATGGCTAGGTTACC TAGGTCACCCTCTGATGCACTCTTAGAGCAGGTTGTGAGGTTGCTTTTGGAATGTAAGAAACCTGTTCTCTATGCTGGGG GTGGTAGTTTGAATTCTAGTGAGGAATTGAGGCGTTTCGTTGAGCTTACCGGGGTTCCTGTTGCTAGTACTTTGATGGGT CTAGGTGCATACCCCACTGCTGATGAGAATTCTCTCCAAATGCTTGGTATGCATGGAACTGTATATGCTAATTATGCTGT GGACAAGAGTGATCTTTTGCTTGCCTTTGGGGTGCGGTTCGATGATCGTGTCACGGGGAAGCTCGAGGCTTTTGCTAGCC GGGCTAAGATTGTTCACATTGACATTGATTCTGCTGAGATTGGGAAGAACAAGCAGCCCCATGTGTCGGTCTGCGCGGAT TTGAAGTTGGCTTTGAAAGGAATTAATCGTATCTTGGAGAGCAGGGGAGTCAAGGGTAAACTTGATTTTAGAGCTTGGAG AGAAGAGCTGAATGAGCAGAAGCTCAGGTTTCCATTGCAATTCAAGACATTTGAGGAAGCTATTCCTCCACAGTATGCCA TACAGGTTCTTGATGAGCTCACCAATGGAAATGCTATAATTAGTACTGGGGTCGGGCAGCACCAGATGTGGGCTGCTCAA TTTTACAAGTACAAGAGACCCAGACAGTGGTTAACATCCAGTGGTCTTGGTGCGATGGGGTTTGGATTGCCTGCTGCTAT GGGAGCTGCTGTGGCTAACCCCGGTGATGTTGTGGTTGACATCGATGGTGATGGAAGTTTTATGATGAATGTTCAGGAGC TGGCCACTATAAAAGTGGAGAATCTCCCTGTTAAGATATTGTTGTTGAACAATCAACACTTGGGTATGGTTGTTCAGTGG GAGGATCGCTTCTATAAATCTAACAGAGCTCACACTTATTTGGGAGACCCATCCAATGAGAAAGAAGTATTCCCAAACAT GTTGAAGTTTGCAGATGCTTGTGGTATACCAGCAGCTCGTGTGACGAAGAAACAAGACCTTAGAGCAGCAATTCAGAAAA TGCTCGATACTCCTGGCCCCTACCTTCTCGATGTCATTGTACCGCACCAAGAGCATGTTTTACCCATGATTCCAAGTAAT GGTACCTTTCAGGACGTGATAACTGAGGGTGATGGCAGGAGAAGTTACTGA
Protein sequence (LotjaGi6g1v0333700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAAPAAKLAFTTVPSPSSRPQNHVLKFTIPFPSYPNNSSPHSRCRSLQISASLSNPTPTAASASTAVATENFTSRFSLD EPRKGADILVEALERQGVTDVFAYPGGASMEIHQALTRSSTIRNVLPRHEQGGIFAAEGYARSSGLPGVCIATSGPGATN LVSGLADALLDSVPLIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDIDDIPRIVNEAFFLATSGRPGPVLIDI PKDIQQQLAVPNWDQPIKLPGYMARLPRSPSDALLEQVVRLLLECKKPVLYAGGGSLNSSEELRRFVELTGVPVASTLMG LGAYPTADENSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCAD LKLALKGINRILESRGVKGKLDFRAWREELNEQKLRFPLQFKTFEEAIPPQYAIQVLDELTNGNAIISTGVGQHQMWAAQ FYKYKRPRQWLTSSGLGAMGFGLPAAMGAAVANPGDVVVDIDGDGSFMMNVQELATIKVENLPVKILLLNNQHLGMVVQW EDRFYKSNRAHTYLGDPSNEKEVFPNMLKFADACGIPAARVTKKQDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSN GTFQDVITEGDGRRSY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 55 | 656 | 602 | 0.0 | – | |
| PANTHER | 55 | 656 | 602 | 0.0 | – | |
| Gene3D | 72 | 266 | 195 | 6.4E-68 | – | |
| SUPERFAMILY | 80 | 262 | 183 | 2.95E-59 | ||
| TIGRFAM | 84 | 648 | 565 | 3.7E-205 | ||
| Pfam | 84 | 247 | 164 | 2.5E-51 | ||
| CDD | 87 | 242 | 156 | 7.12785E-69 | – | |
| SUPERFAMILY | 273 | 438 | 166 | 9.16E-55 | ||
| Pfam | 275 | 406 | 132 | 1.6E-41 | ||
| Gene3D | 275 | 439 | 165 | 5.9E-144 | – | |
| Gene3D | 440 | 626 | 187 | 5.9E-144 | – | |
| SUPERFAMILY | 448 | 648 | 201 | 7.68E-65 | ||
| CDD | 448 | 639 | 192 | 1.39094E-113 | ||
| Pfam | 470 | 625 | 156 | 2.3E-47 | ||
| ProSitePatterns | 507 | 526 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Acetolactate synthase activity | Catalysis of the reaction: 2 pyruvate = 2-acetolactate + CO2. | ||
| Biological process | Branched-chain amino acid biosynthetic process | The chemical reactions and pathways resulting in the formation of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine. | ||
| Molecular function | Thiamine pyrophosphate binding | Interacting selectively and non-covalently with thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases. | ||
| Molecular function | Flavin adenine dinucleotide binding | Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2. |
Expression pattern of LotjaGi6g1v0333700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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