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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0352400 |
| Transcript ID | LotjaGi6g1v0352400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT5G09420.1 translocon at the outer membrane of chloroplasts 64-V; Swiss-Prot: sp|F4KCL7|OE64M_ARATH Outer envelope protein 64, mitochondrial; TrEMBL-Plants: tr|I1KUC8|I1KUC8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0352400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66448544..66454373) extracted from Lotus japonicus Gifu genome v1.2.
TCATTTGGTTGCGCCGCACGACGCCACCGTCTCTTTCTCTCCGTCGTGGATCGCCGCGCGACAAAGATGCTGCCCCAATC GCTGAAGCTGGTAAAGGCCAATGCCTCAAACCCCAAGCTGTGGCTGTTCATCGGAATAGGAATCACCGGCGTCGTCGTTC TTACTGAGACACGTCGGAGAAGGAAGAAGAGCAAGACCGAAAAAGTAGACTTCGGTGCTTTTGTTCAGCGTTTTGAGCTT CTCCCCTTCCCTCACCCTCACCCTCCGCCACTCAACCAAACCCAAATGCTCTCTACTCTAACCTTCGCCGTCAAAGACAT GTTCGTTTCATTTCATTTTCAATTTTCAATTCCATTTTTGATTTGTTTACTGATTTTTTGATGTATTGGTGATTGTTTGT TGCAGATTTGATGTGAAGGGCTATGTGACTGGTTTTGGGAACCCTGACTGGGAGAGGACGCACGAGGAGGCTGGCGATAC TGCCATTGTCATCACTGCTCTGCTCAGGAATGGTGCTACTTGTGTTGGCAAGACTGTTATGGATCAATTCTCTTTTGGGT AAGCTTTTAATCAAAAGCACACTGACTTCAGAAGCTTACATTGTATGCAGCTTCTTCTTAAAGTGATTCCTAAAAGTGAT TATGAGGCTTTCTACAGAAGAATAAATCAGATTGCTGATTTAGAAGTGATTTAATTTTACTTATTGTGGGTGGCATGGCA GGATTTCTGGTGAGAACAAGCATTATGGGACACCAACCAATCCTCTGTTGCCGTCTTGCATTCCTGGAGGTTCTTCCAGT GGTTCAGCTGTAGCAGTTGCTGCTGGCCTAGTTGACTTTGCTATTGGTGAGTTTACCTGGTTACCACTTGCATGTTCCAT GGTTCATTCAAAAAATACTAATCTGTGACCATTTATTTATTGCCTTTTCATGTTTTTGTCATTTATCAGACGTCTCTTTC TTGTTTAGGGAGTTAGGATTATTCTTATGTCTAAGTGATTCCTAGAAAGTGGAAATCTTGTGTCTTTTTTTTTGGGTCTG CTGCTCAATTTAAATAATTTTCACTGTAAATAAGACCTGGAATAGCTTATTTGAGCTTATCTTATAGCATAAGCGCGTAT GCAAGTGTTTGGGAGAGCTTTGGTAATAGCTTATGACCTACCTATATGCTGTTTGAGCTTATTTTCATAAGGTGTCCATA TTAGCTTATGAGTAAGAGCTTTTGCTTGTCCATAACTTATTTCCGGTTTATTTCAATAAGGCTCTCAAATTGGCTTATTA ATAAGCACTTATGCCATAAGCGCTTATCGCCATAAACGCTTAATTAATTTGTTCACCCAAACACACCCTTAATGTATGTG CAGCTGTTTCTTAGAAATAGTATTTCCCTCGGTGTGTTTCATTTGTAATGGTCATATATGTATCAATTTTAATCAAAGAG ATCAGGTTGTATTTGACAATTCTCAAGTGTTTGTGTTGGCATTGATGTTCTGAGTTTTAATTTAGTTAGTATGAATTGCA CGGCTGCTTCATTTGGTTGCTGAGAGGAAGGAGGGTCGATGCAAAGATAATTTGAAATCATAAGGCTACCTCTTCAACCA AAGCAGCTGTAAGATTCAAATTTTGAATTTATTCGTTTTTCTTGAAGCTGGTTTATATGATCCATATACTAATATATTTG TCTTTACCTGTATTTTAATTTCTCACTAAAAAAGTCTATACACAGTCTTCTTCGTTATACCTAATTGCAAATCTTATTTG GGGGTGCAGTGAGTTTCACTTTGCTGGCATTCAGTTCTATGGTTGTTGTTGTGATCTACACATTAAGATAGTTGCACAAA TTATAGGATTCTAGCTCCTAGCTTATTTTTGTGATCTCTTTCATATACTGTTGCAGTATGGCTTGTTGTGCATTGTTTGT ATCTTTCTGATCCCATAACAGGCTTAATGGACACATACACAGTGCAGTCATCTTATGCTCATGAAAACTATTTGTTTGAA TTTTCAGTCAAGTATATGGATGTGAACTTGGTAAAATATTGTGATTTTGTAGGTACTGATACTACAGGTTGTGTAAGAAT TCCAGCAGCATTCTGTGGTATTCTTGGATTTCGACCATCTCATGGAATTGTATCCACCATTGGAGTTCTTCCAAACGCTC AAAGCTTGGACACTGTTGGTATGAGCATATTTATGTGATTTTGTTGCTATGTTTTATTCATTAGTTTAGAACTATCCTTC CATGCCTTCAATCATTTTCAAACAATTGAATTCTGCATCATGTTTTCTTTGTGAGTAGTTTTATGTGGAGGACATTGAGA AATTAAATGCACAAGTTAGTAAATTTTCAAATGAGTCCCACAATATAAAATATGATGTGGTACCTAATACCTATGCTTAA TGTCTTGCTCTGCCACCCCGTTATCCCATTCAGAAATTACTGCTTAAGTGCTGGGGGTATTGAATTTGGATTTCTTTATT ACTCTTTTTTTTGGGCATACAGAGACAGTTTTAATCTTTTCTCTTTGAATATTTATATCTTGATTGGATTATTGAATTGG AGGATGGTTTGCTCGAGATCCGTCTATTCTTCATCGTGTTGGACATATTTTACTTCAATTGAATTCTGTGGAGCCCAAAA GGACCAGGCGTATCATGTTTGCTTATGATCTTTTTCAATTATCTAAAGTTCCTGCTCAGCAGACGGTATATGTTATGGGC AAAGCTATTGAGAATTTGTCTGGTTGTAAGTTTCCACACCTTTGAAGACCAGCCTCTGTTGCTTTCATACATATTTACTA TTTTGTTGTTGTTAATTGTATTACAGTGGGTAAAAAAACTCTGAATGTCTAGACCAGTCTAAAGGGGTTTCATGAACAAT TAGGTTATCTGGTCCTTTTGGTTTTGCAGATCAGTCTCTACAGCATATAAATCTATGGCAGTATATTGCTACTGACGTGC CCAGTCTAAAGGGATTTCATGAACAATTAACTCAACAACAAAATGTAGCATCTGTGCTGAAAGCTCTCACTTCGGTTATG TTTTCATTGCAAGGGTATTCTATCATATCATTTGATGTTGAATCATGATTTTTGTTTTATTATGTTATGTTATGCTTTAT GTTCCATGTGTTTGATGATTAATCACATCTTTTTTGTAATAGAACATATTGCCTTGTAGAATTCTGTTGAGAGCCTCACA GTTATTTTATAACTACATATTTGCATCTGCTCTTCAGATATGAATTCAAAACCAATCATGAAGAATGGGTTAAATCGGTC AAACCCAGGCTAGGGCGTGGTGTGTCCGATCGTGTTTTTGCAGCCATGAAGACTACACATGATAATATAAAAGCCTTGTA TAAAGTCAGAACTGAGTTGCGAGGTTCTTTTCAACGTCTACTGAAGGTACTGTAATATCTGTAGTTACTTTTTCAGTAAT GCTCTAGTATGTTGTCAAATCTCATTGGTGTTAGAATTATTATTCCAAAATGAAAGAAGAAAATGGTACAAAAGACTAAT ATGTTTTTGTCACTCTCCGATTTGGGATTTTGGTATAGAAGTTAACTTTTTCTTAACTTGTTATAGACAAGAAATAGGGA AAATAGATTAGTAGTCCAGCATAGCATTAAGTGTACCTATCAATTTTCGAAAGAAGTGGTATGTCTTAAACTTATAACAT GATTCTCATTTACTTATAATGGAAGATAACCTAGGTCTCTTATTTTTATTATTTAAAGGCGACTCTTGTTAAGTCTATTG AACGTGTCTATGCTATGCTCTTACCTTCTTTGTTTTGATTGTCCCACAGGATGATGGAATACTAGTTATTCCCACAGTTG CAGACAATCCATTAGAGCTTAATACACTGAAAGGGTTTTATTCTGAGTACCATGACAGAGCTTTTGCATTATCTAGCATT GCTAGTATTTCTGGATGTTGTCAGGTAATTCGATATCTTCTTTTCTCTGGAGATCATTTTCATCTGCTTATGTTATGAAT CTTTAGTTAAAAACAAGGTAAGGTTGCATACTATAGACCAAATGGTTTGATCTTTTCCCGGACCCTGCGCATGCGGGAGC TTTGTGCACCGGACTGCTCTTTTTTATGTTCTTTGATTGATTTTTGTATTTTGGCTTTTACTTCATTTACAGGTTGCAAT TCCATTAGGATATCACAATGATTGCTGTGTTTCTGTTTCATTCATCTCATCGCATGGAGCTGATAAATTTCTTCTTGATA CGGTCTTGGATATGTATAATACTCTTCAAGAGCAAGTTAGTGTTGCTGATTCCTATGCTCTCCCACTACCAGATAGCAAT GGTAATTTGGAATCTTCTGAACTTTTAAAAGAGAAGGTTAGTTCTACCCCTAAGCATTTTATCTGTCAGGATTCCTTTAT AAATTATAATTTGTAACTGAAGTTATTATCTAAAACACATGATGTTTGATTAATGATGAATGTGAACTTGAATGATGGGC TATGCAGTAGTCAAGCTAAAGCATAAGATCTTATTACGGGCAATAAAAGGATAGATTTTCAGGGTGTGCAATGGATCACT GAAAGATGAATTTTCTTTAGGGCAATGCAGCATTTAAAGGAAGGCTGTGGAATAAAGCTGTCAACTACTACACCGAGGCT ATCAAGTTGAACGGGATGAATGCAACTTACTACAACAACAGGGCAGCTGCTTACATAGAGTTAGGATGGTATGCCGTTTT TCCTGCTTGCCAATTGGTCGTTTCACTGTTTCTCTGTGTAATTCGTGTACCTCCCGTGAAATTATGCAGCTTTCAGCAAG CTGAAGAAGACTGCAATGAGGCCATATTACATGATAAGAAGGTGAGAAGATGGACATGTGACAGCGGCAAAATCTTGAAA AAACTTGTATTCTAAAATCAACATGTATAATAATAATAAATTATTAAACTCTAGTATGGCTACTAAACTATCATTGATTT TTGAAAATGTTTATCTACTAGCTTACTATATCTTTATGAAGTTTGACATCTGAATGTGTACAAATATCTATAGAATTTAT CAAATATATTCAGGGTTGTATATTATATTTTAATGCAGAATGTGAAGGCATATCTGAGACGTGGAACTGCTAGAGAATCG CTACGTCAGTATAAGGAAGCTCTAAAAGGTATGGCTCAGTTTTTAAAACCCTTTCTTGTATCTCTATCTCACTTGAGTAG TTGAGTCCAATTTGGAATGCTTCAACTTCAAGAGTTCCCTACAAGTATCATTGAACACCAATCACTTGTGAATTTTGATT TCCCAAAGGGTGTCCGTTTATGTCTGAGCTTTATTATTCACGTTTGTTCTCTTCATCCTGAGTGTTGGAGCATGATGAGT AAAAAATCATTTGGAACAACTCTAAGTTTGTTCAGTATCATTTTCTCATGCTGTGCAGATTTCAAGCATGCTCTTGTTCT TGAACCGCAGAACAAAACCGCTAGTGTTGCTGAGAAAAGACTCAGAAAATTGATGAGTTGATACATACGGGCTTCGGCAC TTTTGACCCTGTCCTCCCCCCCTACTGTTTGAGAATGCTAATGGCTGTGGAAATATGATTTTTAGCTCCCTTCGAAGTGA AGAAGATAGGGGACTATTATGTCGATGTGATGCTGCATTTTTTGGGCTCATTTCATATTCTATTAGGAGTATTTATTTTA GCAACTTACTTTTGGGACATAGCACACGATGTAGATATGGGCAGCACACAGCACACGATATAACTAAGAATTATCTGGCG CAATTTTTTTTTTTTTTTCGTGTATATCAAAGTATCATGACATAACTCATAAAATAAGTATCATGACATA
CDS sequence (LotjaGi6g1v0352400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGCCCCAATCGCTGAAGCTGGTAAAGGCCAATGCCTCAAACCCCAAGCTGTGGCTGTTCATCGGAATAGGAATCAC CGGCGTCGTCGTTCTTACTGAGACACGTCGGAGAAGGAAGAAGAGCAAGACCGAAAAAGTAGACTTCGGTGCTTTTGTTC AGCGTTTTGAGCTTCTCCCCTTCCCTCACCCTCACCCTCCGCCACTCAACCAAACCCAAATGCTCTCTACTCTAACCTTC GCCGTCAAAGACATATTTGATGTGAAGGGCTATGTGACTGGTTTTGGGAACCCTGACTGGGAGAGGACGCACGAGGAGGC TGGCGATACTGCCATTGTCATCACTGCTCTGCTCAGGAATGGTGCTACTTGTGTTGGCAAGACTGTTATGGATCAATTCT CTTTTGGGATTTCTGGTGAGAACAAGCATTATGGGACACCAACCAATCCTCTGTTGCCGTCTTGCATTCCTGGAGGTTCT TCCAGTGGTTCAGCTGTAGCAGTTGCTGCTGGCCTAGTTGACTTTGCTATTGGTACTGATACTACAGGTTGTGTAAGAAT TCCAGCAGCATTCTGTGGTATTCTTGGATTTCGACCATCTCATGGAATTGTATCCACCATTGGAGTTCTTCCAAACGCTC AAAGCTTGGACACTGTTGGATGGTTTGCTCGAGATCCGTCTATTCTTCATCGTGTTGGACATATTTTACTTCAATTGAAT TCTGTGGAGCCCAAAAGGACCAGGCGTATCATGTTTGCTTATGATCTTTTTCAATTATCTAAAGTTCCTGCTCAGCAGAC GGTATATGTTATGGGCAAAGCTATTGAGAATTTGTCTGGTTATCAGTCTCTACAGCATATAAATCTATGGCAGTATATTG CTACTGACGTGCCCAGTCTAAAGGGATTTCATGAACAATTAACTCAACAACAAAATGTAGCATCTGTGCTGAAAGCTCTC ACTTCGGTTATGTTTTCATTGCAAGGATATGAATTCAAAACCAATCATGAAGAATGGGTTAAATCGGTCAAACCCAGGCT AGGGCGTGGTGTGTCCGATCGTGTTTTTGCAGCCATGAAGACTACACATGATAATATAAAAGCCTTGTATAAAGTCAGAA CTGAGTTGCGAGGTTCTTTTCAACGTCTACTGAAGGATGATGGAATACTAGTTATTCCCACAGTTGCAGACAATCCATTA GAGCTTAATACACTGAAAGGGTTTTATTCTGAGTACCATGACAGAGCTTTTGCATTATCTAGCATTGCTAGTATTTCTGG ATGTTGTCAGGTTGCAATTCCATTAGGATATCACAATGATTGCTGTGTTTCTGTTTCATTCATCTCATCGCATGGAGCTG ATAAATTTCTTCTTGATACGGTCTTGGATATGTATAATACTCTTCAAGAGCAAGTTAGTGTTGCTGATTCCTATGCTCTC CCACTACCAGATAGCAATGGTAATTTGGAATCTTCTGAACTTTTAAAAGAGAAGGGCAATGCAGCATTTAAAGGAAGGCT GTGGAATAAAGCTGTCAACTACTACACCGAGGCTATCAAGTTGAACGGGATGAATGCAACTTACTACAACAACAGGGCAG CTGCTTACATAGAGTTAGGATGCTTTCAGCAAGCTGAAGAAGACTGCAATGAGGCCATATTACATGATAAGAAGAATGTG AAGGCATATCTGAGACGTGGAACTGCTAGAGAATCGCTACGTCAGTATAAGGAAGCTCTAAAAGATTTCAAGCATGCTCT TGTTCTTGAACCGCAGAACAAAACCGCTAGTGTTGCTGAGAAAAGACTCAGAAAATTGATGAGTTGA
Protein sequence (LotjaGi6g1v0352400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPQSLKLVKANASNPKLWLFIGIGITGVVVLTETRRRRKKSKTEKVDFGAFVQRFELLPFPHPHPPPLNQTQMLSTLTF AVKDIFDVKGYVTGFGNPDWERTHEEAGDTAIVITALLRNGATCVGKTVMDQFSFGISGENKHYGTPTNPLLPSCIPGGS SSGSAVAVAAGLVDFAIGTDTTGCVRIPAAFCGILGFRPSHGIVSTIGVLPNAQSLDTVGWFARDPSILHRVGHILLQLN SVEPKRTRRIMFAYDLFQLSKVPAQQTVYVMGKAIENLSGYQSLQHINLWQYIATDVPSLKGFHEQLTQQQNVASVLKAL TSVMFSLQGYEFKTNHEEWVKSVKPRLGRGVSDRVFAAMKTTHDNIKALYKVRTELRGSFQRLLKDDGILVIPTVADNPL ELNTLKGFYSEYHDRAFALSSIASISGCCQVAIPLGYHNDCCVSVSFISSHGADKFLLDTVLDMYNTLQEQVSVADSYAL PLPDSNGNLESSELLKEKGNAAFKGRLWNKAVNYYTEAIKLNGMNATYYNNRAAAYIELGCFQQAEEDCNEAILHDKKNV KAYLRRGTARESLRQYKEALKDFKHALVLEPQNKTASVAEKRLRKLMS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | - | – | |
| PANTHER | 4 | 608 | 605 | 0.0 | – | |
| PANTHER | 4 | 608 | 605 | 0.0 | – | |
| Phobius | 16 | 33 | 18 | - | – | |
| Phobius | 34 | 608 | 575 | - | – | |
| Gene3D | 67 | 477 | 411 | 9.5E-81 | ||
| Pfam | 71 | 225 | 155 | 3.0E-50 | ||
| SUPERFAMILY | 73 | 461 | 389 | 1.7E-78 | ||
| Gene3D | 482 | 608 | 127 | 1.0E-40 | ||
| SUPERFAMILY | 489 | 597 | 109 | 6.01E-30 | ||
| ProSiteProfiles | 492 | 593 | 102 | 22.802 | ||
| ProSiteProfiles | 492 | 525 | 34 | 7.287 | ||
| SMART | 492 | 525 | 34 | 0.01 | ||
| ProSiteProfiles | 526 | 559 | 34 | 6.903 | ||
| SMART | 526 | 559 | 34 | 5.6E-5 | ||
| SMART | 560 | 593 | 34 | 5.9E-6 | ||
| ProSiteProfiles | 560 | 593 | 34 | 11.8 | ||
| Pfam | 561 | 593 | 33 | 0.062 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0352400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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