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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1786070 |
| Transcript ID | Lj1g3v1786070.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Cell division protease ftsH-like protein [Medicago truncatula] gi|357465741|ref|XP_003603155.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 172 | 172 | – | – | |
| Hamap | 2 | 666 | 665 | 31.652 | ||
| PANTHER | 154 | 695 | 542 | 0 | – | |
| PANTHER | 154 | 695 | 542 | 0 | – | |
| Phobius | 173 | 191 | 19 | – | – | |
| Phobius | 192 | 696 | 505 | – | – | |
| TIGRFAM | 203 | 645 | 443 | 4.30E-181 | ||
| SUPERFAMILY | 214 | 467 | 254 | 2.38E-66 | ||
| Gene3D | 214 | 393 | 180 | 3.20E-60 | ||
| SMART | 249 | 385 | 137 | 9.40E-26 | ||
| CDD | 250 | 382 | 133 | 2.30E-28 | – | |
| Pfam | 253 | 382 | 130 | 2.20E-43 | ||
| ProSitePatterns | 353 | 371 | 19 | – | ||
| Gene3D | 394 | 466 | 73 | 9.40E-23 | – | |
| Pfam | 444 | 643 | 200 | 3.40E-74 | ||
| SUPERFAMILY | 464 | 649 | 186 | 3.53E-65 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj1g3v1786070.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1786070.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.