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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR000642
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We have found 58 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.877s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0077349.1
n.a. PREDICTED: ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like [Glycine max] gi|356553056|ref|XP_003544874.1| chr0 29661584 29669624 +
2 domain predictions
3 GO terms
Lj0g3v0166169.1
n.a. PREDICTED: ATP-dependent zinc metalloprotease YME1L1-like [Megachile rotundata] gi|383848105|ref|XP_003699692.1| chr0 79022182 79022929 +
2 domain predictions
3 GO terms
Lj0g3v0218209.1
n.a. n.a. chr0 111212273 111221890 -
2 domain predictions
3 GO terms
Lj0g3v0273739.1
n.a. PREDICTED: ATP-dependent zinc metalloprotease FTSH 12, chloroplastic-like [Glycine max] gi|356523562|ref|XP_003530406.1| chr0 141886606 141893375 -
2 domain predictions
3 GO terms
Lj0g3v0325249.2
n.a. PREDICTED: ATP-dependent zinc metalloprotease FTSH 5, mitochondrial-like [Brachypodium distachyon] gi|357114782|ref|XP_003559173.1| chr0 169971345 169974164 +
2 domain predictions
3 GO terms
Lj0g3v0325259.1
n.a. PREDICTED: ATP-dependent zinc metalloprotease FTSH 5, mitochondrial-like [Brachypodium distachyon] gi|357114782|ref|XP_003559173.1| chr0 169971345 169974606 +
2 domain predictions
3 GO terms
Lj1g3v0948570.1
n.a. PREDICTED: ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial-like [Cicer arietinum] gi|502124127|ref|XP_004498398.1| chr1 11885945 11900091 +
2 domain predictions
3 GO terms
Lj1g3v1786070.1
n.a. Cell division protease ftsH-like protein [Medicago truncatula] gi|357465741|ref|XP_003603155.1| chr1 20951976 20962824 -
2 domain predictions
3 GO terms
Lj1g3v1786070.3
n.a. Cell division protease ftsH-like protein [Medicago truncatula] gi|357465741|ref|XP_003603155.1| chr1 20951976 20978167 -
2 domain predictions
3 GO terms
Lj1g3v2268450.1
n.a. PREDICTED: ATP-dependent zinc metalloprotease FTSH, chloroplastic-like [Cicer arietinum] gi|502131153|ref|XP_004500893.1| chr1 26729581 26733197 +
2 domain predictions
3 GO terms
Lj1g3v2965880.1
n.a. PREDICTED: ATP-dependent zinc metalloprotease FTSH 6, chloroplastic-like [Glycine max] gi|356568662|ref|XP_003552529.1| chr1 33662708 33664858 -
2 domain predictions
3 GO terms
Lj1g3v4528620.1
n.a. cell division protein FtsH (ISS) [Ostreococcus tauri] gi|308808470|ref|XP_003081545.1| chr1 53436002 53436409 +
2 domain predictions
3 GO terms
Lj2g3v2183250.1
n.a. PREDICTED: ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial-like [Glycine max] gi|356516023|ref|XP_003526696.1| chr2 32754260 32754819 +
2 domain predictions
3 GO terms
Lj3g3v0273610.1
n.a. PREDICTED: ATP-dependent zinc metalloprotease FtsH 3-like [Glycine max] gi|356557300|ref|XP_003546955.1| chr3 1634495 1641889 -
2 domain predictions
3 GO terms
Lj3g3v3213280.1
n.a. AAA-metalloprotease FtsH [Pisum sativum] gi|15021761|gb|AAK77908.1|AF397903_1 chr3 39659103 39679882 -
2 domain predictions
3 GO terms
Lj3g3v3213280.2
n.a. PREDICTED: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial-like isoform X1 [Cicer arietinum] gi|502148467|ref|XP_004507174.1| chr3 39674546 39679947 -
2 domain predictions
3 GO terms
Lj4g3v0243990.1
n.a. PREDICTED: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic-like [Cicer arietinum] gi|502141848|ref|XP_004504668.1| chr4 2886919 2890463 +
2 domain predictions
3 GO terms
Lj4g3v1223810.1
n.a. cell division protein ftsH (ftsH)-like [Oryza sativa Japonica Group] gi|52076370|dbj|BAD45191.1| chr4 18304397 18304966 -
2 domain predictions
3 GO terms
Lj4g3v3014200.1
n.a. PREDICTED: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic-like [Glycine max] gi|356527688|ref|XP_003532440.1| chr4 39969633 39982076 +
2 domain predictions
3 GO terms
Lj5g3v1358170.1
n.a. Cell division protease ftsH-like protein [Medicago truncatula] gi|357441419|ref|XP_003590987.1| chr5 20725674 20743349 +
2 domain predictions
3 GO terms
Lj5g3v1358170.3
n.a. Cell division protease ftsH-like protein [Medicago truncatula] gi|357441419|ref|XP_003590987.1| chr5 20730067 20743349 +
2 domain predictions
3 GO terms
Lj6g3v0609530.1
n.a. PREDICTED: ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like [Glycine max] gi|356569550|ref|XP_003552962.1| chr6 6086295 6087384 +
2 domain predictions
3 GO terms
Lj6g3v1382270.1
n.a. ATP-dependent zinc metalloprotease FTSH 8, chloroplastic-like [Glycine max] gi|359806106|ref|NP_001241188.1| chr6 16470616 16481398 +
2 domain predictions
3 GO terms
LotjaGi1g1v0122800.1
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT5G58870.1 FTSH protease 9; Swiss-Prot: sp|Q9FIM2|FTSH9_ARATH ATP-dependent zinc metalloprotease FTSH 9, chloroplastic; TrEMBL-Plants: tr|I1MB96|I1MB96_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0122800 LjG1.1_chr1 19471361 19480713 -
2 domain predictions
3 GO terms
LotjaGi1g1v0171800.1
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT5G53170.1 FTSH protease 11; Swiss-Prot: sp|Q9FGM0|FTSHB_ARATH ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151TYS4|A0A151TYS4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0171800 LjG1.1_chr1 32743968 32759240 +
2 domain predictions
3 GO terms
LotjaGi1g1v0171800.2
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT5G53170.1 FTSH protease 11; Swiss-Prot: sp|Q9FGM0|FTSHB_ARATH ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151TYS4|A0A151TYS4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0171800 LjG1.1_chr1 32744006 32758431 +
2 domain predictions
3 GO terms
LotjaGi1g1v0196700_LC.1
n.a. ATP-dependent zinc metalloprotease FtsH; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q0DHL4|FTSH8_ORYSJ ATP-dependent zinc metalloprotease FTSH 8, mitochondrial; TrEMBL-Plants: tr|A0A1J7GZI6|A0A1J7GZI6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0196700_LC LjG1.1_chr1 39784213 39787000 -
2 domain predictions
3 GO terms
LotjaGi1g1v0367100.1
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT2G26140.1 FTSH protease 4; Swiss-Prot: sp|O80983|FTSH4_ARATH ATP-dependent zinc metalloprotease FTSH 4, mitochondrial; TrEMBL-Plants: tr|G7J7N5|G7J7N5_MEDTR ATP-dependent zinc metalloprotease FTSH protein; Found in the gene: LotjaGi1g1v0367100 LjG1.1_chr1 84492603 84503675 -
2 domain predictions
3 GO terms
LotjaGi1g1v0367100.2
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT2G26140.1 FTSH protease 4; Swiss-Prot: sp|O80983|FTSH4_ARATH ATP-dependent zinc metalloprotease FTSH 4, mitochondrial; TrEMBL-Plants: tr|G7J7N5|G7J7N5_MEDTR ATP-dependent zinc metalloprotease FTSH protein; Found in the gene: LotjaGi1g1v0367100 LjG1.1_chr1 84493024 84503460 -
2 domain predictions
3 GO terms
LotjaGi1g1v0434400.1
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT5G42270.1 FtsH extracellular protease family; Swiss-Prot: sp|Q9BAE0|FTSH_MEDSA ATP-dependent zinc metalloprotease FTSH, chloroplastic; TrEMBL-Plants: tr|A0A067KL39|A0A067KL39_JATCU Uncharacterized protein; Found in the gene: LotjaGi1g1v0434400 LjG1.1_chr1 92887979 92894584 +
2 domain predictions
3 GO terms
LotjaGi1g1v0503600.1
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT5G15250.1 FTSH protease 6; Swiss-Prot: sp|Q1PDW5|FTSH6_ARATH ATP-dependent zinc metalloprotease FTSH 6, chloroplastic; TrEMBL-Plants: tr|I1N4D7|I1N4D7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0503600 LjG1.1_chr1 102128782 102132874 -
2 domain predictions
3 GO terms
LotjaGi1g1v0503600.2
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT5G15250.1 FTSH protease 6; Swiss-Prot: sp|Q1PDW5|FTSH6_ARATH ATP-dependent zinc metalloprotease FTSH 6, chloroplastic; TrEMBL-Plants: tr|A0A151TCA2|A0A151TCA2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0503600 LjG1.1_chr1 102129016 102129401 -
2 domain predictions
3 GO terms
LotjaGi1g1v0702100_LC.1
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT2G30950.1 FtsH extracellular protease family; Swiss-Prot: sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic; TrEMBL-Plants: tr|A4S3J8|A4S3J8_OSTLU Uncharacterized protein; Found in the gene: LotjaGi1g1v0702100_LC LjG1.1_chr1 127053180 127054594 -
2 domain predictions
3 GO terms
LotjaGi1g1v0758200_LC.1
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q9HGM3|YTA12_SCHPO Mitochondrial respiratory chain complexes assembly protein rca1; TrEMBL-Plants: tr|I3SXA9|I3SXA9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0758200_LC LjG1.1_chr1 133166116 133174670 -
2 domain predictions
3 GO terms
LotjaGi2g1v0375900.1
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q8VZI8|FTSHA_ARATH ATP-dependent zinc metalloprotease FTSH 10, mitochondrial; TrEMBL-Plants: tr|A0A1J7GZI6|A0A1J7GZI6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0375900 LjG1.1_chr2 87326336 87338691 -
2 domain predictions
3 GO terms
LotjaGi2g1v0375900.2
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q8VZI8|FTSHA_ARATH ATP-dependent zinc metalloprotease FTSH 10, mitochondrial; TrEMBL-Plants: tr|A0A1J7GZI6|A0A1J7GZI6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0375900 LjG1.1_chr2 87326445 87331651 -
2 domain predictions
3 GO terms
LotjaGi2g1v0375900.3
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q0DHL4|FTSH8_ORYSJ ATP-dependent zinc metalloprotease FTSH 8, mitochondrial; TrEMBL-Plants: tr|W9RUG9|W9RUG9_9ROSA ATP-dependent zinc metalloprotease FTSH 10; Found in the gene: LotjaGi2g1v0375900 LjG1.1_chr2 87327493 87337959 -
2 domain predictions
3 GO terms
LotjaGi2g1v0375900.4
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q0DHL4|FTSH8_ORYSJ ATP-dependent zinc metalloprotease FTSH 8, mitochondrial; TrEMBL-Plants: tr|A0A1J7GZI6|A0A1J7GZI6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0375900 LjG1.1_chr2 87327493 87337959 -
2 domain predictions
3 GO terms
LotjaGi2g1v0375900.5
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q8VZI8|FTSHA_ARATH ATP-dependent zinc metalloprotease FTSH 10, mitochondrial; TrEMBL-Plants: tr|A0A1J7GZI6|A0A1J7GZI6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0375900 LjG1.1_chr2 87333634 87338608 -
2 domain predictions
3 GO terms
LotjaGi2g1v0375900.6
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q0DHL4|FTSH8_ORYSJ ATP-dependent zinc metalloprotease FTSH 8, mitochondrial; TrEMBL-Plants: tr|A0A1J7GZI6|A0A1J7GZI6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0375900 LjG1.1_chr2 87333637 87337959 -
2 domain predictions
3 GO terms
LotjaGi2g1v0376100.1
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q8VZI8|FTSHA_ARATH ATP-dependent zinc metalloprotease FTSH 10, mitochondrial; TrEMBL-Plants: tr|Q94ES0|Q94ES0_PEA AAA-metalloprotease FtsH; Found in the gene: LotjaGi2g1v0376100 LjG1.1_chr2 87341386 87347226 -
2 domain predictions
3 GO terms
LotjaGi2g1v0376100.2
n.a. ATP-dependent zinc metalloprotease FtsH; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q0DHL4|FTSH8_ORYSJ ATP-dependent zinc metalloprotease FTSH 8, mitochondrial; TrEMBL-Plants: tr|A0A0D2QCK5|A0A0D2QCK5_GOSRA Uncharacterized protein; Found in the gene: LotjaGi2g1v0376100 LjG1.1_chr2 87341909 87345207 -
2 domain predictions
3 GO terms
LotjaGi2g1v0376100.3
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q8VZI8|FTSHA_ARATH ATP-dependent zinc metalloprotease FTSH 10, mitochondrial; TrEMBL-Plants: tr|A0A1J7GZI6|A0A1J7GZI6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0376100 LjG1.1_chr2 87341909 87346373 -
2 domain predictions
3 GO terms
LotjaGi2g1v0376100.4
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q8VZI8|FTSHA_ARATH ATP-dependent zinc metalloprotease FTSH 10, mitochondrial; TrEMBL-Plants: tr|A0A1J7GZI6|A0A1J7GZI6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0376100 LjG1.1_chr2 87341909 87346405 -
2 domain predictions
3 GO terms
LotjaGi3g1v0020400.1
n.a. ATP-dependent zinc metalloprotease FtsH; TAIR: AT3G16290.1 AAA-type ATPase family protein; Swiss-Prot: sp|A8MPR5|FTSI2_ARATH Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic; TrEMBL-Plants: tr|K7M918|K7M918_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0020400 LjG1.1_chr3 2089615 2095730 -
2 domain predictions
3 GO terms
LotjaGi3g1v0299200.1
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G79560.1 FTSH protease 12; Swiss-Prot: sp|Q9SAJ3|FTSHC_ARATH ATP-dependent zinc metalloprotease FTSH 12, chloroplastic; TrEMBL-Plants: tr|A0A1J7HBE4|A0A1J7HBE4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0299200 LjG1.1_chr3 62411374 62427332 +
2 domain predictions
3 GO terms
LotjaGi3g1v0299200.2
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G79560.1 FTSH protease 12; Swiss-Prot: sp|Q9SAJ3|FTSHC_ARATH ATP-dependent zinc metalloprotease FTSH 12, chloroplastic; TrEMBL-Plants: tr|K7L8H2|K7L8H2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0299200 LjG1.1_chr3 62412401 62426824 +
2 domain predictions
3 GO terms
LotjaGi3g1v0299200.3
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G79560.1 FTSH protease 12; Swiss-Prot: sp|Q9SAJ3|FTSHC_ARATH ATP-dependent zinc metalloprotease FTSH 12, chloroplastic; TrEMBL-Plants: tr|K7L8H2|K7L8H2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0299200 LjG1.1_chr3 62412472 62426824 +
2 domain predictions
3 GO terms
LotjaGi4g1v0021600.1
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT2G30950.4 FtsH extracellular protease family; Swiss-Prot: sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic; TrEMBL-Plants: tr|V7CNS0|V7CNS0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0021600 LjG1.1_chr4 2644989 2648895 +
2 domain predictions
3 GO terms
LotjaGi4g1v0021600.2
n.a. ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT2G30950.4 FtsH extracellular protease family; Swiss-Prot: sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic; TrEMBL-Plants: tr|V7CNS0|V7CNS0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0021600 LjG1.1_chr4 2644989 2648895 +
2 domain predictions
3 GO terms