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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0018500 |
Transcript ID | LotjaGi1g1v0018500.2 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Multidrug resistance protein ABC transporter family protein; TAIR: AT3G13080.1 multidrug resistance-associated protein 3; Swiss-Prot: sp|Q9LK64|AB3C_ARATH ABC transporter C family member 3; TrEMBL-Plants: tr|I1M6I4|I1M6I4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0018500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2273576..2279776) extracted from Lotus japonicus Gifu genome v1.2.
TGTTTTTCGTTTTCTCATCATGCACTCTGCCACTGGCTTTTTCCTTGAACCCATTTTCCTTCATGGTTTATCTGGGTTCC TTCATCTACTGCTTATAGTGGCGGTTTTTGCATCATGGGTATGGAACAAATTCACATCTTATGCTAGTTCCAGTGCTAAG GTTGATGGTGGCGGCTCTAAGGAGAAAACAAACAACACTCTGTTTTCTGTGACTCTGTTTTGTTCTCTTGGTGTCTCTGC TTTCAACCTAGCTCTGTTACTGTTCAACTACTTCTACTGGTACAGCAATGGCTGGTCAGAAGAAAAGCTCGTGACCCTTT TGGATTTAGCGCTTAAAATGGTTGCTTGGGGTGTTGTTTGTGCTTGTTTCCTCAAAGGGTTCTCTAGAAGGTTTCCATTT TTCCTCTTCAGAATCTGGTGCGGTTTCTTCCTCTTTGTTTCATGTTACTGTTTTGCTGTGGATGTTGTTGTTATCTGTGA GAAAGACACTGCATTGCCACCTCAGCATGTGGTTTCTGATGTGGTGTCTGCTATTGTGGGCTTGTTCTTCTGTTGTGTGG CTTTTGTTTTGAAGAATGAGGGTGGTGGTGGTAGTAACAGTGTCCATGAACCTCTATTGAAAGGGGATTCACAAGTTGGT AATGGTAAAGAGAGCAAAGGGAGTGACACTGTTACCCCTTTTTCCAGTGCTGGAATTTTCAGCATTCTTACATTTGCTTG GTCTGGTCCTCTTATAGCTGCTGGTTATAAGAAAACCTTGGACCTTGAAGATGTGCCTCAACTTGATTGCAGAGACAGTG TTATTGGAGCATTTCCAGGTTTTAAGGAAAAGGTTGAGAGTGATTTTGGTGGAATTAACACCTTGACCACACTTAAGCTT GTTAAGTTATTGATAATCTCGGCGTGGAAAGAGATTCTCTTCACTGCTTTTCTTGCATTGTTGAACACTTTGGCTTCTTA TGTTGGTCCTTATCTCATTGATGGTTTTGTTCAGTACCTGGATGGACGGAGGCTATATGAAAACCAGGGCTTTGTTCTGG TTTCTGCATTTTTCTTTGCGAAAATTGTTGAGTGTTTGTCACAAAGGCATTGGTTCTTTAGGTTGCAGCAAGTTGGACTT CGAATCCGAGCATTGCTTGTGACAATGATTTATAACAAAGCCTTGACCCTTTCGTGTCAATCGAAGCAGGGCCACTCTTC TGGGGAGATAGTCAATTTCATGACTGTGGATGCTGAAAGAGTTGGTGTGTTCAGTTGGTATATGCATGATTTGTGGATGG TGGTACTGCAGGTTTCATTAGCCCTTGTGATTTTGTATAAGAACCTTGGTGTTGCTGCAATCGCTGCTTTTGTTGCAACC ATCATTGTTATGTTAGCCAATGTTCCCTTGGGATCATTGCAAGAGAAGTTTCAAAAGAAGTTGATGGAGTCAAAAGATAA GAGAATGAAGACCACTTCTGAGATTTTAAGGAACGTGAGAATCCTCAAACTGCAAGGGTGGGAAATGAAGTTTCTATCTA AGATAACTGAGCTCAGGAACACTGAACAAAACTGGTTGAAAAAATATCTGTACACAGCAGCCATGACTACATTTGTGTTT TGGGGTGCCCCCACATTTGTTTCCGTGGCTACTTTTGTTACTTGTATGCTTGTAGGGATCCCTCTCGAATCAGGGAAGAT CTTATCTGCACTTGCAACATTCCGGATTCTTCAAGAGCCTATTTATAATCTTCCAGACACAATTTCAATGATAGCACAAA CCAAAGTTTCTCTTGACAGGATTGCATCGTTCCTTCGCCTAGATGACTTGCCGACCGATGTTGTAGAAAATCTTCCTCGG GGTAGTTCTGATACAGCAATTGAAGTTGTGGATGGGAATTTTTCTTGGGATTTATCTTCCCCTAATCCAACCTTGCAAAA TATAAATCTCAGAGCTTCTCATGGCATGAGGGTTGCTATTTGTGGTACTGTTGGATCAGGCAAGTCTACTTTACTTTCTT GTGTGTTGGGAGAAGTACCAAAGATATCAGGTACCCTTAAGGTTTGTGGAACCAAGGCCTATGTTGCTCAATCACCATGG ATACAAAGCGGGAAGATAGAGGATAATATATTGTTTGGTAGAGACATGGACAGGGAAAGGTATGAAAACGTGCTCAAAGC ATGTTCCCTGAAGAAGGATTTTGAGATTTTGTCATTTGGTGATCAGACAGTTATAGGAGAGCGTGGAATAAATTTGAGTG GTGGACAGAAACAAAGGATACAAATTGCTCGTGCTCTTTACCAAGATGCTGATATATATCTATTTGATGATCCTTTTAGT GCTGTGGATGCTCATACAGGATCTCACCTTTTTAAGGTAACTCAATTTCATTGTTTTTGCTTATTATAGGTGAATCTCAG TAAAGATATAGTTTCTCAATAATATAATCCTAATTATATATTAGATATGTTTTCTAATATCAGTAAGTAGAGATATAGTT TCTCCTATACTCAAATTCTCATATACTTATTATGTGCAATGTAAAGTGGGTTATTATATTTTTTGAGCATACTACAAAAT ACAAATAGTTCTTAATTTAACTCTTTTGAAATGTAATTCTTTCAACAGCATGACACTTGAATAATTCTTTCCTTAAGTAA ATCTTTCTATTCTATTTGTGTGGCAGGAATGCTTGCTGGGGGTATTAAGTTCAAAAACAGTGGTTTATGTTACTCATCAA GTGGAGTTCTTACCTGCTGCTGACCTTATATTGGTGAGTATTTCTTATAATTTTACTGTCATTAATTTTAATTTTTTTTT TAACCTTGCATTACACCTTGTTGTCAGGTCATGAAAGATGGGAAAATTACTCAATGTGGAAAGTATGATGATCTGCTTAA CAGTGGGACTGATTTTATGGACCTTGTTAGTGCACACAGAAAGGCTTTGTCCACACTTGATTCAATGGATGGAGGGACAG TATCTAATGAAATAAGTACCATGGAAGAACAAGATGTAAATGTTTCTGGCACTCATGGTGATACAGAAAAAGAGGAAAAC AAAGGTGAGAAAAATGGTAAAGCAGATGACAAAGATGAACCAAAAGGGCAACTTGTTCAAGAAGAAGAAAGAGAGAAAGG TAAAGTTGGGCTTTCAGTCTATTGGAAGTATATCACAACTGCATATGGAGGAGCTCTTGTACCATTCATATTATTGGCTC AGATTCTTTTTCAAGCTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCTACTCCCATCTCACAAGATGTGGAGCCA CCTGTGGAAGGAACAACTCTTATAGCAGTTTATGTTGCTTTGGCCATCGGAAGTTCTTTCAGCATCCTTGTCAGAGCAAT GTTACTTGTCACAGCTGGTTATAAGACAGCCACTATGCTCTTCAATAAAATGCACTTCTGCATTTTCCGTGCCCCGATGT CATTTTTTGATTCCACTCCAAGTGGGAGGATCATTAACAGAGTATGTCAAACCCCTAACCTTTCCTTTTTTGCTTTTCTG ATTTTTAGAGATATATTTTTGCAGCTTAAATAACTTATAGCGTGTTTGGTTCTACTATGTGAAGCCACATTAACAATTTT GGGAAGAAGCTACGAAGTGTAGCTTCTGTACTTACCATGCTTTGGATTGTGCGTCACCCCACCAATCCAAATATGCTCTT AGTAGTCCCTCTGATCTTGTTAGTACTTTTTAAGCTCTATCTTACTGTCTGTTCTCTTGCAGGCTTCTACAGACCAAAGC GCAGTGGATACAGATATTCCTTATCAAATTGGGTCATTTGCCTTCTCCATGATCCAGCTGTTGGGAATTATAGCAGTGAT GTCTCAGGTTGCATGGCAAGTTTTCATTGTCTTTATCCCTGTCATAGCAATCAGCATTTGGTATCAGGTACTGTTTCGAC CTTGTAGGCTTTGATAATAAGGTGGAAGTGTGGCACATATTTCTTCCATTGCTCCCATTCTTGTCTGGCTAACATATATT AAACTTGTAATCTGCAGCAATATTATTTACCATCAGCCCGGGAACTGTCACGTTTGGTTGGTGTATGCAAAGCCCCAATC ATTCAGCACTTTGCTGAAACAATTTCGGGTACTTCAACCATTAGAAGCTTTGATCAGCAGAGAAGATTTCAGGAAACAAA TATGAAACTGACTGATGGGTATTCTCGGCCAAAGTTCAATATTGCTGGTGCCATGGAATGGTTATGCTTCCGCTTAGATA TGCTGTCTTCTATCACATTTGCCTTTTCCTTGATATTCTTGATATCTATTCCACAGGGTATTATAGATCCAGGTACATGA TTCAAATCTGGTATATGTTACCAATCAATTTTTACTCTGCTTATGCAATGAGAAGTTGAAATTTAATTTTCTGAATTTTG AAGGCATTGCTGGTTTAGCTGTTACCTATGGTCTTAATTTAAACATGATACAAGCTTGGGTGATATGGAATCTTTGCAAC TTGGAGAACAAAATTATATCAGTAGAAAGAATACTTCAGTATACTTCCGTTCCTAGTGAGCCTCCCCTTGTTGTAGAAAA CAATCAGCCAGATCCTTCTTGGCCCTCATATGGCGAGGTTGATGTACAGGACTTACAGGTAGCACATTATGCTACATTTT TCAGATTGCCCTCAAAATTGGGCTTTAGATACCACATTGTTCATAATCTAATTTTTACAAGATGTTTATGCTACATTTGT AATGATTTGTTGTTCATGATGAAGGTTCGTTATGCTCCACATCTTCCCCTTGTGTTGCGTGGTCTTACATGCACATTTCG CGGAGGACTGAAAACTGGCATTGTTGGGAGAACGGGCAGCGGTAAATCAACCCTCATACAAACACTTTTCCGACTCGTTG AGCCTACTGCCGGGCGAGTTATGATTGACAGCATCGACATCTCTCTAATTGGACTGCATGAGTTGAGGTCTAGACTAAGC ATTATACCACAGGATCCAACCATGTTTGAAGGAACAGTGAGAAATAATCTGGACCCCCTGGAAGAGTACACTGATGAACA AATATGGGAGGTGAGTTGGTGTTATTTGTTAAACAAATACATACACACTAGGTTCTTTCCAAAATATTGGACTTAACATT GTTTTTTAAATTAGGACACTTATGGAAGAGTTTATTTGAGTTTATCTTATAGCACAAACTCTTATGCAAGTCTTTGGATG AGCTTATGAAACAGTTTGTGACCTACATATAAACTATTTTGAGCTTATTTTTATAAACTGCTCAGATTAGCATATGAATT AGTTTTGATACCTATTTATAAGTTATTTTAAATTTATTTTAATAAGTTTCTCAAATTTTCTTCTGAATATGCGCTTATGT GATAAATGCTTATTGTTACTTTACTTAAGATGTTTTCCCGAACATACCTTTAGTATTGCTTTCACTCATTTACATTCTTT TGATATTTGTATAGGCCTTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTAGACTCTACAGGT TTGTATTCTATTTTTATTGAACATAGCGATATAGTACATCCAATCCTGAACTTGTTGCTAATGTGCTAGTACATTCTGCA GTTAGTGAGAACGGTGAGAATTGGAGCATGGGTCAGAGGCAGTTGGTGTGCCTTGGTAGGGTGCTGCTAAAGAAAAGCAA GGTTTTGGTGCTTGATGAAGCTACTGCATCAGTTGATACAGCTACAGATAATTTGATTCAGCAAACTCTTAGGCAGCATT TCTCTGAGTCTACAGTCATTACCATTGCACATCGAATAACTTCAGTCATTGACAGTGATATGGTTCTGCTTCTTAGTCAA GGTTAGGAAGACTGTTATTATTCTTTTTCTTTAAACTTTGATATTTTTCTCACTATCTTTCCCTTTTTATCACATCATCA TATATCACATCTATTACTTCTCTCTCTTCTCTTCCTTCTCTTCATTTCTCTCTCTAAGTATCTGTTAGGTGTCTGCACTA CGCGGATGTCTAAGAATCATTTTCCATTTTTTGTTCACTGGTGTTTCATTTTCTGATTTCTTGGGCAATGGTGCAGGACT TATTGAGGAGTATGACTCCCCAGCAAAATTGCTAGAGGACAAGTCATCATCTTTTGCTCAACTTGTTGCAGAGTATACCA TGAGGGCCAGCTCCAGTTTTGAGAAATCTGTAGAACATTGA
CDS sequence (LotjaGi1g1v0018500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCACTCTGCCACTGGCTTTTTCCTTGAACCCATTTTCCTTCATGGTTTATCTGGGTTCCTTCATCTACTGCTTATAGT GGCGGTTTTTGCATCATGGGTATGGAACAAATTCACATCTTATGCTAGTTCCAGTGCTAAGGTTGATGGTGGCGGCTCTA AGGAGAAAACAAACAACACTCTGTTTTCTGTGACTCTGTTTTGTTCTCTTGGTGTCTCTGCTTTCAACCTAGCTCTGTTA CTGTTCAACTACTTCTACTGGTACAGCAATGGCTGGTCAGAAGAAAAGCTCGTGACCCTTTTGGATTTAGCGCTTAAAAT GGTTGCTTGGGGTGTTGTTTGTGCTTGTTTCCTCAAAGGGTTCTCTAGAAGGTTTCCATTTTTCCTCTTCAGAATCTGGT GCGGTTTCTTCCTCTTTGTTTCATGTTACTGTTTTGCTGTGGATGTTGTTGTTATCTGTGAGAAAGACACTGCATTGCCA CCTCAGCATGTGGTTTCTGATGTGGTGTCTGCTATTGTGGGCTTGTTCTTCTGTTGTGTGGCTTTTGTTTTGAAGAATGA GGGTGGTGGTGGTAGTAACAGTGTCCATGAACCTCTATTGAAAGGGGATTCACAAGTTGGTAATGGTAAAGAGAGCAAAG GGAGTGACACTGTTACCCCTTTTTCCAGTGCTGGAATTTTCAGCATTCTTACATTTGCTTGGTCTGGTCCTCTTATAGCT GCTGGTTATAAGAAAACCTTGGACCTTGAAGATGTGCCTCAACTTGATTGCAGAGACAGTGTTATTGGAGCATTTCCAGG TTTTAAGGAAAAGGTTGAGAGTGATTTTGGTGGAATTAACACCTTGACCACACTTAAGCTTGTTAAGTTATTGATAATCT CGGCGTGGAAAGAGATTCTCTTCACTGCTTTTCTTGCATTGTTGAACACTTTGGCTTCTTATGTTGGTCCTTATCTCATT GATGGTTTTGTTCAGTACCTGGATGGACGGAGGCTATATGAAAACCAGGGCTTTGTTCTGGTTTCTGCATTTTTCTTTGC GAAAATTGTTGAGTGTTTGTCACAAAGGCATTGGTTCTTTAGGTTGCAGCAAGTTGGACTTCGAATCCGAGCATTGCTTG TGACAATGATTTATAACAAAGCCTTGACCCTTTCGTGTCAATCGAAGCAGGGCCACTCTTCTGGGGAGATAGTCAATTTC ATGACTGTGGATGCTGAAAGAGTTGGTGTGTTCAGTTGGTATATGCATGATTTGTGGATGGTGGTACTGCAGGTTTCATT AGCCCTTGTGATTTTGTATAAGAACCTTGGTGTTGCTGCAATCGCTGCTTTTGTTGCAACCATCATTGTTATGTTAGCCA ATGTTCCCTTGGGATCATTGCAAGAGAAGTTTCAAAAGAAGTTGATGGAGTCAAAAGATAAGAGAATGAAGACCACTTCT GAGATTTTAAGGAACGTGAGAATCCTCAAACTGCAAGGGTGGGAAATGAAGTTTCTATCTAAGATAACTGAGCTCAGGAA CACTGAACAAAACTGGTTGAAAAAATATCTGTACACAGCAGCCATGACTACATTTGTGTTTTGGGGTGCCCCCACATTTG TTTCCGTGGCTACTTTTGTTACTTGTATGCTTGTAGGGATCCCTCTCGAATCAGGGAAGATCTTATCTGCACTTGCAACA TTCCGGATTCTTCAAGAGCCTATTTATAATCTTCCAGACACAATTTCAATGATAGCACAAACCAAAGTTTCTCTTGACAG GATTGCATCGTTCCTTCGCCTAGATGACTTGCCGACCGATGTTGTAGAAAATCTTCCTCGGGGTAGTTCTGATACAGCAA TTGAAGTTGTGGATGGGAATTTTTCTTGGGATTTATCTTCCCCTAATCCAACCTTGCAAAATATAAATCTCAGAGCTTCT CATGGCATGAGGGTTGCTATTTGTGGTACTGTTGGATCAGGCAAGTCTACTTTACTTTCTTGTGTGTTGGGAGAAGTACC AAAGATATCAGGTACCCTTAAGGTTTGTGGAACCAAGGCCTATGTTGCTCAATCACCATGGATACAAAGCGGGAAGATAG AGGATAATATATTGTTTGGTAGAGACATGGACAGGGAAAGGTATGAAAACGTGCTCAAAGCATGTTCCCTGAAGAAGGAT TTTGAGATTTTGTCATTTGGTGATCAGACAGTTATAGGAGAGCGTGGAATAAATTTGAGTGGTGGACAGAAACAAAGGAT ACAAATTGCTCGTGCTCTTTACCAAGATGCTGATATATATCTATTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAG GATCTCACCTTTTTAAGGAATGCTTGCTGGGGGTATTAAGTTCAAAAACAGTGGTTTATGTTACTCATCAAGTGGAGTTC TTACCTGCTGCTGACCTTATATTGGTCATGAAAGATGGGAAAATTACTCAATGTGGAAAGTATGATGATCTGCTTAACAG TGGGACTGATTTTATGGACCTTGTTAGTGCACACAGAAAGGCTTTGTCCACACTTGATTCAATGGATGGAGGGACAGTAT CTAATGAAATAAGTACCATGGAAGAACAAGATGTAAATGTTTCTGGCACTCATGGTGATACAGAAAAAGAGGAAAACAAA GGTGAGAAAAATGGTAAAGCAGATGACAAAGATGAACCAAAAGGGCAACTTGTTCAAGAAGAAGAAAGAGAGAAAGGTAA AGTTGGGCTTTCAGTCTATTGGAAGTATATCACAACTGCATATGGAGGAGCTCTTGTACCATTCATATTATTGGCTCAGA TTCTTTTTCAAGCTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCTACTCCCATCTCACAAGATGTGGAGCCACCT GTGGAAGGAACAACTCTTATAGCAGTTTATGTTGCTTTGGCCATCGGAAGTTCTTTCAGCATCCTTGTCAGAGCAATGTT ACTTGTCACAGCTGGTTATAAGACAGCCACTATGCTCTTCAATAAAATGCACTTCTGCATTTTCCGTGCCCCGATGTCAT TTTTTGATTCCACTCCAAGTGGGAGGATCATTAACAGAGCTTCTACAGACCAAAGCGCAGTGGATACAGATATTCCTTAT CAAATTGGGTCATTTGCCTTCTCCATGATCCAGCTGTTGGGAATTATAGCAGTGATGTCTCAGGTTGCATGGCAAGTTTT CATTGTCTTTATCCCTGTCATAGCAATCAGCATTTGGTATCAGCAATATTATTTACCATCAGCCCGGGAACTGTCACGTT TGGTTGGTGTATGCAAAGCCCCAATCATTCAGCACTTTGCTGAAACAATTTCGGGTACTTCAACCATTAGAAGCTTTGAT CAGCAGAGAAGATTTCAGGAAACAAATATGAAACTGACTGATGGGTATTCTCGGCCAAAGTTCAATATTGCTGGTGCCAT GGAATGGTTATGCTTCCGCTTAGATATGCTGTCTTCTATCACATTTGCCTTTTCCTTGATATTCTTGATATCTATTCCAC AGGGTATTATAGATCCAGCTTGGGTGATATGGAATCTTTGCAACTTGGAGAACAAAATTATATCAGTAGAAAGAATACTT CAGTATACTTCCGTTCCTAGTGAGCCTCCCCTTGTTGTAGAAAACAATCAGCCAGATCCTTCTTGGCCCTCATATGGCGA GGTTGATGTACAGGACTTACAGATACCACATTGTTCATAA
Protein sequence (LotjaGi1g1v0018500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHSATGFFLEPIFLHGLSGFLHLLLIVAVFASWVWNKFTSYASSSAKVDGGGSKEKTNNTLFSVTLFCSLGVSAFNLALL LFNYFYWYSNGWSEEKLVTLLDLALKMVAWGVVCACFLKGFSRRFPFFLFRIWCGFFLFVSCYCFAVDVVVICEKDTALP PQHVVSDVVSAIVGLFFCCVAFVLKNEGGGGSNSVHEPLLKGDSQVGNGKESKGSDTVTPFSSAGIFSILTFAWSGPLIA AGYKKTLDLEDVPQLDCRDSVIGAFPGFKEKVESDFGGINTLTTLKLVKLLIISAWKEILFTAFLALLNTLASYVGPYLI DGFVQYLDGRRLYENQGFVLVSAFFFAKIVECLSQRHWFFRLQQVGLRIRALLVTMIYNKALTLSCQSKQGHSSGEIVNF MTVDAERVGVFSWYMHDLWMVVLQVSLALVILYKNLGVAAIAAFVATIIVMLANVPLGSLQEKFQKKLMESKDKRMKTTS EILRNVRILKLQGWEMKFLSKITELRNTEQNWLKKYLYTAAMTTFVFWGAPTFVSVATFVTCMLVGIPLESGKILSALAT FRILQEPIYNLPDTISMIAQTKVSLDRIASFLRLDDLPTDVVENLPRGSSDTAIEVVDGNFSWDLSSPNPTLQNINLRAS HGMRVAICGTVGSGKSTLLSCVLGEVPKISGTLKVCGTKAYVAQSPWIQSGKIEDNILFGRDMDRERYENVLKACSLKKD FEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGVLSSKTVVYVTHQVEF LPAADLILVMKDGKITQCGKYDDLLNSGTDFMDLVSAHRKALSTLDSMDGGTVSNEISTMEEQDVNVSGTHGDTEKEENK GEKNGKADDKDEPKGQLVQEEEREKGKVGLSVYWKYITTAYGGALVPFILLAQILFQALQIGSNYWMAWATPISQDVEPP VEGTTLIAVYVALAIGSSFSILVRAMLLVTAGYKTATMLFNKMHFCIFRAPMSFFDSTPSGRIINRASTDQSAVDTDIPY QIGSFAFSMIQLLGIIAVMSQVAWQVFIVFIPVIAISIWYQQYYLPSARELSRLVGVCKAPIIQHFAETISGTSTIRSFD QQRRFQETNMKLTDGYSRPKFNIAGAMEWLCFRLDMLSSITFAFSLIFLISIPQGIIDPAWVIWNLCNLENKIISVERIL QYTSVPSEPPLVVENNQPDPSWPSYGEVDVQDLQIPHCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 11 | 11 | - | – | |
Phobius | 12 | 35 | 24 | - | – | |
TMHMM | 13 | 35 | 23 | - | – | |
Phobius | 36 | 60 | 25 | - | – | |
PANTHER | 43 | 1236 | 1194 | 0.0 | – | |
PANTHER | 43 | 1236 | 1194 | 0.0 | – | |
Phobius | 61 | 85 | 25 | - | – | |
TMHMM | 66 | 88 | 23 | - | – | |
Phobius | 86 | 96 | 11 | - | – | |
Phobius | 97 | 118 | 22 | - | – | |
TMHMM | 98 | 120 | 23 | - | – | |
Phobius | 119 | 129 | 11 | - | – | |
TMHMM | 127 | 149 | 23 | - | – | |
Phobius | 130 | 152 | 23 | - | – | |
Phobius | 153 | 163 | 11 | - | – | |
Phobius | 164 | 184 | 21 | - | – | |
TMHMM | 164 | 184 | 21 | - | – | |
Phobius | 185 | 298 | 114 | - | – | |
MobiDBLite | 197 | 216 | 20 | - | – | |
Gene3D | 287 | 594 | 308 | 1.0E-20 | ||
SUPERFAMILY | 293 | 600 | 308 | 1.44E-33 | ||
Phobius | 299 | 320 | 22 | - | – | |
TMHMM | 299 | 318 | 20 | - | – | |
Pfam | 300 | 566 | 267 | 3.8E-24 | ||
ProSiteProfiles | 300 | 580 | 281 | 33.773 | ||
CDD | 301 | 588 | 288 | 1.50078E-106 | – | |
Phobius | 321 | 331 | 11 | - | – | |
Phobius | 332 | 353 | 22 | - | – | |
TMHMM | 338 | 360 | 23 | - | – | |
Phobius | 354 | 410 | 57 | - | – | |
TMHMM | 410 | 432 | 23 | - | – | |
Phobius | 411 | 433 | 23 | - | – | |
Phobius | 434 | 438 | 5 | - | – | |
TMHMM | 436 | 458 | 23 | - | – | |
Phobius | 439 | 460 | 22 | - | – | |
Phobius | 461 | 912 | 452 | - | – | |
TMHMM | 525 | 547 | 23 | - | – | |
Gene3D | 600 | 856 | 257 | 3.9E-74 | – | |
SUPERFAMILY | 611 | 836 | 226 | 1.22E-56 | ||
CDD | 614 | 814 | 201 | 4.91889E-109 | – | |
ProSiteProfiles | 614 | 837 | 224 | 22.149 | ||
Pfam | 632 | 766 | 135 | 9.4E-20 | ||
SMART | 641 | 814 | 174 | 2.3E-12 | ||
ProSitePatterns | 739 | 753 | 15 | - | ||
MobiDBLite | 859 | 902 | 44 | - | – | |
MobiDBLite | 868 | 902 | 35 | - | – | |
Gene3D | 887 | 1210 | 324 | 1.6E-35 | ||
Phobius | 913 | 936 | 24 | - | – | |
TMHMM | 917 | 939 | 23 | - | – | |
SUPERFAMILY | 926 | 1210 | 285 | 2.49E-50 | ||
CDD | 926 | 1203 | 278 | 1.63673E-84 | – | |
ProSiteProfiles | 928 | 1183 | 256 | 35.054 | ||
Pfam | 928 | 1169 | 242 | 4.8E-30 | ||
Phobius | 937 | 966 | 30 | - | – | |
TMHMM | 966 | 988 | 23 | - | – | |
Phobius | 967 | 993 | 27 | - | – | |
Phobius | 994 | 1037 | 44 | - | – | |
TMHMM | 1038 | 1060 | 23 | - | – | |
Phobius | 1038 | 1056 | 19 | - | – | |
Phobius | 1057 | 1061 | 5 | - | – | |
Phobius | 1062 | 1080 | 19 | - | – | |
TMHMM | 1062 | 1084 | 23 | - | – | |
Phobius | 1081 | 1161 | 81 | - | – | |
Phobius | 1162 | 1184 | 23 | - | – | |
TMHMM | 1162 | 1184 | 23 | - | – | |
Phobius | 1185 | 1239 | 55 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0018500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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