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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0027200 |
| Transcript ID | LotjaGi1g1v0027200.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA mismatch repair protein MutS; TAIR: AT3G20475.1 MUTS-homologue 5; Swiss-Prot: sp|F4JEP5|MSH5_ARATH DNA mismatch repair protein MSH5; TrEMBL-Plants: tr|K7M4I0|K7M4I0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0027200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:3298370..3308232) extracted from Lotus japonicus Gifu genome v1.2.
AAGTCCTTGATTGGAAATTTGGACTTTGTGCAGGTTTACATGGCTTGCATCCAAAACGGTCATAGGTAAGATTCTTTTCA TAGCTCAAATATTTGTTTCAGTGTTTCCTGATATTGCAGGCCAATCTTGCATGGAAATATGAGTCCTAGGACCTGGGAAT ATTTCTTTCTGATTTTGAATTGTGCATTTTCTGTTTGCTGAGTTCTTTCACTGTTCTTTACAGAATAGGAGTTTCTTACT ATGATTCCGGCCTCCGCCAACTTTATGTGCTTGAGGTTTGGGATGATGGTGATAAAGGTTTTCCAGTTATTGATTTGGGT ATGGTTTCTTTTGTTATCATTTGATGAATTAGAGTTCAGTTTTAGTTTCTATGTTCCATCTTGGTGCAATGTTCCATGAT AATTGAAACTTTAAACTAACTACTAAGAGCATTGACGTGCCCTTTTTTACCCTTGTTCTGTTATTACAGTTCATATACCC CTACTGACTTCAACTTGAAAACCCCTACTGTGACTTCAACTTGAATACTTTTCTTATCAGTTATAAATTGTAGTTTATAA GGGTCTTTTGGCTTCAATAACTGGTGCAGTGAAATATCAAGCAAACCCTTTGGTCATTTACACAAGCACTAAATGTGAAG AATCCTTCTTGGCTGCTCTGGAACAAAGTGGTATAGTGCACATCATGTGGTTGAGTTATGAAAGACTAGCTGTGGGACCC TTTTACCTACTGAAGTTTTGCAGATGAAGCAGCTGAGGCTCCTACAGTAAAGCTCATGAAAAGTTCAATATTCAGTTATG AGCAAGCATGGCATAGGTATTGAAACTGCTAAGATCTTAAAAGATAAATTTTTAGTTGAGTGTTTGCAGTGTAGTTATCA ATGGCATATTGAATTAGTGAATTTTGGTACACATTGCGTTGTGTAGATCTTTCAGATTCTTAATATTTTGGATATTGAAA TTTGTTTAATTGTTGTAAGCTATGAATGACAAAAACTTATCATGCTCGAAGACACACCCACACAATGAAACGGTGACGTA GGAACCTACCTTCCGTTTGAAATTAGGGTATTAGGGTCAATTTTCCAGCATATAGTTCTCGTCATTGCCTCTCTTTCTCA AACTAGAAAATTTTCTCTTTCTCTATTTTTCAGCTTCAGCCAGGTGAAGCTAAAGTCTTAATAAATTTGATCTTTTTTTA AGTTGTTTTAATCAACATGCATAATTTTCGTTGTGATTTCAAAGGAGGCTATTATGATAAATGATATCTTTCATTTGGTG AATTGTCAACTCTTCTCGATCCAAAGGAAAAACAAAAAGGTGCTTTGCAATTTTAGCATTCTACATGATTTGACATGATT TTAACAAAAAGGTGCTTCTCGTTCCTCGTGAATTTACAGATTAATTTACCTTCGGGTGGCGGGGATGGATGATGGATTAA ATGTCAAGGAGAGGATTTATTTTGTGAGTCTGAAGCTACCTACTATTCTGATTTATCATTTTTGTCTCAGAATACCATGA TAATGGATTGTCCAAGTACTTCGCTTATTAATGCGTACTTAGATTAGAGATGAAAATATTGGTTCTTCAAATATTTATTT CTTGTATTCAGTTTTGTGTGGGAACATCTTTCCTATCCTTTCAATCATTAGTGCAATACTCTAACAGCTTTACATGTCTC CCCCCCCCCCCTTACCTCCCTGTTGCAACTGCAGTTAAGTTCCATGATGAACATGGAAAGTGAAGTACAAGTTCGTGCTA GCGGTGGCCTTCTTGCAATTTTAGAGAATGAAAGGATTGTAGATACTCTTGAGCAAAAAGAATCTGGCAATACATCAATC ACAATAGATTCTGTAGCAGAGATTTCACTGTATCCTTTCATTATTTAACTCGGTCCTGAAAGGCAACCCTTCTTGTACTT TTCAACTTTGTGCTGCTTGAAAGGAGATAATGCTGGGTAACAATTGTCCTTCTTTAAAATGGAGATGCAGAAATAACTTC CTCAAACTTGATGCAGCAGCTCATGAAGCATTACAAATATTCCAAATAGACAAGCACCCAAGCCACATGGGAATTGGGAG AGCAAAAGAAGGGTAATTGCTGCCTTACTCAAAGATATTATAATTTGAAATTTGTGTAAATATCCTAGATAATATGTCTT ATTTGCAGGTTTTCTTTGTTTGGAATGATGAATAAGGTTTGTTGGAGTTGTTTAAATTCAGTTTAGCAAGTGCAGTTTCT TGCAACACATGAATGATTGTTTGTCCTGTATGCAGTGTGTGACTCCAATGGGTAGACGCCTTTTGAGGTAACACGTACTA AAACTTGTGAGATCAATAATGTACTTACCACTCAAAATTGAGAGCAAATGGTAATGTTTTTCTCATTTTCCCCATTTCAG GAACTGGTTCTTGAGACCTATACTTGATCTTGAAGTTCTAAACTACCGCTTAAATTCTGTATCCATTTATAGTCAAGTAT ATAATTACTATGCTTTACTAATATTCACGATCGTAATTCAGGTCGGATGAAATATCTACTTATTGTCCTTTGTAGGTGGA ATATTGAACTAGCTATTTAGTATAAAGTAAGAGTTTTCTTTAATGGGAAATAGATATCTTTCTTTCTCTGCTCAGAAGAA CTGGTTGTTTCATTACGTGAAACCCTGAAATCTGTAAAGGACATTCCCCACTTGCTGAAGGTATGAATATTGTCTCCCCC TCCCCCCCCCCCCAAAAGTCTTTAATAAATTTTGTTTTCTTTTTTGTTCTTCTACTTGTCTGGCTACAAGTCCCTTCCAT TCATGAAAGCTTGTATTCGTAGTATACTAATACTTCTAAAACATTTCAATCATTAAAGAAATTTGACTCTCCAAGCTCCA TATGCACCAGTACTGATTGGACAGCTCTTCTGAAGGTGAATTTATCTTTTATGCCTTATTGCTTTCTAATATTGTCTTGT TCCCTTGTGTTGTTTAAATCTATGTACTATGTTGCTTCTACCTTGTAAAAATAAATCTATAATGTTTTATTCTTTGATTT TATTATTAGAATTTGGGAGGCCTAACTCAACCCAAAAGCTAGCTCAACAGTTGAGGGTCGCTCTACCCTTATAAAGGCTA TATATGCCATATCTCTAGCCAATGTGGGATTCTAACATTTATATTTACATGAACCCTAGTGTCCTTGAGGAAAAATTAAA AAACATAGAATTCTTAACACTTAGTTCGTATGTTATTAGTTGCCTGAAATCAAAGGTTCATAGAAATTCCCCTCCCTCAA ATGGTTCCTATTTTCTATTTGTCTTTGCTTGTAAGCAATGACAAAGGAAGAAATCCTGCAGTTGGACAACTGACATGGTA CAAAATTGTCGCAAACATGAGAAATATTGAGCTCAAGCTGTTATGTTACTGAGAGGTGGGGGGAAATTTTGAACCGGTTA AATGATAGGTGAATGTATAAAGTTAATAGTATCTTTAACTTATTTTTTTTGATAGGCAAATGTTAGTTGTTAGTAAATTA GTTCTCCTCAGGATTCGAACCCTGGACCCTTCACCCTTTACCCTCCCAAACCCTTATGTCCCTATCTTTAACTGTCTGGC TTGTATTTGTATTTCCACTTCAAGAATAGCCTCTTTAATTTGTGATATAAACACAATCATATCAACATGAGAATTATTTG AATGTCATTGTTTATAAAAAAATGGATAAGATTTTTGTTTTCTTTTTCATAGCTCTCCTGGATTATCCATTATTGGTGTT GTTTTCTTTTTCATATTTCCATATTGGGCACTTTTTAATTAATGAATCCATTTGACACATAAACAGTGTAATATTGAGAG GATACCTTTACTTGTAGAATGAACATAACAATTTAATATATTTTCTTGTGCAATTCAAAAACTGATTACCATCTGGAAAT TTGCGGGAAATATGACGTTTTGTTTTGGGCTCTAGAACTGTTTTTTTAATCATTTTTTGTTTACCTTTTAGAGTATTTGT GCTCTCTTGCATATAAACAAGATATTTGAAGTTGGAATTTCTGAAGCTCTTCAAGAAGAATTGAAGTACTTGAACTTGGA TATTATTGAGAAGGTACATATCCGTTATAATCAAGTGGACTGGTTAGGTTCTAGTTTGAATGATTTTTTCATGCACAACA ATACTGCAGGCAAGTTCCTACATAACAACAGAGCTTGCTTATGTCTATGAGCTGGTAAGTTTTATTTGCCTCTCTCCTAC TGATTACCAGAAAGAAAAGCAAAAAATGACTTGTGTATTATGATGCTTCTTTAACTAGTTTGGGTGAGCCATTGCGGTTT TTCCTTCATTTGGTACTGACATTGTATTTTGCAGGTGATTGGTGTTATTGATGTAAATAGAACTAAAGAGAAGGGATATG CTACAGTGGTGAAAGAAGGTTTCTGTGATGAGGTTAAGCCCAAGTTCGTCATTCTTTTCTTCACCTTAGCATGTCTATAT AACTAATTTAGGTAATATGCGTATGTAGTTCAAGTTGAAAAATCATGTATTATTCAAATTGTTTTTTCACGTATTTGCAT AGTTGGATGTGATTTTTGTCAAATGAATTAATCCATAGATGTTAATGTTTAATCAATGCACAACATTTTATTCCTTCATG AGGTAAGCTTTGTTTTCACTGTGATTAACATATAGTTTTTGGTCTGGATAAATTATTGGTATGTAGTTGGATGAGCTAAG GCAAATATATGAGGAAATGCCAGAATTCCTGGAAGAGGTAGCTTTTGGTGCAAATTTTAATTGAGTAAAACACACACATA CACATTGTCATTCATCATGATACATTTTTTGCAGGTTTCATCTTTGGAACTTGCACAACTCCCTGTTCTACACAAGGACA AGCCTGTTCCGTGTATTGTTTATATACAGCAAATAGGTAGTTCTGACTCTGAATTATATATATATATATATATATATATT ATATTATATATATCCAGAAAATGTGGTATATTTGCTAATAGGAAGCTTTTATTTTTGAATCAACTATTTCGTACAAGGTT ATTGCTATGTCAACATACTTTCGTTGCCCTAATATTTGTTGAAATATCGTACCAAGTACCAACTACTACTAACACGTCTG AGCTGAAGGTAAATAGAGTTTTAGACTGAGGTCCTTGGCCCAAATCACCACCAGTGTCATCATGTTACTCTTGTGTTTAA ATCCCACCACAGCCTGCCATTTGTTTTTTTCCCTCTATCTGGAGAGACCCCAATCCCCCTATTTCCTGTCCCAAGCTGTA GACCTCATACTATAAGCAAGAAAATAAGAAAATGAGCAGAGTATCCAAGAGTAAATAAGCTTTAATGATTTAGGTGAACA ATGAACTCAGTTGAGTGTCTGGATTCTTTAGTTAACCGGTCACTGTATCTGGATTAAAAATAAAAATCAGAGAGTTTAAT AGTTTATTTGCTGTCATATAAGCTTGTGTAGAAGTCTAATAGCTTTTATTGTACAATTTACTCTTACACCTAATTTACTG TAGTGTTTCATCTGTGTCTTCTTTTCATGCAAAATTAAATCTTTTCTGTGCTCGAGCTCTTCCTCCTTGAGTCTTCGAAA TTTAGTGTAGACTTGTCAAGGATGACGAGATGTCATCTTATTAGTCCAATGTTGATTGTTCTCAAACATATAGGTGTGAC ATCCATATACTTGAACATTTAATTACTGCATATTAATTTTTGTTTACACTTCACTGTAGGATATTTGATGTGCTTCTTTG AAGAAAAACTTGAAGAAACTACTCTGAAGGAGCTTGTAGATTGGGAATACACAGTATGTTGGTCTTTGCACTTTGGCTAA GTAATTTAGTAATTAAATATATTCTATTTTGATGATAATCATTCCCAATATAGTTTTGTGATGCAGATGGAGAGACAAAA AGATATTTTTATCGTACACCGAAGACACGAGAATTGGACAGTCTTCTAGGCGATATCTATCATAAAATTCTAGGTAAAGC ATATATTTGATATTTCCCTGGTGGGTGTGTTCACTATATTCAGAAAATTGGATAACAAGATACAATACAACCAATTTAAA ATTGCTAGGTGAGACCTTAGGCCGGGGATGATAATCAAGTAAAGACCTCTCCGTATGGTGACTTCAGGACTCAAACACCT AACGTTGTTGATAAAGTTTGTTGGAGGCCATTTAAAAGGAAAAATAAGATATTATAGTAATCGATTGAAGTGGTTAGAAT TCTATTAATGTCATAATTTATGATACATATGCATGTACTAAATCATTGAGTTTTTAATCAATGGTTATAACCCTAAATAA AACTAGATTATAAGTAGACCATGCATTATTGACACAAGACATTATAGCTCAAAAAATATGAAATTCCTTGACATGCAGTT AAGAGCTTGGAGACATTACCTAGAATGTTGAGCGCCTTCAGAGTTTTAATACTGGTTTCTACTCTCTGGTGCTAATATTT TTGAATCCTCTTATTTAAGATATGGAGAGGGCAATCACCAGAGACTTGTTTTCACGTGTACTATTATTCTCAACCCATTT GATAAAGGTGGCAACTTTTGCAGCTGAACTGGATTGGTAAGATAAAGTTTCTTATTATTTTAACAGTTGCTTGCCCAGAC ATGTTCATGGTTGATATATATTTTTTTTCCACAGCTTTTTGTCAATGACATTGGTTGCCAGGCAGAACAATTATGTCAGG CCTTTGTTGACTGAAGAAAACTTTCTAGAAATTAAAAATGGAAGGTTCAAACCATCTAGTTGATATAGAATCTCTTGAAA ATGAAGAACTATTGAAAGGATTAATGATACGAATTGGTTTTGTTTGTAGGCATGTTTTGCAGGAAATGACTGTAGACACA TTTATTCCTAATGACACCAAGATGTTGCATGATGGTAAAACAGATTTAAATAAAATATGTATAGCTGATCTAAGTTATAT TCTAGAAATCCAATTTGATCATATTATATTGTTTAATTCCTGTTCAATTGCTCTTTACTTCAGGAAGAATTAATATTATC ACTGGTCCAAATTTTTCTGGGAAGAGCATCTATATAAAACAGGTCATTTATTTGTTCTTTATCTTTCTCGGATATGTATT CTTGTGAGTGACTGTGTTAAAGACCAAAGATAAAATTCTCGGTTTCCATAGAACAGTTCTGTGGATACTTGTTTCTTGAC ATACAGTCTAATGTGTAGCTACTAAATGATGTTCGATTCTTAATCCTTGGTGCTCTATGTTCACAAAGTAATGATTTAAT TTTTTTGCAGGTGGCTTTAATTGTTTTCCTCTCCCACATTGGTTGTTTTGTTCCTGCTGATGCTGCAACCGTGGGTCTTA CTGATAGGTGTACTTTCTTATGACCATGTATTTTGTGAGACTGGTATTTGTTTGTTAATCTTACCATTTCTTAACATTAT CAGTCCTTTTCCTTTGAATTTTTGGGGGGGGGGGGGGGGGGGGGCGTTATTACAGAATATTTTGCGCAACAGGAAGCAGA CTTATGACTGCAGAACAATCAACATTTATGATTGATCTACATCAAGTTGGGATGATGCTTAGGTATGCCGAGAGAAATTC TGATCAGGATAGCTCTAATACATTGAACTAAGACTGGTCATGGGCTAAATGACTAAATCTGTATGATCACATAGTATTTG TACTATAATGTCGTTTTATAGTTGCAGATGTTTTTCTGAACGCTTTTATCTGAACAAATAAATAAATGAGTGATTCCAAG AGAATACAGTCCACTAAAATAACACATACGCGTACATATATTTGATGTGAAGAAAACCTGCAGGCATGCCACTTCACGAT CTCTGTGTCTGGTGGATGAATTTGGCAAGGGTACTCTTACAGAAGGTCAGTTTCTGCGATGATTACGAAGTGTCTAAATT ATAAATATTTAAAATATGTGTGTGGGTTTTACAAAGACTCAGCATCTATATTTTGATCACCTTTCAGATGGCACTGGTCT GCTTGCTGGGACCATAAATCACTTTGTCACGTATGATGAACCCCCAAAGGTTTAAGACTTTATCCCCTAAAATATGTGCA TTTTATCTGTTTACTTTTCCTTCAAATTTGAAAATCGATGTAATTTTTTATTATGATATTCTTTTGGTGATGGGCCATGT TCAGGCATTTTATCATTACTTGTTCATGGGCTACGTTTTCCTCTTTACTGGAAGCCAATTTTCAATTAGATTTTCTATCT TAATACATAGATTCAGCCTCTAAATCATTCAAATTTCGTAGATGATATGGTTTTTTACATATTCATAGGTTTTTCTTCGT TGCGTATCTTTCATTTTCTTTCACATTTATATGCTTTTATCAAATTTGTACTTCAGGGATTAATTTTGTCCATCAAACTT TGAATCCACTCTAATATAATAAATTTAGAGATGATTTCAATATGGGATCCCGTAGGCTGATCCATTGCTCTACCGTCTAC ATTTAACTGCCTATGGTAGTTACAAGTAGAAAATAATTAGTGGCCGAGCTCCTTAGTGACGGTTATGATTAGGAAAATGG CATGTCAAGATATAACTTAAGGAACCTCCTGCTAGTTGACATCATTCTTGATTGCTTCTGCAATAGCTCTTTATATGTAT ATAAATTTGTAAAATATGAGATTTTCATATATTGTGATTGTGGCTTACAAATCCTTCTCTTCCTCTTTATGTATTTCTCT ATTTCACTTCTCATATTCTGTTTTTCTCTATCTCTTATATTTTATATCATCGTAAAAAATTTCTCGTAGTTTGTTTCAAC TGTAGAACATATTAACCGTACATTTCTACTTTGCTAAGTTAATTGGTATAATTTGTTAATTTTTTCAGCTGAGATTTGTT AATATACATGTTGACTGTAGTTCCATAAATGATTGCATTATGCTTTTAGTTTCTTCATGGCATTTTCACACCTTTGTGCT GTCAGTTGCCCTTTGTTTATTAAACTATATACTTACAAGTTACAACTGTATCCAATCCCTATGTAGGTCTATTTTTGTTA TTTCTATAAGTAACTGGTGAAGGTTTATTCCTTATGATTGTAAAAGTATGAACCAATCAATGTTCAGTAATCGTGAGACT AGAAGTTAAAAGTTCGTCCCTTTATCTATGTTGAAAGTAAACTAGTAACTTCAAGAAGTTTTGGTATATTCGTAAGCACC AGTTTTGAGGAAGTAGTTATTGAAGACAATTCCCCTGGAAACCTTATGTAAAGGAAATTTCAATTGGAATGCATAATTAC AAGACTGGTGAAATGAATATATGCAGTTATTATTTTGAAAACCAATAAGAACATTTACATGAGAGATAATTATCATTGGT TATATGAACTTTGCAGGTTTTTGTGTGCACTCATCTCATGGATTTATTGCATGGGCATTCCTTGACTAAGGTTATCCACT TATGCTTGTGCATCATAGTGGATTTGAAGTTTTGAACTCAATGGAGTGATCATGAACATAATTTCTTTGGATATTTCAGT CTGAGCAGATTATGTTTTACACAATGAGTATACTGAGACCTGACGAAAGTTCCACCCAAATTGAAGACATCGTATTCTTA TATAGGTAACTTTTATTGGTTCTGCCATGCTCGATGCGGTCTATGAATTTGATAGCAATTCTGTTGTACTTGATCAGGCA ATTTTTCGAACACATTTACAAACCTAATAAATGAAACCTTTTCGTCGAAGACTTTGGAAGTGGAAAACTGAACGGGGAAT ACCAAAATTTGTATATTCTAAAATGCATTTGTTTCAATTTGCTCGTCCTGATATACAATAATCTTCCAAGAATGATAGTA TTTGGTTTATTCAATGATAATGA
CDS sequence (LotjaGi1g1v0027200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTGCATCCAAAACGGTCATAGAATAGGAGTTTCTTACTATGATTCCGGCCTCCGCCAACTTTATGTGCTTGAGGT TTGGGATGATGGTGATAAAGGTTTTCCAGTTATTGATTTGGTGAAATATCAAGCAAACCCTTTGGTCATTTACACAAGCA CTAAATGTGAAGAATCCTTCTTGGCTGCTCTGGAACAAAGTGATGAAGCAGCTGAGGCTCCTACAGTAAAGCTCATGAAA AGTTCAATATTCAGTTATGAGCAAGCATGGCATAGATTAATTTACCTTCGGGTGGCGGGGATGGATGATGGATTAAATGT CAAGGAGAGGATTTATTTTTTAAGTTCCATGATGAACATGGAAAGTGAAGTACAAGTTCGTGCTAGCGGTGGCCTTCTTG CAATTTTAGAGAATGAAAGGATTGTAGATACTCTTGAGCAAAAAGAATCTGGCAATACATCAATCACAATAGATTCTGTA GCAGAGATTTCACTAAATAACTTCCTCAAACTTGATGCAGCAGCTCATGAAGCATTACAAATATTCCAAATAGACAAGCA CCCAAGCCACATGGGAATTGGGAGAGCAAAAGAAGGGTTTTCTTTGTTTGGAATGATGAATAAGTGTGTGACTCCAATGG GTAGACGCCTTTTGAGGAACTGGTTCTTGAGACCTATACTTGATCTTGAAGTTCTAAACTACCGCTTAAATTCTATATCT TTCTTTCTCTGCTCAGAAGAACTGGTTGTTTCATTACGTGAAACCCTGAAATCTGTAAAGGACATTCCCCACTTGCTGAA GAAATTTGACTCTCCAAGCTCCATATGCACCAGTACTGATTGGACAGCTCTTCTGAAGAGTATTTGTGCTCTCTTGCATA TAAACAAGATATTTGAAGTTGGAATTTCTGAAGCTCTTCAAGAAGAATTGAAGTACTTGAACTTGGATATTATTGAGAAG GCAAGTTCCTACATAACAACAGAGCTTGCTTATGTCTATGAGCTGGTGATTGGTGTTATTGATGTAAATAGAACTAAAGA GAAGGGATATGCTACAGTGGTGAAAGAAGGTTTCTGTGATGAGTTGGATGAGCTAAGGCAAATATATGAGGAAATGCCAG AATTCCTGGAAGAGGTTTCATCTTTGGAACTTGCACAACTCCCTGTTCTACACAAGGACAAGCCTGTTCCGTGTATTGTT TATATACAGCAAATAGGATATTTGATGTGCTTCTTTGAAGAAAAACTTGAAGAAACTACTCTGAAGGAGCTTGTAGATTG GGAATACACATTTTGTGATGCAGATGGAGAGACAAAAAGATATTTTTATCGTACACCGAAGACACGAGAATTGGACAGTC TTCTAGGCGATATCTATCATAAAATTCTAGATATGGAGAGGGCAATCACCAGAGACTTGTTTTCACGTGTACTATTATTC TCAACCCATTTGATAAAGGTGGCAACTTTTGCAGCTGAACTGGATTGCTTTTTGTCAATGACATTGGTTGCCAGGCAGAA CAATTATGTCAGGCCTTTGTTGACTGAAGAAAACTTTCTAGAAATTAAAAATGGAAGGCATGTTTTGCAGGAAATGACTG TAGACACATTTATTCCTAATGACACCAAGATGTTGCATGATGGAAGAATTAATATTATCACTGGTCCAAATTTTTCTGGG AAGAGCATCTATATAAAACAGGTGGCTTTAATTGTTTTCCTCTCCCACATTGGTTGTTTTGTTCCTGCTGATGCTGCAAC CGTGGGTCTTACTGATAGAATATTTTGCGCAACAGGAAGCAGACTTATGACTGCAGAACAATCAACATTTATGATTGATC TACATCAAGTTGGGATGATGCTTAGGCATGCCACTTCACGATCTCTGTGTCTGGTGGATGAATTTGGCAAGGGTACTCTT ACAGAAGATGGCACTGGTCTGCTTGCTGGGACCATAAATCACTTTGTCACGTATGATGAACCCCCAAAGGTTTTTGTGTG CACTCATCTCATGGATTTATTGCATGGGCATTCCTTGACTAAGTCTGAGCAGATTATGTTTTACACAATGAGTATACTGA GACCTGACGAAAGTTCCACCCAAATTGAAGACATCGTATTCTTATATAGGTAA
Protein sequence (LotjaGi1g1v0027200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MACIQNGHRIGVSYYDSGLRQLYVLEVWDDGDKGFPVIDLVKYQANPLVIYTSTKCEESFLAALEQSDEAAEAPTVKLMK SSIFSYEQAWHRLIYLRVAGMDDGLNVKERIYFLSSMMNMESEVQVRASGGLLAILENERIVDTLEQKESGNTSITIDSV AEISLNNFLKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSLFGMMNKCVTPMGRRLLRNWFLRPILDLEVLNYRLNSIS FFLCSEELVVSLRETLKSVKDIPHLLKKFDSPSSICTSTDWTALLKSICALLHINKIFEVGISEALQEELKYLNLDIIEK ASSYITTELAYVYELVIGVIDVNRTKEKGYATVVKEGFCDELDELRQIYEEMPEFLEEVSSLELAQLPVLHKDKPVPCIV YIQQIGYLMCFFEEKLEETTLKELVDWEYTFCDADGETKRYFYRTPKTRELDSLLGDIYHKILDMERAITRDLFSRVLLF STHLIKVATFAAELDCFLSMTLVARQNNYVRPLLTEENFLEIKNGRHVLQEMTVDTFIPNDTKMLHDGRINIITGPNFSG KSIYIKQVALIVFLSHIGCFVPADAATVGLTDRIFCATGSRLMTAEQSTFMIDLHQVGMMLRHATSRSLCLVDEFGKGTL TEDGTGLLAGTINHFVTYDEPPKVFVCTHLMDLLHGHSLTKSEQIMFYTMSILRPDESSTQIEDIVFLYR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 710 | 710 | 2.7E-229 | – | |
| PIRSF | 1 | 710 | 710 | 2.1E-82 | ||
| PANTHER | 1 | 710 | 710 | 2.7E-229 | – | |
| SUPERFAMILY | 172 | 508 | 337 | 1.83E-51 | ||
| Pfam | 176 | 500 | 325 | 1.9E-29 | ||
| SMART | 197 | 533 | 337 | 1.1E-42 | ||
| Gene3D | 198 | 500 | 303 | 1.4E-40 | – | |
| Gene3D | 355 | 445 | 91 | 1.4E-40 | – | |
| Pfam | 357 | 457 | 101 | 2.3E-4 | ||
| Gene3D | 509 | 710 | 202 | 6.0E-66 | – | |
| SUPERFAMILY | 509 | 675 | 167 | 2.38E-27 | ||
| CDD | 521 | 710 | 190 | 5.95506E-96 | – | |
| SMART | 548 | 710 | 163 | 5.0E-22 | ||
| Pfam | 552 | 708 | 157 | 1.6E-35 | ||
| ProSitePatterns | 628 | 644 | 17 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Mismatch repair | A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination. | ||
| Molecular function | Mismatched DNA binding | Interacting selectively and non-covalently with double-stranded DNA containing one or more mismatches. |
Expression pattern of LotjaGi1g1v0027200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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