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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Mismatch repair | A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination. | ||
| Molecular function | Mismatched DNA binding | Interacting selectively and non-covalently with double-stranded DNA containing one or more mismatches. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: DNA mismatch repair protein MSH7-like [Cicer arietinum] gi|502163835|ref|XP_004512965.1| | 24 | ||
| – | PREDICTED: DNA mismatch repair protein MSH6-like [Cicer arietinum] gi|502112702|ref|XP_004494416.1| | 15 | ||
| – | PREDICTED: DNA mismatch repair protein MSH7-like [Cicer arietinum] gi|502163835|ref|XP_004512965.1| | 15 | ||
| – | PREDICTED: mutS2 protein-like isoform X2 [Cicer arietinum] gi|502095766|ref|XP_004490532.1| | 16 | ||
| – | PREDICTED: mutS protein homolog 4-like [Glycine max] gi|356540540|ref|XP_003538746.1| | 9 | ||
| – | PREDICTED: mutS2 protein-like isoform 1 [Glycine max] gi|356521349|ref|XP_003529319.1| | 21 | ||
| – | PREDICTED: mutS2 protein-like isoform 1 [Glycine max] gi|356521349|ref|XP_003529319.1| | 21 | ||
| – | PREDICTED: DNA mismatch repair protein Msh2-like [Glycine max] gi|356563103|ref|XP_003549805.1| | 25 | ||
| – | PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Cicer arietinum] gi|502119328|ref|XP_004496581.1| | 25 | ||
| – | DNA mismatch repair protein MutS; TAIR: AT3G20475.1 MUTS-homologue 5; Swiss-Prot: sp|F4JEP5|MSH5_ARATH DNA mismatch repair protein MSH5; TrEMBL-Plants: tr|K7M4I0|K7M4I0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0027200 | 20 | ||
| – | DNA mismatch repair protein MutS; TAIR: AT3G20475.1 MUTS-homologue 5; Swiss-Prot: sp|F4JEP5|MSH5_ARATH DNA mismatch repair protein MSH5; TrEMBL-Plants: tr|K7M4I0|K7M4I0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0027200 | 20 | ||
| – | DNA mismatch repair MUTS family protein; TAIR: AT5G54090.1 DNA mismatch repair protein MutS, type 2; Swiss-Prot: sp|P73625|MUTS2_SYNY3 Endonuclease MutS2; TrEMBL-Plants: tr|I1JH75|I1JH75_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0127700 | 17 | ||
| – | DNA mismatch repair MUTS family protein; TAIR: AT5G54090.1 DNA mismatch repair protein MutS, type 2; Swiss-Prot: sp|P73625|MUTS2_SYNY3 Endonuclease MutS2; TrEMBL-Plants: tr|I1JH75|I1JH75_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0127700 | 17 | ||
| – | DNA mismatch repair protein MutS; TAIR: AT4G02070.1 MUTS homolog 6; Swiss-Prot: sp|O04716|MSH6_ARATH DNA mismatch repair protein MSH6; TrEMBL-Plants: tr|A0A151RYF4|A0A151RYF4_CAJCA DNA mismatch repair protein Msh6-1; Found in the gene: LotjaGi1g1v0760200 | 35 | ||
| – | DNA mismatch repair protein mutS; TAIR: AT3G24495.1 MUTS homolog 7; Swiss-Prot: sp|Q9SMV7|MSH7_ARATH DNA mismatch repair protein MSH7; TrEMBL-Plants: tr|G7KNH7|G7KNH7_MEDTR DNA mismatch repair protein msh6; Found in the gene: LotjaGi2g1v0214200 | 29 | ||
| – | DNA mismatch repair protein mutS; TAIR: AT4G17380.1 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|K7LMU8|K7LMU8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0421600 | 23 | ||
| – | DNA mismatch repair protein mutS, putative; TAIR: AT4G17380.1 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|A0A151TJF2|A0A151TJF2_CAJCA MutS protein isogeny 4; Found in the gene: LotjaGi2g1v0421600 | 20 | ||
| – | DNA mismatch repair protein mutS; TAIR: AT4G17380.2 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|A0A0R0HJU3|A0A0R0HJU3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0421600 | 23 | ||
| – | DNA mismatch repair protein mutS; TAIR: AT4G17380.1 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|K7LMU8|K7LMU8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0421600 | 23 | ||
| – | DNA mismatch repair protein mutS; TAIR: AT4G17380.2 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|A0A0R0HJU3|A0A0R0HJU3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0421600 | 23 | ||
| – | DNA mismatch repair protein MutS2; TAIR: AT1G65070.2 DNA mismatch repair protein MutS, type 2; Swiss-Prot: sp|P73625|MUTS2_SYNY3 Endonuclease MutS2; TrEMBL-Plants: tr|I1KLI9|I1KLI9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0055400 | 24 | ||
| – | DNA mismatch repair protein mutS; TAIR: AT3G18524.1 MUTS homolog 2; Swiss-Prot: sp|O24617|MSH2_ARATH DNA mismatch repair protein MSH2; TrEMBL-Plants: tr|I1MUG2|I1MUG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0263800 | 30 | ||
| – | DNA mismatch repair protein mutS; TAIR: AT3G18524.1 MUTS homolog 2; Swiss-Prot: sp|O24617|MSH2_ARATH DNA mismatch repair protein MSH2; TrEMBL-Plants: tr|I1MUG2|I1MUG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0263800 | 26 | ||
| – | DNA mismatch repair protein mutS; TAIR: AT4G25540.1 homolog of DNA mismatch repair protein MSH3; Swiss-Prot: sp|O65607|MSH3_ARATH DNA mismatch repair protein MSH3; TrEMBL-Plants: tr|A0A072VPI7|A0A072VPI7_MEDTR DNA mismatch repair MSH3-like protein; Found in the gene: LotjaGi5g1v0301900 | 28 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 4.17 |