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GO:0030983

View this GO term in other databases

Overview

Field Value
Namespace Molecular function
Short description Mismatched DNA binding
Full defintion Interacting selectively and non-covalently with double-stranded DNA containing one or more mismatches.
Subterm of

Relationships

The relationship of GO:0030983 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCmah

Associated Lotus transcripts 42

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0104059.1
– PREDICTED: mutS protein homolog 5-like [Glycine max] gi|356553565|ref|XP_003545125.1|
GO terms
3
Lj0g3v0130849.1
– PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like [Cicer arietinum] gi|502122529|ref|XP_004497789.1|
GO terms
3
Lj0g3v0130859.1
– PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like [Cicer arietinum] gi|502122529|ref|XP_004497789.1|
GO terms
3
Lj0g3v0155879.1
– PREDICTED: DNA mismatch repair protein Mlh1-like [Glycine max] gi|356507690|ref|XP_003522597.1|
GO terms
3
Lj1g3v0246860.1
– PREDICTED: DNA mismatch repair protein MSH7-like [Cicer arietinum] gi|502163835|ref|XP_004512965.1|
GO terms
3
Lj1g3v4862830.1
– PREDICTED: DNA mismatch repair protein Msh6-1-like [Glycine max] gi|356572787|ref|XP_003554547.1|
GO terms
3
Lj1g3v4862840.1
– PREDICTED: DNA mismatch repair protein MSH6-like [Cicer arietinum] gi|502112702|ref|XP_004494416.1|
GO terms
3
Lj2g3v0777050.1
– PREDICTED: DNA mismatch repair protein MSH7-like [Cicer arietinum] gi|502163835|ref|XP_004512965.1|
GO terms
3
Lj2g3v0777050.2
– PREDICTED: DNA mismatch repair protein MSH7-like [Cicer arietinum] gi|502163835|ref|XP_004512965.1|
GO terms
3
Lj2g3v2001370.1
– PREDICTED: DNA mismatch repair protein MSH4-like isoform X2 [Cicer arietinum] gi|502160324|ref|XP_004511708.1|
GO terms
3
Lj2g3v2195520.1
– PREDICTED: mutS2 protein-like isoform X2 [Cicer arietinum] gi|502095766|ref|XP_004490532.1|
GO terms
6
Lj2g3v2195520.2
– PREDICTED: mutS2 protein-like isoform X2 [Cicer arietinum] gi|502095766|ref|XP_004490532.1|
GO terms
6
Lj2g3v2195520.3
– PREDICTED: mutS2 protein-like isoform X2 [Cicer arietinum] gi|502095766|ref|XP_004490532.1|
GO terms
3
Lj2g3v3184230.2
– DNA mismatch repair protein mutS [Medicago truncatula] gi|357494573|ref|XP_003617575.1|
GO terms
3
Lj3g3v0582180.1
– PREDICTED: mutS protein homolog 4-like [Glycine max] gi|356540540|ref|XP_003538746.1|
GO terms
3
Lj3g3v1957990.1
– PREDICTED: DNA mismatch repair protein MLH1-like [Cicer arietinum] gi|502127149|ref|XP_004499581.1|
GO terms
3
Lj4g3v0451120.1
– PREDICTED: mutS2 protein-like isoform 1 [Glycine max] gi|356521349|ref|XP_003529319.1|
GO terms
6
Lj4g3v0451120.2
– PREDICTED: mutS2 protein-like isoform 1 [Glycine max] gi|356521349|ref|XP_003529319.1|
GO terms
6
Lj4g3v1787050.1
– PREDICTED: DNA mismatch repair protein Msh2-like [Glycine max] gi|356563103|ref|XP_003549805.1|
GO terms
3
Lj4g3v1787050.2
– PREDICTED: DNA mismatch repair protein MSH2-like [Cicer arietinum] gi|502151706|ref|XP_004508573.1|
GO terms
3
Lj5g3v1631040.1
– PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max] gi|356502864|ref|XP_003520235.1|
GO terms
3
Lj5g3v2013910.1
– PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Cicer arietinum] gi|502119328|ref|XP_004496581.1|
GO terms
3
LotjaGi1g1v0027200.1
– DNA mismatch repair protein MutS; TAIR: AT3G20475.1 MUTS-homologue 5; Swiss-Prot: sp|F4JEP5|MSH5_ARATH DNA mismatch repair protein MSH5; TrEMBL-Plants: tr|K7M4I0|K7M4I0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0027200
GO terms
3
LotjaGi1g1v0027200.2
– DNA mismatch repair protein MutS; TAIR: AT3G20475.1 MUTS-homologue 5; Swiss-Prot: sp|F4JEP5|MSH5_ARATH DNA mismatch repair protein MSH5; TrEMBL-Plants: tr|K7M4I0|K7M4I0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0027200
GO terms
3
LotjaGi1g1v0127700.1
– DNA mismatch repair MUTS family protein; TAIR: AT5G54090.1 DNA mismatch repair protein MutS, type 2; Swiss-Prot: sp|P73625|MUTS2_SYNY3 Endonuclease MutS2; TrEMBL-Plants: tr|I1JH75|I1JH75_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0127700
GO terms
6
LotjaGi1g1v0127700.2
– DNA mismatch repair MUTS family protein; TAIR: AT5G54090.1 DNA mismatch repair protein MutS, type 2; Swiss-Prot: sp|P73625|MUTS2_SYNY3 Endonuclease MutS2; TrEMBL-Plants: tr|I1JH75|I1JH75_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0127700
GO terms
6
LotjaGi1g1v0760200.1
– DNA mismatch repair protein MutS; TAIR: AT4G02070.1 MUTS homolog 6; Swiss-Prot: sp|O04716|MSH6_ARATH DNA mismatch repair protein MSH6; TrEMBL-Plants: tr|A0A151RYF4|A0A151RYF4_CAJCA DNA mismatch repair protein Msh6-1; Found in the gene: LotjaGi1g1v0760200
GO terms
3
LotjaGi2g1v0214200.1
– DNA mismatch repair protein mutS; TAIR: AT3G24495.1 MUTS homolog 7; Swiss-Prot: sp|Q9SMV7|MSH7_ARATH DNA mismatch repair protein MSH7; TrEMBL-Plants: tr|G7KNH7|G7KNH7_MEDTR DNA mismatch repair protein msh6; Found in the gene: LotjaGi2g1v0214200
GO terms
3
LotjaGi2g1v0354500.1
– DNA mismatch repair protein mutL; TAIR: AT4G35520.2 MUTL protein homolog 3; Swiss-Prot: sp|F4JN26|MLH3_ARATH DNA mismatch repair protein MLH3; TrEMBL-Plants: tr|A0A0B2RU55|A0A0B2RU55_GLYSO DNA mismatch repair protein Mlh3; Found in the gene: LotjaGi2g1v0354500
GO terms
3
LotjaGi2g1v0421600.1
– DNA mismatch repair protein mutS; TAIR: AT4G17380.1 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|K7LMU8|K7LMU8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0421600
GO terms
3
LotjaGi2g1v0421600.2
– DNA mismatch repair protein mutS, putative; TAIR: AT4G17380.1 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|A0A151TJF2|A0A151TJF2_CAJCA MutS protein isogeny 4; Found in the gene: LotjaGi2g1v0421600
GO terms
3
LotjaGi2g1v0421600.3
– DNA mismatch repair protein mutS; TAIR: AT4G17380.2 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|A0A0R0HJU3|A0A0R0HJU3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0421600
GO terms
3
LotjaGi2g1v0421600.4
– DNA mismatch repair protein mutS; TAIR: AT4G17380.1 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|K7LMU8|K7LMU8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0421600
GO terms
3
LotjaGi2g1v0421600.5
– DNA mismatch repair protein mutS; TAIR: AT4G17380.2 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|A0A0R0HJU3|A0A0R0HJU3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0421600
GO terms
3
LotjaGi3g1v0335500.1
– DNA mismatch repair protein MutL; TAIR: AT4G09140.1 MUTL-homologue 1; Swiss-Prot: sp|Q9ZRV4|MLH1_ARATH DNA mismatch repair protein MLH1; TrEMBL-Plants: tr|I1JZC3|I1JZC3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0335500
GO terms
3
LotjaGi3g1v0335500.2
– DNA mismatch repair protein MutL; TAIR: AT4G09140.1 MUTL-homologue 1; Swiss-Prot: sp|Q9ZRV4|MLH1_ARATH DNA mismatch repair protein MLH1; TrEMBL-Plants: tr|I1JZC3|I1JZC3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0335500
GO terms
3
LotjaGi4g1v0055400.1
– DNA mismatch repair protein MutS2; TAIR: AT1G65070.2 DNA mismatch repair protein MutS, type 2; Swiss-Prot: sp|P73625|MUTS2_SYNY3 Endonuclease MutS2; TrEMBL-Plants: tr|I1KLI9|I1KLI9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0055400
GO terms
6
LotjaGi4g1v0263800.1
– DNA mismatch repair protein mutS; TAIR: AT3G18524.1 MUTS homolog 2; Swiss-Prot: sp|O24617|MSH2_ARATH DNA mismatch repair protein MSH2; TrEMBL-Plants: tr|I1MUG2|I1MUG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0263800
GO terms
3
LotjaGi4g1v0263800.2
– DNA mismatch repair protein mutS; TAIR: AT3G18524.1 MUTS homolog 2; Swiss-Prot: sp|O24617|MSH2_ARATH DNA mismatch repair protein MSH2; TrEMBL-Plants: tr|I1MUG2|I1MUG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0263800
GO terms
3
LotjaGi5g1v0251500.1
– MutL DNA mismatch repair protein; TAIR: AT4G02460.1 DNA mismatch repair protein; Swiss-Prot: sp|Q941I6|PMS1_ARATH DNA mismatch repair protein PMS1; TrEMBL-Plants: tr|I1JFI1|I1JFI1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0251500
GO terms
3
LotjaGi5g1v0301900.1
– DNA mismatch repair protein mutS; TAIR: AT4G25540.1 homolog of DNA mismatch repair protein MSH3; Swiss-Prot: sp|O65607|MSH3_ARATH DNA mismatch repair protein MSH3; TrEMBL-Plants: tr|A0A072VPI7|A0A072VPI7_MEDTR DNA mismatch repair MSH3-like protein; Found in the gene: LotjaGi5g1v0301900
GO terms
3
LotjaGi6g1v0010300.1
– DNA mismatch repair protein mutS; TAIR: AT3G24320.1 MUTL protein homolog 1; Swiss-Prot: sp|Q84LK0|MSH1_ARATH DNA mismatch repair protein MSH1, mitochondrial; TrEMBL-Plants: tr|G7I6Q0|G7I6Q0_MEDTR DNA mismatch repair protein; Found in the gene: LotjaGi6g1v0010300
GO terms
3

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0030983
Molecular function Mismatched DNA binding 1 2.38