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SM00534

Source: SMART

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006298
Biological process Mismatch repair A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.
Subterm of
GO:0030983
Molecular function Mismatched DNA binding Interacting selectively and non-covalently with double-stranded DNA containing one or more mismatches.
Subterm of

Associated Lotus transcripts 29

Transcript Name Description Predicted domains Domain count
Lj0g3v0104059.1
– PREDICTED: mutS protein homolog 5-like [Glycine max] gi|356553565|ref|XP_003545125.1|
Domains
10
Lj0g3v0130849.1
– PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like [Cicer arietinum] gi|502122529|ref|XP_004497789.1|
Domains
11
Lj1g3v0246860.1
– PREDICTED: DNA mismatch repair protein MSH7-like [Cicer arietinum] gi|502163835|ref|XP_004512965.1|
Domains
24
Lj1g3v4862840.1
– PREDICTED: DNA mismatch repair protein MSH6-like [Cicer arietinum] gi|502112702|ref|XP_004494416.1|
Domains
15
Lj2g3v0777050.1
– PREDICTED: DNA mismatch repair protein MSH7-like [Cicer arietinum] gi|502163835|ref|XP_004512965.1|
Domains
15
Lj2g3v2195520.1
– PREDICTED: mutS2 protein-like isoform X2 [Cicer arietinum] gi|502095766|ref|XP_004490532.1|
Domains
15
Lj2g3v2195520.2
– PREDICTED: mutS2 protein-like isoform X2 [Cicer arietinum] gi|502095766|ref|XP_004490532.1|
Domains
16
Lj2g3v2195520.3
– PREDICTED: mutS2 protein-like isoform X2 [Cicer arietinum] gi|502095766|ref|XP_004490532.1|
Domains
11
Lj4g3v0451120.1
– PREDICTED: mutS2 protein-like isoform 1 [Glycine max] gi|356521349|ref|XP_003529319.1|
Domains
21
Lj4g3v0451120.2
– PREDICTED: mutS2 protein-like isoform 1 [Glycine max] gi|356521349|ref|XP_003529319.1|
Domains
21
Lj4g3v1787050.1
– PREDICTED: DNA mismatch repair protein Msh2-like [Glycine max] gi|356563103|ref|XP_003549805.1|
Domains
25
Lj4g3v1787050.2
– PREDICTED: DNA mismatch repair protein MSH2-like [Cicer arietinum] gi|502151706|ref|XP_004508573.1|
Domains
11
Lj5g3v2013910.1
– PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Cicer arietinum] gi|502119328|ref|XP_004496581.1|
Domains
25
LotjaGi1g1v0027200.1
– DNA mismatch repair protein MutS; TAIR: AT3G20475.1 MUTS-homologue 5; Swiss-Prot: sp|F4JEP5|MSH5_ARATH DNA mismatch repair protein MSH5; TrEMBL-Plants: tr|K7M4I0|K7M4I0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0027200
Domains
20
LotjaGi1g1v0027200.2
– DNA mismatch repair protein MutS; TAIR: AT3G20475.1 MUTS-homologue 5; Swiss-Prot: sp|F4JEP5|MSH5_ARATH DNA mismatch repair protein MSH5; TrEMBL-Plants: tr|K7M4I0|K7M4I0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0027200
Domains
20
LotjaGi1g1v0127700.1
– DNA mismatch repair MUTS family protein; TAIR: AT5G54090.1 DNA mismatch repair protein MutS, type 2; Swiss-Prot: sp|P73625|MUTS2_SYNY3 Endonuclease MutS2; TrEMBL-Plants: tr|I1JH75|I1JH75_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0127700
Domains
17
LotjaGi1g1v0127700.2
– DNA mismatch repair MUTS family protein; TAIR: AT5G54090.1 DNA mismatch repair protein MutS, type 2; Swiss-Prot: sp|P73625|MUTS2_SYNY3 Endonuclease MutS2; TrEMBL-Plants: tr|I1JH75|I1JH75_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0127700
Domains
17
LotjaGi1g1v0760200.1
– DNA mismatch repair protein MutS; TAIR: AT4G02070.1 MUTS homolog 6; Swiss-Prot: sp|O04716|MSH6_ARATH DNA mismatch repair protein MSH6; TrEMBL-Plants: tr|A0A151RYF4|A0A151RYF4_CAJCA DNA mismatch repair protein Msh6-1; Found in the gene: LotjaGi1g1v0760200
Domains
35
LotjaGi2g1v0214200.1
– DNA mismatch repair protein mutS; TAIR: AT3G24495.1 MUTS homolog 7; Swiss-Prot: sp|Q9SMV7|MSH7_ARATH DNA mismatch repair protein MSH7; TrEMBL-Plants: tr|G7KNH7|G7KNH7_MEDTR DNA mismatch repair protein msh6; Found in the gene: LotjaGi2g1v0214200
Domains
29
LotjaGi2g1v0421600.1
– DNA mismatch repair protein mutS; TAIR: AT4G17380.1 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|K7LMU8|K7LMU8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0421600
Domains
23
LotjaGi2g1v0421600.2
– DNA mismatch repair protein mutS, putative; TAIR: AT4G17380.1 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|A0A151TJF2|A0A151TJF2_CAJCA MutS protein isogeny 4; Found in the gene: LotjaGi2g1v0421600
Domains
20
LotjaGi2g1v0421600.3
– DNA mismatch repair protein mutS; TAIR: AT4G17380.2 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|A0A0R0HJU3|A0A0R0HJU3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0421600
Domains
23
LotjaGi2g1v0421600.4
– DNA mismatch repair protein mutS; TAIR: AT4G17380.1 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|K7LMU8|K7LMU8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0421600
Domains
23
LotjaGi2g1v0421600.5
– DNA mismatch repair protein mutS; TAIR: AT4G17380.2 MUTS-like protein 4; Swiss-Prot: sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4; TrEMBL-Plants: tr|A0A0R0HJU3|A0A0R0HJU3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0421600
Domains
23
LotjaGi4g1v0055400.1
– DNA mismatch repair protein MutS2; TAIR: AT1G65070.2 DNA mismatch repair protein MutS, type 2; Swiss-Prot: sp|P73625|MUTS2_SYNY3 Endonuclease MutS2; TrEMBL-Plants: tr|I1KLI9|I1KLI9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0055400
Domains
24
LotjaGi4g1v0263800.1
– DNA mismatch repair protein mutS; TAIR: AT3G18524.1 MUTS homolog 2; Swiss-Prot: sp|O24617|MSH2_ARATH DNA mismatch repair protein MSH2; TrEMBL-Plants: tr|I1MUG2|I1MUG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0263800
Domains
30
LotjaGi4g1v0263800.2
– DNA mismatch repair protein mutS; TAIR: AT3G18524.1 MUTS homolog 2; Swiss-Prot: sp|O24617|MSH2_ARATH DNA mismatch repair protein MSH2; TrEMBL-Plants: tr|I1MUG2|I1MUG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0263800
Domains
26
LotjaGi5g1v0301900.1
– DNA mismatch repair protein mutS; TAIR: AT4G25540.1 homolog of DNA mismatch repair protein MSH3; Swiss-Prot: sp|O65607|MSH3_ARATH DNA mismatch repair protein MSH3; TrEMBL-Plants: tr|A0A072VPI7|A0A072VPI7_MEDTR DNA mismatch repair MSH3-like protein; Found in the gene: LotjaGi5g1v0301900
Domains
28
LotjaGi6g1v0010300.1
– DNA mismatch repair protein mutS; TAIR: AT3G24320.1 MUTL protein homolog 1; Swiss-Prot: sp|Q84LK0|MSH1_ARATH DNA mismatch repair protein MSH1, mitochondrial; TrEMBL-Plants: tr|G7I6Q0|G7I6Q0_MEDTR DNA mismatch repair protein; Found in the gene: LotjaGi6g1v0010300
Domains
20

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd03243 CDD 1 3.45