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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0328100 |
| Transcript ID | LotjaGi1g1v0328100.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp|O04921|HEMH2_ARATH Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr|V7AZZ3|V7AZZ3_PHAVU Ferrochelatase; Found in the gene: LotjaGi1g1v0328100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:78274342..78280103) extracted from Lotus japonicus Gifu genome v1.2.
TACTTGCTTCTTCTTTCACCTAACTCCCATGGTGCTGTAAAAGTTGCCACCAGTAACAGCTTCCATTCTCCTCCATAATA TCTGGAGTTTGGTAAAGTTATTATCTTTTCGCCAAATTGATTTCTGGGTAGCTCTTCTTTTATCACTCAACTTCCCCTAT CAACCCTCATTTTTGTTGCAAAATGCATCAATATCAAGCTATGAACTCTCCAGCTTCAATTCATGCCCCTTCATTACCAT CTTCTTCTTCTTCCTCCTGTTCGCATCGTTCTCCTCCATGCCTCACTCATGCTTCTCGCAATTTCAAGTTTCCCTTGTAA GTGTTCCTTTTATCAGAATTCTGATGTTTTATTTTATCTGTTTGTGTTTTTTGGACCTGGGTCATGGATTTCTCAGTACC CTTTTATTAAAGTAAGGATTTTTACTTTATTTTTCTGGAATCCAACAACATTTCCATTTTTTCCCTTGAATGAACTCATA ACAGACTTTAAATGTAGTAGTCAATTGATTTTGAAACACCCTAGAGGATGTGATGTCCTGTTCCTAAAACATGAGTTTTT GGGACTGGAACTTTGAGATGCCATTTCAGGAAATGTTTCATCTCACAATCTACATTATAAGTTACTTGGTTGTTTGCCTA AGGTTATGAATATTAGTTACCACTTGCCAATGTTAACTATACAACATAACCAGTTAAGCTTAATTTTAGAATGTAATTAA CCTATAACTTAAATGTAGGTTTACAATAGGAAATATCCTTAGAAGAAGATACTCTTTGTTCCTTCTGAAGTTTACCTATA TTGTCCATGTGGACCATGAGCATAAATTTTTAGTATTTTTGAGTTGTCATGATTCATGAACATGATTGAACTCGAGTTGC ATACTAGCATTTTTATTGCCTTCTCGAAGCTTTGAAGTGCTAGAAATTTCATCTAATAATTCCTTTGCTATTGTACATCC TAGCTCAAAAGTTCCTTGCCTTCTAAACTTGAATGTGACTTATGCTAATACTTTTTGTTTTAATGTGGAAAAAGATGCTT TAATCATATAAAATTTTCCTTCTATATGTCATTTATTTTATCACTAGATGTCTCCTGAAGCGTATATCTTTTTCGCTTTC ATAGGTCGTTGCCACAGCCAATGTTTACTTCCCAAAAGATTTACTGCTGTTCTGGAGCCGATATGGAGGCGTCTGTTAAC ACTAATCCCATGAAACTTCACATAGAAACCAGATGTTCTCCGCGATGGTTTGAAGCACAACCCTTGATTTCTAACCAATC ACTCAACAAAAACTTGTTCTCAGTGCGAGCTTTAGCAACTCCAACAGCTCAAGATGTTTCTGATACAACTCTTATTGGTG ATGACAAGACTGGAGTGTTATTACTAAACCTTGGAGGTCCAGAGACTTTAGAAGATGTGCAGCCTTTTTTGTTTAACCTT TTTGCTGACCCGGTAATAGTAATACTCACACACTTCACTTTGAGCTGTCCTGTTCAACCCTCTCTGTTCCTTTAGGTTGA GATTGTCCTACACTAACAATTTCTCATGATATTAGTTATGTTTTATGTATAATCACACAGGATATTATACGATTTCCTAC CGTATTTAGTTTTCTTCAAAAGCCATTAGCCCAATTTATATCTGTTGCAAGGGCCCCAAAGAGCAGAGAAGGCTATGCTT CAATTGGTGGGGGGTCTCCTCTTAGACGTATAACTGACGAACAGGCATGGGTCTTCCTGCTATCTTTTCCTTTTTATTTA CTCTCGAAATCATACATAGGAATTGGAGACTTCAAATTTCAATTGTCGGAAATTGAACTAATCATATTTGTGAAGGAGTT CTTCTAGGATTTGTTACCCTGTATATGTACCTGATGTATGAAAATTTTCTATTGCCAATTTTCCCAGCTTTAGATTTTGC AAAGCGAAATAATAGCACAACAGTATTCCAAAAACTGCAAAGATCTTGTAATAAGTCAATGTCATGTATATTTTAATTCA TGCAGCTGTTGTAGTACGAATTACTTTTATGTGGTTACTGCTGAATTTTTTTTTTTTTTCTCTCCAGGGAACTTATATTA ACCATCTTGTACAATTTTGTCACCTCATCCTTAATCTTTTTACAACCATTTCAATCAAACTTTCGATATTTTCACATATC CATTGACATTTTACAGATTTTCATTTTTTTTTTGCTGATGTTTTCAAAACTTTCCAATGATGATTTGGGATACGTAAGAA CCATCATTCCATTAAGTTCTCGTTTGACTCTATTATTTTTCTACCTTACTGCACAGGCTGAAGAGTTGAGGAAATATCTT TGGGCAAAGAATGTCCCTGCTAAAGTGTATGTTGGCATGCGGTACTGGCATCCATTCACTGAAGAAGCTATTGAACAGGC ATTTGATCATCCTTTTCTAATTGCATAATGTAAACTTGAATAGAATTTGATCAACATTATGCCATTGGTGGATTTTCTCA GTCTCACCTGTTTTCATCCTACAGTTTGAGTTAAAAAATGTTACTGTATGCTTAATTCTTAAATAAAGAAGCATGCAAAA TTTTCAAAATAGGGCTACTCAAAGCAATTGTTTTTAATCTGCTTTATTGAGTGGCTTGATGCAGCCGCTACTTTTATCCT TATGAAGGTATTTCGTCATGGATAGCTTAGATCTGAGTTCTAAACTTGTTGTTAACCCACTGGTACAACCGTACCAGTTA GCTTGAATTATCTTTGTGCACACAATCACACCTGTCAATGTGAAAAAAAATTGAGCTCTGACTATTAGAAACTATTGCTT TTCCTAAGGTATAAAATTTGTTCTTGTTGGGACTATTGAAGGTTGGTATGTCAAAAACTCATTCAATTTTATGCAGCATA ACAGGTTATTGTATGCTTCTTTCTTTAAACTGATTCCTGCCTTAAAGTTATGTCAAAGTCATTTGCCTTTGAAAGGTGAA CTACTATTTTGTGGGAAGTAATAATGCAGGCACAGAAACAGGTCATGTTAATAGTATTTTTATTTTTAAAATCTCTTGAT AAAAGAAGAAATTTTTAAAATGATCGAACAAACCAGGAATTCCAAAAGTTAGATCTTGTAGTTTTATTGGTACAATTTTA CATAATTTGATCTGTTTGTGACTTCTTCCAAACCTGTTTATAATTTAGTTTTCCTTTAAATAAACTGTTCAGATTAAAAG GGATGGAATTACAAAGCTTGTCGTTCTTCCACTTTATCCACAATTTTCCATATCAACCAGTGGCTCAAGCTTACGCCTAC TAGAGAATATATTCCGGTGATTACTATAAGAATATTGTTATCACCTTTATTATACATCAAATATATAAATTATTGAGCAT TATTTAATGTTATGAATTGTTAATTGGTTCTTCAGAGAGGATGAGTATCTGGTCAACATGCAGCACACAGTAATACCTTC GTGGTATCAACGTGAAGGGTACATAAAAGCCATGGCAAATTTAATTGAAAAGGAGCTGAAGAGTTTTGACTGCCCCGAGG AGGTGGAGTTTTTTTTTTCTTTTTCTTTGTTAGTTTTAATGACTTAGAAAAGAAAGGGTGGTTCCTTGAATTTTTCTGTT GTAATTGACTAATTGTCATTCTTATCGTATAAATGAAAGTTAGCATCATACTTTACACAGTCAACATTTCAGTTATTTCT GGTTTGGGTAACAGAAAGAGTAACCTACCATACTTGGTTTGATTAGCATTTATGGTATCTTGGAGATATTGGAAATTTGG AATGCCATTATGCCCAAAAAAATTGTTGTTTCATAGAGATTTCTATGTCAACAATTCTGGTTATTCCTTTTAATCTTTGT TTGGTGTTGCTGAGGAGTACTTCCTGCAATCAAGGTACTCTTGTTTAACTGTTAGCGTGTATGCTTCTGAGCCCGAGCAG TTCATGCCCAGTGCAGGTCATGATGTTCTTTAGTGCACATGGCGTGCCTCTTGCTTACGTGGAAGAAGCTGGCGATCCAT ACAAGGCAGAGATGGAGGAATGTGTGGATTTGATCATGGAAGAACTTGAGACAAGGAAGATAACTAATGCCAGCATCCTT GCTTATCAGGTAACTACTTTGTCTTTCTGTGATTGTTTCTTCTGTTTCGTCAACTTTTTCTTAGATTGTGTTAGTTTACT ACTATATTGTCCTCTAATAAGTCATAATTGGAAATTCCATCAATTGAATGCTCCACTAGGCAATAATGTTTTGAGCAGAT CATGAAGTTCACACTGCTTTCAATACCACTTTCTATGTATTTCTAACAATTGACTATAATTCTTTTTACAGAGTAGAGTT GGACCAGTCGAATGGTTAAGACCCTATACAGACGAAACAATAGTTGAACTTGGAAAAAAGGGAGTGAAAAGTCTGCTGGC TGTTCCAATTAGGTAAATGTTAGTTTACTCCTATCTCAATCATCTTCCTTCTTTCTTTATCTCTCTCCCCCTCTTTCTCA AACCTGCAAACAGAGTAAGCGACTAATATTTTTTCACTCGTGCTTAATTCACAGCTTTGTCAGTGAGCATATTGAAACTC TTGAAGAAATTGATGTTGAGTACAAAGAATTGGCTCTACAATCCGGTATAGAAAAGTGGGGCCGTGTTCCAGCTCTAGGA TGTGAACCCAGCTTCATTTCTGATTTGGCAGACGCCGTTATTGAGAGTCTCCCATATGTTGGTGCCATGGCCGTTTCAGA CCTTGAAGCACGACAGGTACTCTTTCCAACTCCCATATACACATATCTTTCATACAAGAAAATAATTATCTACTGTTCTC CTTGGAGTTGTTCCAATTTTATCGGATTTCCCCTAAGGGTATTGTAAGTGGCATAGTGGTCTTGCTTTGATTATGTTTAA ATTGTTCCCACAATCTGTTGTTTGATCGAGCTCGATGACATTGCCGACATCACTTAGTGGATAAGGATTTTGGCGTTGTT GCTGTAGTTCTCTTTGGAGTTGTTATTGAAAGACACACTTCTTCCCTTTCAAACACTTCTCATAGAGATTTTTGTAATAG TATATGTTGGAGTTACATTGTTGCATCTTGTGATCTAATAAAAAAGTTTGGACTCTTTGGCAGTCATTGGTTCCCTTGGG AAGTGTAGAAGAGTTATTGGCTACATACGACTCGAGACGTAGGGAGTTGCCACCGCCATTTGTAGTGTGGGAATGGGGTT GGACAAAGAGTTCTGAAACTTGGAATGGAAGAGTAGCTATGCTGGCTTTCCTGCTTCTTATGTTTTTTGAAGTCACTACA GAAGGGAGTTTTCTGCACCAGTGGGGAATATTGCCCTCACTTAGGTGAATGAACCTCCCCATGCTCTCAAAGACGGTGGA ATATTATTTTGAGTTCAATTTTGATCTGTATAGCTTTTTCCCCCCACTATGATCAAGTCATATCATATACAATTTTAAAG TTTTTGACCTTTCAAGTGGTTATCAATTATAACATAGCTCTGCCTATGTTGTGTTACATAGCTGGTCCAAAAACCTGAAA TAATGAGGCTGTATTAGTCTGTTGACCTAAAACCTTGTCAAGTCTTCATGACATTGTGACATGATAATATTGTGTGTAAA AACTTCACGGTGGATCAAAATAAATCCGTTCAGTTTCTGAATATAATTTTATATGACAGTTTCTTACTGATTTTTTGTTG TTATTTTTGTAACAAAGATAGTAATACAAGGGTCAAGGGATGTTGCCTCAATTCTATGTTATGGGTTATTCACCAAAAAA GA
CDS sequence (LotjaGi1g1v0328100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATCAATATCAAGCTATGAACTCTCCAGCTTCAATTCATGCCCCTTCATTACCATCTTCTTCTTCTTCCTCCTGTTC GCATCGTTCTCCTCCATGCCTCACTCATGCTTCTCGCAATTTCAAGTTTCCCTTGTCGTTGCCACAGCCAATGTTTACTT CCCAAAAGATTTACTGCTGTTCTGGAGCCGATATGGAGGCGTCTGTTAACACTAATCCCATGAAACTTCACATAGAAACC AGATGTTCTCCGCGATGGTTTGAAGCACAACCCTTGATTTCTAACCAATCACTCAACAAAAACTTGTTCTCAGTGCGAGC TTTAGCAACTCCAACAGCTCAAGATGTTTCTGATACAACTCTTATTGGTGATGACAAGACTGGAGTGTTATTACTAAACC TTGGAGGTCCAGAGACTTTAGAAGATGTGCAGCCTTTTTTGTTTAACCTTTTTGCTGACCCGGATATTATACGATTTCCT ACCGTATTTAGTTTTCTTCAAAAGCCATTAGCCCAATTTATATCTGTTGCAAGGGCCCCAAAGAGCAGAGAAGGCTATGC TTCAATTGGTGGGGGGTCTCCTCTTAGACGTATAACTGACGAACAGGCTGAAGAGTTGAGGAAATATCTTTGGGCAAAGA ATGTCCCTGCTAAAGTGTATGTTGGCATGCGGTACTGGCATCCATTCACTGAAGAAGCTATTGAACAGATTAAAAGGGAT GGAATTACAAAGCTTGTCGTTCTTCCACTTTATCCACAATTTTCCATATCAACCAGTGGCTCAAGCTTACGCCTACTAGA GAATATATTCCGAGAGGATGAGTATCTGGTCAACATGCAGCACACAGTAATACCTTCGTGGTATCAACGTGAAGGGTACA TAAAAGCCATGGCAAATTTAATTGAAAAGGAGCTGAAGAGTTTTGACTGCCCCGAGGAGGTCATGATGTTCTTTAGTGCA CATGGCGTGCCTCTTGCTTACGTGGAAGAAGCTGGCGATCCATACAAGGCAGAGATGGAGGAATGTGTGGATTTGATCAT GGAAGAACTTGAGACAAGGAAGATAACTAATGCCAGCATCCTTGCTTATCAGAGTAGAGTTGGACCAGTCGAATGGTTAA GACCCTATACAGACGAAACAATAGTTGAACTTGGAAAAAAGGGAGTGAAAAGTCTGCTGGCTGTTCCAATTAGCTTTGTC AGTGAGCATATTGAAACTCTTGAAGAAATTGATGTTGAGTACAAAGAATTGGCTCTACAATCCGGTATAGAAAAGTGGGG CCGTGTTCCAGCTCTAGGATGTGAACCCAGCTTCATTTCTGATTTGGCAGACGCCGTTATTGAGAGTCTCCCATATGTTG GTGCCATGGCCGTTTCAGACCTTGAAGCACGACAGTCATTGGTTCCCTTGGGAAGTGTAGAAGAGTTATTGGCTACATAC GACTCGAGACGTAGGGAGTTGCCACCGCCATTTGTAGTGTGGGAATGGGGTTGGACAAAGAGTTCTGAAACTTGGAATGG AAGAGTAGCTATGCTGGCTTTCCTGCTTCTTATGTTTTTTGAAGTCACTACAGAAGGGAGTTTTCTGCACCAGTGGGGAA TATTGCCCTCACTTAGGTGA
Protein sequence (LotjaGi1g1v0328100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHQYQAMNSPASIHAPSLPSSSSSSCSHRSPPCLTHASRNFKFPLSLPQPMFTSQKIYCCSGADMEASVNTNPMKLHIET RCSPRWFEAQPLISNQSLNKNLFSVRALATPTAQDVSDTTLIGDDKTGVLLLNLGGPETLEDVQPFLFNLFADPDIIRFP TVFSFLQKPLAQFISVARAPKSREGYASIGGGSPLRRITDEQAEELRKYLWAKNVPAKVYVGMRYWHPFTEEAIEQIKRD GITKLVVLPLYPQFSISTSGSSLRLLENIFREDEYLVNMQHTVIPSWYQREGYIKAMANLIEKELKSFDCPEEVMMFFSA HGVPLAYVEEAGDPYKAEMEECVDLIMEELETRKITNASILAYQSRVGPVEWLRPYTDETIVELGKKGVKSLLAVPISFV SEHIETLEEIDVEYKELALQSGIEKWGRVPALGCEPSFISDLADAVIESLPYVGAMAVSDLEARQSLVPLGSVEELLATY DSRRRELPPPFVVWEWGWTKSSETWNGRVAMLAFLLLMFFEVTTEGSFLHQWGILPSLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 508 | 508 | - | – | |
| PANTHER | 96 | 528 | 433 | 2.3E-206 | ||
| TIGRFAM | 125 | 450 | 326 | 1.8E-112 | ||
| SUPERFAMILY | 125 | 456 | 332 | 3.92E-106 | – | |
| Hamap | 125 | 450 | 326 | 36.391 | ||
| Gene3D | 126 | 450 | 325 | 7.6E-123 | – | |
| Pfam | 126 | 449 | 324 | 2.4E-110 | ||
| CDD | 127 | 289 | 163 | 5.92516E-70 | ||
| Gene3D | 288 | 431 | 144 | 7.6E-123 | – | |
| CDD | 295 | 433 | 139 | 4.01437E-56 | ||
| ProSitePatterns | 316 | 337 | 22 | - | ||
| SUPERFAMILY | 494 | 534 | 41 | 5.1E-10 | – | |
| Phobius | 509 | 529 | 21 | - | – | |
| Phobius | 530 | 539 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ferrochelatase activity | Catalysis of the reaction: protoheme = Fe(2+) + protoporphyrin IX. | ||
| Biological process | Heme biosynthetic process | The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors. |
Expression pattern of LotjaGi1g1v0328100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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